Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D0U:A38:A46
Extra
PDB:
ATOM 1 O3' C A 37 -19.134 39.806 -11.009 1.00 48.61 O
ATOM 2 P A A 38 -17.659 40.375 -11.250 1.00 49.83 P
ATOM 3 OP1 A A 38 -17.128 40.740 -9.918 1.00 46.58 O
ATOM 4 OP2 A A 38 -17.688 41.378 -12.340 1.00 45.12 O
ATOM 5 O5' A A 38 -16.879 39.093 -11.797 1.00 46.42 O
ATOM 6 C5' A A 38 -16.756 37.942 -10.984 1.00 44.85 C
ATOM 7 C4' A A 38 -15.377 37.359 -11.198 1.00 46.39 C
ATOM 8 O4' A A 38 -15.254 36.919 -12.575 1.00 45.32 O
ATOM 9 C3' A A 38 -14.248 38.358 -10.961 1.00 44.60 C
ATOM 10 O3' A A 38 -13.212 37.752 -10.222 1.00 46.92 O
ATOM 11 C2' A A 38 -13.746 38.652 -12.363 1.00 45.16 C
ATOM 12 O2' A A 38 -12.367 38.945 -12.360 1.00 49.13 O
ATOM 13 C1' A A 38 -13.980 37.305 -13.026 1.00 45.09 C
ATOM 14 N9 A A 38 -13.976 37.393 -14.478 1.00 46.36 N
ATOM 15 C8 A A 38 -14.616 38.325 -15.241 1.00 48.43 C
ATOM 16 N7 A A 38 -14.430 38.174 -16.530 1.00 48.49 N
ATOM 17 C5 A A 38 -13.606 37.067 -16.614 1.00 47.59 C
ATOM 18 C6 A A 38 -13.042 36.392 -17.710 1.00 48.25 C
ATOM 19 N6 A A 38 -13.243 36.768 -18.976 1.00 49.91 N
ATOM 20 N1 A A 38 -12.266 35.321 -17.459 1.00 47.32 N
ATOM 21 C2 A A 38 -12.073 34.963 -16.189 1.00 48.09 C
ATOM 22 N3 A A 38 -12.547 35.519 -15.076 1.00 49.69 N
ATOM 23 C4 A A 38 -13.315 36.576 -15.362 1.00 47.32 C
ATOM 24 P G A 39 -13.340 37.479 -8.653 1.00 49.20 P
ATOM 25 OP1 G A 39 -13.808 36.080 -8.484 1.00 42.47 O
ATOM 26 OP2 G A 39 -14.040 38.623 -8.021 1.00 44.77 O
ATOM 27 O5' G A 39 -11.810 37.529 -8.199 1.00 50.17 O
TER
ATOM 1 O3' G B 45 -16.032 48.431 -22.104 1.00 66.03 O
ATOM 2 P A B 46 -16.928 47.405 -22.945 1.00 68.21 P
ATOM 3 OP1 A B 46 -17.636 48.174 -23.995 1.00 67.95 O
ATOM 4 OP2 A B 46 -17.721 46.573 -22.011 1.00 63.47 O
ATOM 5 O5' A B 46 -15.813 46.511 -23.657 1.00 59.95 O
ATOM 6 C5' A B 46 -16.232 45.620 -24.657 1.00 59.67 C
ATOM 7 C4' A B 46 -15.139 44.634 -24.988 1.00 60.60 C
ATOM 8 O4' A B 46 -14.138 44.591 -23.944 1.00 60.13 O
ATOM 9 C3' A B 46 -15.678 43.222 -25.065 1.00 61.77 C
ATOM 10 O3' A B 46 -16.206 43.022 -26.357 1.00 62.44 O
ATOM 11 C2' A B 46 -14.444 42.385 -24.758 1.00 58.86 C
ATOM 12 O2' A B 46 -13.586 42.265 -25.871 1.00 58.50 O
ATOM 13 C1' A B 46 -13.793 43.240 -23.675 1.00 58.29 C
ATOM 14 N9 A B 46 -14.232 42.916 -22.317 1.00 58.74 N
ATOM 15 C8 A B 46 -14.800 43.770 -21.410 1.00 60.07 C
ATOM 16 N7 A B 46 -15.093 43.211 -20.257 1.00 58.65 N
ATOM 17 C5 A B 46 -14.690 41.896 -20.420 1.00 55.17 C
ATOM 18 C6 A B 46 -14.728 40.785 -19.560 1.00 52.92 C
ATOM 19 N6 A B 46 -15.216 40.830 -18.318 1.00 52.85 N
ATOM 20 N1 A B 46 -14.247 39.619 -20.028 1.00 52.38 N
ATOM 21 C2 A B 46 -13.761 39.576 -21.270 1.00 53.46 C
ATOM 22 N3 A B 46 -13.670 40.551 -22.170 1.00 55.54 N
ATOM 23 C4 A B 46 -14.157 41.698 -21.679 1.00 56.01 C
ATOM 24 P A B 47 -17.770 42.718 -26.431 1.00 70.02 P
ATOM 25 OP1 A B 47 -18.216 42.876 -27.836 1.00 67.60 O
ATOM 26 OP2 A B 47 -18.428 43.467 -25.328 1.00 60.68 O
ATOM 27 O5' A B 47 -17.766 41.154 -26.095 1.00 64.38 O
TER
ATOM 2 P A A 38 -17.659 40.375 -11.250 1.00 49.83 P
ATOM 3 OP1 A A 38 -17.128 40.740 -9.918 1.00 46.58 O
ATOM 4 OP2 A A 38 -17.688 41.378 -12.340 1.00 45.12 O
ATOM 5 O5' A A 38 -16.879 39.093 -11.797 1.00 46.42 O
ATOM 6 C5' A A 38 -16.756 37.942 -10.984 1.00 44.85 C
ATOM 7 C4' A A 38 -15.377 37.359 -11.198 1.00 46.39 C
ATOM 8 O4' A A 38 -15.254 36.919 -12.575 1.00 45.32 O
ATOM 9 C3' A A 38 -14.248 38.358 -10.961 1.00 44.60 C
ATOM 10 O3' A A 38 -13.212 37.752 -10.222 1.00 46.92 O
ATOM 11 C2' A A 38 -13.746 38.652 -12.363 1.00 45.16 C
ATOM 12 O2' A A 38 -12.367 38.945 -12.360 1.00 49.13 O
ATOM 13 C1' A A 38 -13.980 37.305 -13.026 1.00 45.09 C
ATOM 14 N9 A A 38 -13.976 37.393 -14.478 1.00 46.36 N
ATOM 15 C8 A A 38 -14.616 38.325 -15.241 1.00 48.43 C
ATOM 16 N7 A A 38 -14.430 38.174 -16.530 1.00 48.49 N
ATOM 17 C5 A A 38 -13.606 37.067 -16.614 1.00 47.59 C
ATOM 18 C6 A A 38 -13.042 36.392 -17.710 1.00 48.25 C
ATOM 19 N6 A A 38 -13.243 36.768 -18.976 1.00 49.91 N
ATOM 20 N1 A A 38 -12.266 35.321 -17.459 1.00 47.32 N
ATOM 21 C2 A A 38 -12.073 34.963 -16.189 1.00 48.09 C
ATOM 22 N3 A A 38 -12.547 35.519 -15.076 1.00 49.69 N
ATOM 23 C4 A A 38 -13.315 36.576 -15.362 1.00 47.32 C
ATOM 24 P G A 39 -13.340 37.479 -8.653 1.00 49.20 P
ATOM 25 OP1 G A 39 -13.808 36.080 -8.484 1.00 42.47 O
ATOM 26 OP2 G A 39 -14.040 38.623 -8.021 1.00 44.77 O
ATOM 27 O5' G A 39 -11.810 37.529 -8.199 1.00 50.17 O
TER
ATOM 1 O3' G B 45 -16.032 48.431 -22.104 1.00 66.03 O
ATOM 2 P A B 46 -16.928 47.405 -22.945 1.00 68.21 P
ATOM 3 OP1 A B 46 -17.636 48.174 -23.995 1.00 67.95 O
ATOM 4 OP2 A B 46 -17.721 46.573 -22.011 1.00 63.47 O
ATOM 5 O5' A B 46 -15.813 46.511 -23.657 1.00 59.95 O
ATOM 6 C5' A B 46 -16.232 45.620 -24.657 1.00 59.67 C
ATOM 7 C4' A B 46 -15.139 44.634 -24.988 1.00 60.60 C
ATOM 8 O4' A B 46 -14.138 44.591 -23.944 1.00 60.13 O
ATOM 9 C3' A B 46 -15.678 43.222 -25.065 1.00 61.77 C
ATOM 10 O3' A B 46 -16.206 43.022 -26.357 1.00 62.44 O
ATOM 11 C2' A B 46 -14.444 42.385 -24.758 1.00 58.86 C
ATOM 12 O2' A B 46 -13.586 42.265 -25.871 1.00 58.50 O
ATOM 13 C1' A B 46 -13.793 43.240 -23.675 1.00 58.29 C
ATOM 14 N9 A B 46 -14.232 42.916 -22.317 1.00 58.74 N
ATOM 15 C8 A B 46 -14.800 43.770 -21.410 1.00 60.07 C
ATOM 16 N7 A B 46 -15.093 43.211 -20.257 1.00 58.65 N
ATOM 17 C5 A B 46 -14.690 41.896 -20.420 1.00 55.17 C
ATOM 18 C6 A B 46 -14.728 40.785 -19.560 1.00 52.92 C
ATOM 19 N6 A B 46 -15.216 40.830 -18.318 1.00 52.85 N
ATOM 20 N1 A B 46 -14.247 39.619 -20.028 1.00 52.38 N
ATOM 21 C2 A B 46 -13.761 39.576 -21.270 1.00 53.46 C
ATOM 22 N3 A B 46 -13.670 40.551 -22.170 1.00 55.54 N
ATOM 23 C4 A B 46 -14.157 41.698 -21.679 1.00 56.01 C
ATOM 24 P A B 47 -17.770 42.718 -26.431 1.00 70.02 P
ATOM 25 OP1 A B 47 -18.216 42.876 -27.836 1.00 67.60 O
ATOM 26 OP2 A B 47 -18.428 43.467 -25.328 1.00 60.68 O
ATOM 27 O5' A B 47 -17.766 41.154 -26.095 1.00 64.38 O
TER
Atoms:
OP1: (-17.128,40.740,-9.918)
OP2: (-17.688,41.378,-12.340)
C3': (-14.248,38.358,-10.961)
C1': (-13.980,37.305,-13.026)
C5': (-16.756,37.942,-10.984)
O4': (-15.254,36.919,-12.575)
C8: (-14.616,38.325,-15.241)
O2': (-12.367,38.945,-12.360)
C6: (-13.042,36.392,-17.710)
C5: (-13.606,37.067,-16.614)
C4: (-13.315,36.576,-15.362)
P: (-17.659,40.375,-11.250)
C4': (-15.377,37.359,-11.198)
C2': (-13.746,38.652,-12.363)
C2: (-12.073,34.963,-16.189)
N1: (-12.266,35.321,-17.459)
N3: (-12.547,35.519,-15.076)
N6: (-13.243,36.768,-18.976)
N7: (-14.430,38.174,-16.530)
N9: (-13.976,37.393,-14.478)
O5': (-16.879,39.093,-11.797)
O3': (-13.212,37.752,-10.222)
OP2: (-17.688,41.378,-12.340)
C3': (-14.248,38.358,-10.961)
C1': (-13.980,37.305,-13.026)
C5': (-16.756,37.942,-10.984)
O4': (-15.254,36.919,-12.575)
C8: (-14.616,38.325,-15.241)
O2': (-12.367,38.945,-12.360)
C6: (-13.042,36.392,-17.710)
C5: (-13.606,37.067,-16.614)
C4: (-13.315,36.576,-15.362)
P: (-17.659,40.375,-11.250)
C4': (-15.377,37.359,-11.198)
C2': (-13.746,38.652,-12.363)
C2: (-12.073,34.963,-16.189)
N1: (-12.266,35.321,-17.459)
N3: (-12.547,35.519,-15.076)
N6: (-13.243,36.768,-18.976)
N7: (-14.430,38.174,-16.530)
N9: (-13.976,37.393,-14.478)
O5': (-16.879,39.093,-11.797)
O3': (-13.212,37.752,-10.222)
OP1: (-17.636,48.174,-23.995)
OP2: (-17.721,46.573,-22.011)
C3': (-15.678,43.222,-25.065)
C1': (-13.793,43.240,-23.675)
C5': (-16.232,45.620,-24.657)
O4': (-14.138,44.591,-23.944)
C8: (-14.800,43.770,-21.410)
O2': (-13.586,42.265,-25.871)
C6: (-14.728,40.785,-19.560)
C5: (-14.690,41.896,-20.420)
C4: (-14.157,41.698,-21.679)
P: (-16.928,47.405,-22.945)
C4': (-15.139,44.634,-24.988)
C2': (-14.444,42.385,-24.758)
C2: (-13.761,39.576,-21.270)
N1: (-14.247,39.619,-20.028)
N3: (-13.670,40.551,-22.170)
N6: (-15.216,40.830,-18.318)
N7: (-15.093,43.211,-20.257)
N9: (-14.232,42.916,-22.317)
O5': (-15.813,46.511,-23.657)
O3': (-16.206,43.022,-26.357)
OP2: (-17.721,46.573,-22.011)
C3': (-15.678,43.222,-25.065)
C1': (-13.793,43.240,-23.675)
C5': (-16.232,45.620,-24.657)
O4': (-14.138,44.591,-23.944)
C8: (-14.800,43.770,-21.410)
O2': (-13.586,42.265,-25.871)
C6: (-14.728,40.785,-19.560)
C5: (-14.690,41.896,-20.420)
C4: (-14.157,41.698,-21.679)
P: (-16.928,47.405,-22.945)
C4': (-15.139,44.634,-24.988)
C2': (-14.444,42.385,-24.758)
C2: (-13.761,39.576,-21.270)
N1: (-14.247,39.619,-20.028)
N3: (-13.670,40.551,-22.170)
N6: (-15.216,40.830,-18.318)
N7: (-15.093,43.211,-20.257)
N9: (-14.232,42.916,-22.317)
O5': (-15.813,46.511,-23.657)
O3': (-16.206,43.022,-26.357)
Image (generated by PyMOL):