ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3LA5:A22:A51

Extra

PDB:
ATOM 1 O3' U A 21 -16.910 29.212 17.589 1.00 17.37 O
ATOM 2 P A A 22 -16.964 30.214 18.834 1.00 18.08 P
ATOM 3 OP1 A A 22 -16.883 29.415 20.080 1.00 19.80 O
ATOM 4 OP2 A A 22 -18.104 31.153 18.653 1.00 17.89 O
ATOM 5 O5' A A 22 -15.633 31.051 18.590 1.00 21.51 O
ATOM 6 C5' A A 22 -14.343 30.469 18.724 1.00 18.77 C
ATOM 7 C4' A A 22 -13.307 31.499 18.332 1.00 16.73 C
ATOM 8 O4' A A 22 -13.280 31.650 16.884 1.00 16.73 O
ATOM 9 C3' A A 22 -13.588 32.892 18.890 1.00 15.03 C
ATOM 10 O3' A A 22 -12.370 33.531 19.259 1.00 18.13 O
ATOM 11 C2' A A 22 -14.259 33.610 17.718 1.00 17.84 C
ATOM 12 O2' A A 22 -14.034 35.008 17.755 1.00 19.26 O
ATOM 13 C1' A A 22 -13.568 32.984 16.512 1.00 16.11 C
ATOM 14 N9 A A 22 -14.402 32.931 15.314 1.00 15.42 N
ATOM 15 C8 A A 22 -15.268 31.938 14.943 1.00 16.32 C
ATOM 16 N7 A A 22 -15.878 32.173 13.803 1.00 15.97 N
ATOM 17 C5 A A 22 -15.373 33.402 13.399 1.00 17.24 C
ATOM 18 C6 A A 22 -15.614 34.212 12.267 1.00 17.13 C
ATOM 19 N6 A A 22 -16.468 33.886 11.289 1.00 15.82 N
ATOM 20 N1 A A 22 -14.941 35.378 12.176 1.00 18.39 N
ATOM 21 C2 A A 22 -14.082 35.714 13.148 1.00 18.26 C
ATOM 22 N3 A A 22 -13.771 35.037 14.256 1.00 19.80 N
ATOM 23 C4 A A 22 -14.462 33.882 14.322 1.00 16.78 C
ATOM 24 P U A 23 -11.927 33.608 20.803 1.00 23.05 P
ATOM 25 OP1 U A 23 -13.082 34.067 21.608 1.00 21.81 O
ATOM 26 OP2 U A 23 -10.626 34.321 20.840 1.00 23.97 O
ATOM 27 O5' U A 23 -11.715 32.071 21.203 1.00 20.09 O
TER

ATOM 1 O3' U B 50 -23.726 29.671 12.669 1.00 25.77 O
ATOM 2 P A B 51 -24.894 28.787 12.014 1.00 32.12 P
ATOM 3 OP1 A B 51 -26.177 29.514 12.143 1.00 37.59 O
ATOM 4 OP2 A B 51 -24.729 27.417 12.560 1.00 34.78 O
ATOM 5 O5' A B 51 -24.530 28.750 10.470 1.00 29.91 O
ATOM 6 C5' A B 51 -23.750 27.695 10.044 1.00 32.52 C
ATOM 7 C4' A B 51 -23.432 27.813 8.574 1.00 30.52 C
ATOM 8 O4' A B 51 -22.603 28.978 8.307 1.00 27.67 O
ATOM 9 C3' A B 51 -22.634 26.592 8.170 1.00 28.72 C
ATOM 10 O3' A B 51 -23.481 25.729 7.408 1.00 31.02 O
ATOM 11 C2' A B 51 -21.429 27.158 7.421 1.00 26.58 C
ATOM 12 O2' A B 51 -21.694 27.286 6.038 1.00 30.04 O
ATOM 13 C1' A B 51 -21.275 28.547 8.049 1.00 24.53 C
ATOM 14 N9 A B 51 -20.517 28.675 9.307 1.00 22.01 N
ATOM 15 C8 A B 51 -20.519 27.852 10.402 1.00 20.97 C
ATOM 16 N7 A B 51 -19.740 28.262 11.381 1.00 19.52 N
ATOM 17 C5 A B 51 -19.201 29.449 10.910 1.00 19.79 C
ATOM 18 C6 A B 51 -18.295 30.383 11.465 1.00 16.93 C
ATOM 19 N6 A B 51 -17.749 30.271 12.685 1.00 17.41 N
ATOM 20 N1 A B 51 -17.967 31.457 10.719 1.00 19.69 N
ATOM 21 C2 A B 51 -18.506 31.582 9.500 1.00 20.59 C
ATOM 22 N3 A B 51 -19.358 30.771 8.872 1.00 20.80 N
ATOM 23 C4 A B 51 -19.674 29.716 9.637 1.00 19.17 C
ATOM 24 P A B 52 -23.408 24.163 7.716 1.00 30.32 P
ATOM 25 OP1 A B 52 -24.542 23.501 7.031 1.00 35.25 O
ATOM 26 OP2 A B 52 -23.188 23.964 9.166 1.00 30.39 O
ATOM 27 O5' A B 52 -22.056 23.770 6.956 1.00 25.20 O
TER

Atoms:
OP1: (-16.883,29.415,20.080)
OP2: (-18.104,31.153,18.653)
C3': (-13.588,32.892,18.890)
C1': (-13.568,32.984,16.512)
C5': (-14.343,30.469,18.724)
O4': (-13.280,31.650,16.884)
C8: (-15.268,31.938,14.943)
O2': (-14.034,35.008,17.755)
C6: (-15.614,34.212,12.267)
C5: (-15.373,33.402,13.399)
C4: (-14.462,33.882,14.322)
P: (-16.964,30.214,18.834)
C4': (-13.307,31.499,18.332)
C2': (-14.259,33.610,17.718)
C2: (-14.082,35.714,13.148)
N1: (-14.941,35.378,12.176)
N3: (-13.771,35.037,14.256)
N6: (-16.468,33.886,11.289)
N7: (-15.878,32.173,13.803)
N9: (-14.402,32.931,15.314)
O5': (-15.633,31.051,18.590)
O3': (-12.370,33.531,19.259)
OP1: (-26.177,29.514,12.143)
OP2: (-24.729,27.417,12.560)
C3': (-22.634,26.592,8.170)
C1': (-21.275,28.547,8.049)
C5': (-23.750,27.695,10.044)
O4': (-22.603,28.978,8.307)
C8: (-20.519,27.852,10.402)
O2': (-21.694,27.286,6.038)
C6: (-18.295,30.383,11.465)
C5: (-19.201,29.449,10.910)
C4: (-19.674,29.716,9.637)
P: (-24.894,28.787,12.014)
C4': (-23.432,27.813,8.574)
C2': (-21.429,27.158,7.421)
C2: (-18.506,31.582,9.500)
N1: (-17.967,31.457,10.719)
N3: (-19.358,30.771,8.872)
N6: (-17.749,30.271,12.685)
N7: (-19.740,28.262,11.381)
N9: (-20.517,28.675,9.307)
O5': (-24.530,28.750,10.470)
O3': (-23.481,25.729,7.408)
Image (generated by PyMOL):
PyMOL image
show in jmol