Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIR:A41:A49
Extra
PDB:
ATOM 1 O3' C A 40 -3.138 55.809 1.976 1.00 36.52 O
ATOM 2 P A A 41 -3.105 54.283 2.479 1.00 34.69 P
ATOM 3 OP1 A A 41 -1.733 53.770 2.254 1.00 34.76 O
ATOM 4 OP2 A A 41 -4.258 53.589 1.861 1.00 34.54 O
ATOM 5 O5' A A 41 -3.354 54.376 4.060 1.00 33.27 O
ATOM 6 C5' A A 41 -2.314 54.786 4.945 1.00 31.05 C
ATOM 7 C4' A A 41 -2.290 53.920 6.194 1.00 30.09 C
ATOM 8 O4' A A 41 -3.548 54.028 6.913 1.00 29.02 O
ATOM 9 C3' A A 41 -2.063 52.426 5.949 1.00 29.95 C
ATOM 10 O3' A A 41 -0.949 51.959 6.733 1.00 31.10 O
ATOM 11 C2' A A 41 -3.398 51.790 6.350 1.00 28.83 C
ATOM 12 O2' A A 41 -3.271 50.488 6.886 1.00 28.75 O
ATOM 13 C1' A A 41 -3.889 52.758 7.421 1.00 27.31 C
ATOM 14 N9 A A 41 -5.329 52.712 7.670 1.00 25.96 N
ATOM 15 C8 A A 41 -6.331 52.675 6.737 1.00 25.52 C
ATOM 16 N7 A A 41 -7.538 52.636 7.251 1.00 25.14 N
ATOM 17 C5 A A 41 -7.313 52.651 8.618 1.00 24.63 C
ATOM 18 C6 A A 41 -8.186 52.630 9.726 1.00 24.18 C
ATOM 19 N6 A A 41 -9.515 52.588 9.612 1.00 25.04 N
ATOM 20 N1 A A 41 -7.648 52.659 10.962 1.00 23.78 N
ATOM 21 C2 A A 41 -6.315 52.702 11.075 1.00 24.22 C
ATOM 22 N3 A A 41 -5.393 52.725 10.111 1.00 24.54 N
ATOM 23 C4 A A 41 -5.960 52.703 8.893 1.00 24.92 C
ATOM 24 P G A 42 0.556 52.176 6.219 1.00 31.65 P
ATOM 25 OP1 G A 42 1.009 53.513 6.662 1.00 32.23 O
ATOM 26 OP2 G A 42 0.593 51.824 4.779 1.00 31.49 O
ATOM 27 O5' G A 42 1.388 51.093 7.042 1.00 32.11 O
TER
ATOM 1 O3' G B 48 -15.193 48.002 0.101 1.00 26.80 O
ATOM 2 P A B 49 -15.586 49.553 0.126 1.00 27.42 P
ATOM 3 OP1 A B 49 -16.809 49.758 -0.691 1.00 26.51 O
ATOM 4 OP2 A B 49 -14.357 50.342 -0.158 1.00 27.05 O
ATOM 5 O5' A B 49 -15.940 49.750 1.677 1.00 26.82 O
ATOM 6 C5' A B 49 -16.943 48.953 2.314 1.00 25.53 C
ATOM 7 C4' A B 49 -16.775 48.977 3.824 1.00 24.53 C
ATOM 8 O4' A B 49 -15.437 48.557 4.192 1.00 23.95 O
ATOM 9 C3' A B 49 -16.887 50.343 4.477 1.00 23.91 C
ATOM 10 O3' A B 49 -18.239 50.749 4.601 1.00 23.36 O
ATOM 11 C2' A B 49 -16.204 50.085 5.816 1.00 23.98 C
ATOM 12 O2' A B 49 -17.002 49.347 6.723 1.00 24.75 O
ATOM 13 C1' A B 49 -15.018 49.239 5.361 1.00 23.04 C
ATOM 14 N9 A B 49 -13.793 50.000 5.078 1.00 22.28 N
ATOM 15 C8 A B 49 -13.290 50.355 3.852 1.00 21.75 C
ATOM 16 N7 A B 49 -12.162 51.032 3.914 1.00 21.23 N
ATOM 17 C5 A B 49 -11.903 51.136 5.273 1.00 21.64 C
ATOM 18 C6 A B 49 -10.852 51.738 6.013 1.00 22.00 C
ATOM 19 N6 A B 49 -9.828 52.378 5.443 1.00 22.19 N
ATOM 20 N1 A B 49 -10.889 51.663 7.370 1.00 22.55 N
ATOM 21 C2 A B 49 -11.918 51.017 7.949 1.00 22.69 C
ATOM 22 N3 A B 49 -12.964 50.409 7.358 1.00 22.67 N
ATOM 23 C4 A B 49 -12.896 50.504 6.007 1.00 22.22 C
ATOM 24 P A B 50 -18.623 52.228 4.124 1.00 23.42 P
ATOM 25 OP1 A B 50 -20.078 52.432 4.313 1.00 22.97 O
ATOM 26 OP2 A B 50 -18.033 52.433 2.783 1.00 23.54 O
ATOM 27 O5' A B 50 -17.822 53.146 5.170 1.00 24.38 O
TER
ATOM 2 P A A 41 -3.105 54.283 2.479 1.00 34.69 P
ATOM 3 OP1 A A 41 -1.733 53.770 2.254 1.00 34.76 O
ATOM 4 OP2 A A 41 -4.258 53.589 1.861 1.00 34.54 O
ATOM 5 O5' A A 41 -3.354 54.376 4.060 1.00 33.27 O
ATOM 6 C5' A A 41 -2.314 54.786 4.945 1.00 31.05 C
ATOM 7 C4' A A 41 -2.290 53.920 6.194 1.00 30.09 C
ATOM 8 O4' A A 41 -3.548 54.028 6.913 1.00 29.02 O
ATOM 9 C3' A A 41 -2.063 52.426 5.949 1.00 29.95 C
ATOM 10 O3' A A 41 -0.949 51.959 6.733 1.00 31.10 O
ATOM 11 C2' A A 41 -3.398 51.790 6.350 1.00 28.83 C
ATOM 12 O2' A A 41 -3.271 50.488 6.886 1.00 28.75 O
ATOM 13 C1' A A 41 -3.889 52.758 7.421 1.00 27.31 C
ATOM 14 N9 A A 41 -5.329 52.712 7.670 1.00 25.96 N
ATOM 15 C8 A A 41 -6.331 52.675 6.737 1.00 25.52 C
ATOM 16 N7 A A 41 -7.538 52.636 7.251 1.00 25.14 N
ATOM 17 C5 A A 41 -7.313 52.651 8.618 1.00 24.63 C
ATOM 18 C6 A A 41 -8.186 52.630 9.726 1.00 24.18 C
ATOM 19 N6 A A 41 -9.515 52.588 9.612 1.00 25.04 N
ATOM 20 N1 A A 41 -7.648 52.659 10.962 1.00 23.78 N
ATOM 21 C2 A A 41 -6.315 52.702 11.075 1.00 24.22 C
ATOM 22 N3 A A 41 -5.393 52.725 10.111 1.00 24.54 N
ATOM 23 C4 A A 41 -5.960 52.703 8.893 1.00 24.92 C
ATOM 24 P G A 42 0.556 52.176 6.219 1.00 31.65 P
ATOM 25 OP1 G A 42 1.009 53.513 6.662 1.00 32.23 O
ATOM 26 OP2 G A 42 0.593 51.824 4.779 1.00 31.49 O
ATOM 27 O5' G A 42 1.388 51.093 7.042 1.00 32.11 O
TER
ATOM 1 O3' G B 48 -15.193 48.002 0.101 1.00 26.80 O
ATOM 2 P A B 49 -15.586 49.553 0.126 1.00 27.42 P
ATOM 3 OP1 A B 49 -16.809 49.758 -0.691 1.00 26.51 O
ATOM 4 OP2 A B 49 -14.357 50.342 -0.158 1.00 27.05 O
ATOM 5 O5' A B 49 -15.940 49.750 1.677 1.00 26.82 O
ATOM 6 C5' A B 49 -16.943 48.953 2.314 1.00 25.53 C
ATOM 7 C4' A B 49 -16.775 48.977 3.824 1.00 24.53 C
ATOM 8 O4' A B 49 -15.437 48.557 4.192 1.00 23.95 O
ATOM 9 C3' A B 49 -16.887 50.343 4.477 1.00 23.91 C
ATOM 10 O3' A B 49 -18.239 50.749 4.601 1.00 23.36 O
ATOM 11 C2' A B 49 -16.204 50.085 5.816 1.00 23.98 C
ATOM 12 O2' A B 49 -17.002 49.347 6.723 1.00 24.75 O
ATOM 13 C1' A B 49 -15.018 49.239 5.361 1.00 23.04 C
ATOM 14 N9 A B 49 -13.793 50.000 5.078 1.00 22.28 N
ATOM 15 C8 A B 49 -13.290 50.355 3.852 1.00 21.75 C
ATOM 16 N7 A B 49 -12.162 51.032 3.914 1.00 21.23 N
ATOM 17 C5 A B 49 -11.903 51.136 5.273 1.00 21.64 C
ATOM 18 C6 A B 49 -10.852 51.738 6.013 1.00 22.00 C
ATOM 19 N6 A B 49 -9.828 52.378 5.443 1.00 22.19 N
ATOM 20 N1 A B 49 -10.889 51.663 7.370 1.00 22.55 N
ATOM 21 C2 A B 49 -11.918 51.017 7.949 1.00 22.69 C
ATOM 22 N3 A B 49 -12.964 50.409 7.358 1.00 22.67 N
ATOM 23 C4 A B 49 -12.896 50.504 6.007 1.00 22.22 C
ATOM 24 P A B 50 -18.623 52.228 4.124 1.00 23.42 P
ATOM 25 OP1 A B 50 -20.078 52.432 4.313 1.00 22.97 O
ATOM 26 OP2 A B 50 -18.033 52.433 2.783 1.00 23.54 O
ATOM 27 O5' A B 50 -17.822 53.146 5.170 1.00 24.38 O
TER
Atoms:
OP1: (-1.733,53.770,2.254)
OP2: (-4.258,53.589,1.861)
C3': (-2.063,52.426,5.949)
C1': (-3.889,52.758,7.421)
C5': (-2.314,54.786,4.945)
O4': (-3.548,54.028,6.913)
C8: (-6.331,52.675,6.737)
O2': (-3.271,50.488,6.886)
C6: (-8.186,52.630,9.726)
C5: (-7.313,52.651,8.618)
C4: (-5.960,52.703,8.893)
P: (-3.105,54.283,2.479)
C4': (-2.290,53.920,6.194)
C2': (-3.398,51.790,6.350)
C2: (-6.315,52.702,11.075)
N1: (-7.648,52.659,10.962)
N3: (-5.393,52.725,10.111)
N6: (-9.515,52.588,9.612)
N7: (-7.538,52.636,7.251)
N9: (-5.329,52.712,7.670)
O5': (-3.354,54.376,4.060)
O3': (-0.949,51.959,6.733)
OP2: (-4.258,53.589,1.861)
C3': (-2.063,52.426,5.949)
C1': (-3.889,52.758,7.421)
C5': (-2.314,54.786,4.945)
O4': (-3.548,54.028,6.913)
C8: (-6.331,52.675,6.737)
O2': (-3.271,50.488,6.886)
C6: (-8.186,52.630,9.726)
C5: (-7.313,52.651,8.618)
C4: (-5.960,52.703,8.893)
P: (-3.105,54.283,2.479)
C4': (-2.290,53.920,6.194)
C2': (-3.398,51.790,6.350)
C2: (-6.315,52.702,11.075)
N1: (-7.648,52.659,10.962)
N3: (-5.393,52.725,10.111)
N6: (-9.515,52.588,9.612)
N7: (-7.538,52.636,7.251)
N9: (-5.329,52.712,7.670)
O5': (-3.354,54.376,4.060)
O3': (-0.949,51.959,6.733)
OP1: (-16.809,49.758,-0.691)
OP2: (-14.357,50.342,-0.158)
C3': (-16.887,50.343,4.477)
C1': (-15.018,49.239,5.361)
C5': (-16.943,48.953,2.314)
O4': (-15.437,48.557,4.192)
C8: (-13.290,50.355,3.852)
O2': (-17.002,49.347,6.723)
C6: (-10.852,51.738,6.013)
C5: (-11.903,51.136,5.273)
C4: (-12.896,50.504,6.007)
P: (-15.586,49.553,0.126)
C4': (-16.775,48.977,3.824)
C2': (-16.204,50.085,5.816)
C2: (-11.918,51.017,7.949)
N1: (-10.889,51.663,7.370)
N3: (-12.964,50.409,7.358)
N6: (-9.828,52.378,5.443)
N7: (-12.162,51.032,3.914)
N9: (-13.793,50.000,5.078)
O5': (-15.940,49.750,1.677)
O3': (-18.239,50.749,4.601)
OP2: (-14.357,50.342,-0.158)
C3': (-16.887,50.343,4.477)
C1': (-15.018,49.239,5.361)
C5': (-16.943,48.953,2.314)
O4': (-15.437,48.557,4.192)
C8: (-13.290,50.355,3.852)
O2': (-17.002,49.347,6.723)
C6: (-10.852,51.738,6.013)
C5: (-11.903,51.136,5.273)
C4: (-12.896,50.504,6.007)
P: (-15.586,49.553,0.126)
C4': (-16.775,48.977,3.824)
C2': (-16.204,50.085,5.816)
C2: (-11.918,51.017,7.949)
N1: (-10.889,51.663,7.370)
N3: (-12.964,50.409,7.358)
N6: (-9.828,52.378,5.443)
N7: (-12.162,51.032,3.914)
N9: (-13.793,50.000,5.078)
O5': (-15.940,49.750,1.677)
O3': (-18.239,50.749,4.601)
Image (generated by PyMOL):