ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1H:A2377:A2406

Extra

PDB:
ATOM 1 O3' A A2376 -113.366 -48.554 53.095 1.00 47.59 O
ATOM 2 P A A2377 -112.930 -47.734 54.388 1.00 54.91 P
ATOM 3 OP1 A A2377 -113.558 -48.377 55.573 1.00 55.30 O
ATOM 4 OP2 A A2377 -113.171 -46.296 54.086 1.00 49.32 O
ATOM 5 O5' A A2377 -111.341 -47.991 54.415 1.00 74.73 O
ATOM 6 C5' A A2377 -110.766 -49.064 55.168 1.00 74.99 C
ATOM 7 C4' A A2377 -109.265 -49.212 54.940 1.00 63.17 C
ATOM 8 O4' A A2377 -108.986 -49.141 53.518 1.00 65.14 O
ATOM 9 C3' A A2377 -108.375 -48.144 55.551 1.00 46.54 C
ATOM 10 O3' A A2377 -108.093 -48.468 56.891 1.00 40.76 O
ATOM 11 C2' A A2377 -107.129 -48.251 54.686 1.00 58.44 C
ATOM 12 O2' A A2377 -106.289 -49.319 55.062 1.00 61.88 O
ATOM 13 C1' A A2377 -107.713 -48.562 53.316 1.00 63.19 C
ATOM 14 N9 A A2377 -107.852 -47.364 52.506 1.00 60.12 N
ATOM 15 C8 A A2377 -109.001 -46.791 52.058 1.00 63.29 C
ATOM 16 N7 A A2377 -108.790 -45.704 51.354 1.00 71.55 N
ATOM 17 C5 A A2377 -107.414 -45.550 51.337 1.00 65.52 C
ATOM 18 C6 A A2377 -106.553 -44.587 50.759 1.00 62.32 C
ATOM 19 N6 A A2377 -106.947 -43.533 50.041 1.00 69.55 N
ATOM 20 N1 A A2377 -105.235 -44.745 50.947 1.00 59.95 N
ATOM 21 C2 A A2377 -104.817 -45.793 51.663 1.00 75.70 C
ATOM 22 N3 A A2377 -105.522 -46.756 52.256 1.00 77.50 N
ATOM 23 C4 A A2377 -106.828 -46.573 52.049 1.00 66.44 C
ATOM 24 P C A2378 -107.843 -47.271 57.931 1.00 49.53 P
ATOM 25 OP1 C A2378 -108.046 -47.720 59.327 1.00 51.39 O
ATOM 26 OP2 C A2378 -108.613 -46.129 57.417 1.00 62.85 O
ATOM 27 O5' C A2378 -106.313 -46.849 57.730 1.00 55.19 O
TER

ATOM 1 O3' G B2405 -111.614 -32.157 50.660 1.00 74.58 O
ATOM 2 P A B2406 -112.442 -32.581 49.352 1.00 75.81 P
ATOM 3 OP1 A B2406 -112.140 -31.619 48.271 1.00 67.12 O
ATOM 4 OP2 A B2406 -113.846 -32.804 49.763 1.00 98.66 O
ATOM 5 O5' A B2406 -111.853 -34.011 48.954 1.00 78.85 O
ATOM 6 C5' A B2406 -112.604 -34.837 48.058 1.00 78.75 C
ATOM 7 C4' A B2406 -111.663 -35.506 47.081 1.00 76.52 C
ATOM 8 O4' A B2406 -110.691 -36.235 47.861 1.00 70.49 O
ATOM 9 C3' A B2406 -112.241 -36.558 46.142 1.00 76.20 C
ATOM 10 O3' A B2406 -112.924 -36.030 44.977 1.00 66.67 O
ATOM 11 C2' A B2406 -110.982 -37.351 45.794 1.00 76.11 C
ATOM 12 O2' A B2406 -110.133 -36.690 44.874 1.00 77.85 O
ATOM 13 C1' A B2406 -110.295 -37.396 47.157 1.00 77.46 C
ATOM 14 N9 A B2406 -110.651 -38.527 48.003 1.00 73.62 N
ATOM 15 C8 A B2406 -111.905 -38.894 48.385 1.00 72.43 C
ATOM 16 N7 A B2406 -111.934 -39.953 49.156 1.00 71.20 N
ATOM 17 C5 A B2406 -110.605 -40.296 49.300 1.00 67.77 C
ATOM 18 C6 A B2406 -109.975 -41.331 50.006 1.00 68.69 C
ATOM 19 N6 A B2406 -110.652 -42.232 50.717 1.00 75.37 N
ATOM 20 N1 A B2406 -108.636 -41.404 49.947 1.00 66.51 N
ATOM 21 C2 A B2406 -107.984 -40.497 49.220 1.00 71.02 C
ATOM 22 N3 A B2406 -108.462 -39.477 48.513 1.00 69.75 N
ATOM 23 C4 A B2406 -109.797 -39.429 48.597 1.00 71.00 C
ATOM 24 P U B2407 -112.585 -34.656 44.218 1.00 72.29 P
ATOM 25 OP1 U B2407 -111.537 -33.925 44.952 1.00 75.44 O
ATOM 26 OP2 U B2407 -113.866 -33.981 43.927 1.00 82.19 O
ATOM 27 O5' U B2407 -111.975 -35.142 42.828 1.00 58.55 O
TER

Atoms:
OP1: (-113.558,-48.377,55.573)
OP2: (-113.171,-46.296,54.086)
C3': (-108.375,-48.144,55.551)
C1': (-107.713,-48.562,53.316)
C5': (-110.766,-49.064,55.168)
O4': (-108.986,-49.141,53.518)
C8: (-109.001,-46.791,52.058)
O2': (-106.289,-49.319,55.062)
C6: (-106.553,-44.587,50.759)
C5: (-107.414,-45.550,51.337)
C4: (-106.828,-46.573,52.049)
P: (-112.930,-47.734,54.388)
C4': (-109.265,-49.212,54.940)
C2': (-107.129,-48.251,54.686)
C2: (-104.817,-45.793,51.663)
N1: (-105.235,-44.745,50.947)
N3: (-105.522,-46.756,52.256)
N6: (-106.947,-43.533,50.041)
N7: (-108.790,-45.704,51.354)
N9: (-107.852,-47.364,52.506)
O5': (-111.341,-47.991,54.415)
O3': (-108.093,-48.468,56.891)
OP1: (-112.140,-31.619,48.271)
OP2: (-113.846,-32.804,49.763)
C3': (-112.241,-36.558,46.142)
C1': (-110.295,-37.396,47.157)
C5': (-112.604,-34.837,48.058)
O4': (-110.691,-36.235,47.861)
C8: (-111.905,-38.894,48.385)
O2': (-110.133,-36.690,44.874)
C6: (-109.975,-41.331,50.006)
C5: (-110.605,-40.296,49.300)
C4: (-109.797,-39.429,48.597)
P: (-112.442,-32.581,49.352)
C4': (-111.663,-35.506,47.081)
C2': (-110.982,-37.351,45.794)
C2: (-107.984,-40.497,49.220)
N1: (-108.636,-41.404,49.947)
N3: (-108.462,-39.477,48.513)
N6: (-110.652,-42.232,50.717)
N7: (-111.934,-39.953,49.156)
N9: (-110.651,-38.527,48.003)
O5': (-111.853,-34.011,48.954)
O3': (-112.924,-36.030,44.977)
Image (generated by PyMOL):
PyMOL image
show in jmol