Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02623:02627
Extra
PDB:
ATOM 1 O3' A A2622 35.856 98.719 164.336 1.00 59.16 O
ATOM 2 P A A2623 36.457 97.233 164.304 1.00 59.70 P
ATOM 3 OP1 A A2623 35.507 96.343 165.017 1.00 61.14 O
ATOM 4 OP2 A A2623 37.867 97.291 164.738 1.00 58.61 O
ATOM 5 O5' A A2623 36.398 96.828 162.766 1.00 59.96 O
ATOM 6 C5' A A2623 35.132 96.702 162.085 1.00 59.47 C
ATOM 7 C4' A A2623 35.348 96.595 160.592 1.00 60.45 C
ATOM 8 O4' A A2623 36.041 97.784 160.132 1.00 60.46 O
ATOM 9 C3' A A2623 36.222 95.444 160.112 1.00 59.83 C
ATOM 10 O3' A A2623 35.472 94.237 159.979 1.00 62.64 O
ATOM 11 C2' A A2623 36.721 95.965 158.773 1.00 58.85 C
ATOM 12 O2' A A2623 35.746 95.877 157.755 1.00 58.11 O
ATOM 13 C1' A A2623 36.946 97.441 159.099 1.00 58.72 C
ATOM 14 N9 A A2623 38.301 97.714 159.574 1.00 57.75 N
ATOM 15 C8 A A2623 38.763 97.774 160.867 1.00 56.03 C
ATOM 16 N7 A A2623 40.042 98.028 160.960 1.00 55.86 N
ATOM 17 C5 A A2623 40.453 98.146 159.639 1.00 57.94 C
ATOM 18 C6 A A2623 41.705 98.408 159.054 1.00 58.29 C
ATOM 19 N6 A A2623 42.827 98.599 159.750 1.00 58.50 N
ATOM 20 N1 A A2623 41.765 98.465 157.708 1.00 58.79 N
ATOM 21 C2 A A2623 40.644 98.262 157.005 1.00 58.24 C
ATOM 22 N3 A A2623 39.417 98.002 157.436 1.00 57.39 N
ATOM 23 C4 A A2623 39.389 97.958 158.778 1.00 57.67 C
ATOM 24 P C A2624 36.165 92.820 160.303 1.00 64.39 P
ATOM 25 OP1 C A2624 37.132 92.515 159.224 1.00 64.94 O
ATOM 26 OP2 C A2624 35.071 91.852 160.597 1.00 63.08 O
ATOM 27 O5' C A2624 37.001 93.098 161.631 1.00 63.62 O
TER
ATOM 1 O3' C B2626 44.703 99.125 171.360 1.00 63.55 O
ATOM 2 P A B2627 44.677 100.643 170.837 1.00 65.95 P
ATOM 3 OP1 A B2627 45.191 101.489 171.943 1.00 66.03 O
ATOM 4 OP2 A B2627 43.331 100.924 170.274 1.00 67.17 O
ATOM 5 O5' A B2627 45.730 100.658 169.640 1.00 63.76 O
ATOM 6 C5' A B2627 47.106 100.306 169.865 1.00 61.40 C
ATOM 7 C4' A B2627 47.755 99.887 168.571 1.00 59.77 C
ATOM 8 O4' A B2627 47.037 98.748 168.032 1.00 60.01 O
ATOM 9 C3' A B2627 47.702 100.907 167.450 1.00 58.21 C
ATOM 10 O3' A B2627 48.722 101.882 167.553 1.00 56.93 O
ATOM 11 C2' A B2627 47.854 100.034 166.218 1.00 58.57 C
ATOM 12 O2' A B2627 49.185 99.612 166.013 1.00 59.17 O
ATOM 13 C1' A B2627 47.001 98.833 166.616 1.00 59.32 C
ATOM 14 N9 A B2627 45.609 99.004 166.207 1.00 60.13 N
ATOM 15 C8 A B2627 44.525 99.358 166.975 1.00 60.32 C
ATOM 16 N7 A B2627 43.407 99.445 166.300 1.00 60.68 N
ATOM 17 C5 A B2627 43.777 99.121 165.002 1.00 60.26 C
ATOM 18 C6 A B2627 43.050 99.027 163.808 1.00 59.95 C
ATOM 19 N6 A B2627 41.740 99.249 163.717 1.00 60.31 N
ATOM 20 N1 A B2627 43.723 98.687 162.692 1.00 60.37 N
ATOM 21 C2 A B2627 45.035 98.453 162.780 1.00 60.35 C
ATOM 22 N3 A B2627 45.828 98.502 163.840 1.00 60.37 N
ATOM 23 C4 A B2627 45.129 98.846 164.932 1.00 60.36 C
ATOM 24 P U B2628 48.363 103.408 167.254 1.00 58.04 P
ATOM 25 OP1 U B2628 49.532 104.285 167.522 1.00 54.91 O
ATOM 26 OP2 U B2628 47.084 103.642 167.977 1.00 58.26 O
ATOM 27 O5' U B2628 48.045 103.413 165.691 1.00 56.48 O
TER
ATOM 2 P A A2623 36.457 97.233 164.304 1.00 59.70 P
ATOM 3 OP1 A A2623 35.507 96.343 165.017 1.00 61.14 O
ATOM 4 OP2 A A2623 37.867 97.291 164.738 1.00 58.61 O
ATOM 5 O5' A A2623 36.398 96.828 162.766 1.00 59.96 O
ATOM 6 C5' A A2623 35.132 96.702 162.085 1.00 59.47 C
ATOM 7 C4' A A2623 35.348 96.595 160.592 1.00 60.45 C
ATOM 8 O4' A A2623 36.041 97.784 160.132 1.00 60.46 O
ATOM 9 C3' A A2623 36.222 95.444 160.112 1.00 59.83 C
ATOM 10 O3' A A2623 35.472 94.237 159.979 1.00 62.64 O
ATOM 11 C2' A A2623 36.721 95.965 158.773 1.00 58.85 C
ATOM 12 O2' A A2623 35.746 95.877 157.755 1.00 58.11 O
ATOM 13 C1' A A2623 36.946 97.441 159.099 1.00 58.72 C
ATOM 14 N9 A A2623 38.301 97.714 159.574 1.00 57.75 N
ATOM 15 C8 A A2623 38.763 97.774 160.867 1.00 56.03 C
ATOM 16 N7 A A2623 40.042 98.028 160.960 1.00 55.86 N
ATOM 17 C5 A A2623 40.453 98.146 159.639 1.00 57.94 C
ATOM 18 C6 A A2623 41.705 98.408 159.054 1.00 58.29 C
ATOM 19 N6 A A2623 42.827 98.599 159.750 1.00 58.50 N
ATOM 20 N1 A A2623 41.765 98.465 157.708 1.00 58.79 N
ATOM 21 C2 A A2623 40.644 98.262 157.005 1.00 58.24 C
ATOM 22 N3 A A2623 39.417 98.002 157.436 1.00 57.39 N
ATOM 23 C4 A A2623 39.389 97.958 158.778 1.00 57.67 C
ATOM 24 P C A2624 36.165 92.820 160.303 1.00 64.39 P
ATOM 25 OP1 C A2624 37.132 92.515 159.224 1.00 64.94 O
ATOM 26 OP2 C A2624 35.071 91.852 160.597 1.00 63.08 O
ATOM 27 O5' C A2624 37.001 93.098 161.631 1.00 63.62 O
TER
ATOM 1 O3' C B2626 44.703 99.125 171.360 1.00 63.55 O
ATOM 2 P A B2627 44.677 100.643 170.837 1.00 65.95 P
ATOM 3 OP1 A B2627 45.191 101.489 171.943 1.00 66.03 O
ATOM 4 OP2 A B2627 43.331 100.924 170.274 1.00 67.17 O
ATOM 5 O5' A B2627 45.730 100.658 169.640 1.00 63.76 O
ATOM 6 C5' A B2627 47.106 100.306 169.865 1.00 61.40 C
ATOM 7 C4' A B2627 47.755 99.887 168.571 1.00 59.77 C
ATOM 8 O4' A B2627 47.037 98.748 168.032 1.00 60.01 O
ATOM 9 C3' A B2627 47.702 100.907 167.450 1.00 58.21 C
ATOM 10 O3' A B2627 48.722 101.882 167.553 1.00 56.93 O
ATOM 11 C2' A B2627 47.854 100.034 166.218 1.00 58.57 C
ATOM 12 O2' A B2627 49.185 99.612 166.013 1.00 59.17 O
ATOM 13 C1' A B2627 47.001 98.833 166.616 1.00 59.32 C
ATOM 14 N9 A B2627 45.609 99.004 166.207 1.00 60.13 N
ATOM 15 C8 A B2627 44.525 99.358 166.975 1.00 60.32 C
ATOM 16 N7 A B2627 43.407 99.445 166.300 1.00 60.68 N
ATOM 17 C5 A B2627 43.777 99.121 165.002 1.00 60.26 C
ATOM 18 C6 A B2627 43.050 99.027 163.808 1.00 59.95 C
ATOM 19 N6 A B2627 41.740 99.249 163.717 1.00 60.31 N
ATOM 20 N1 A B2627 43.723 98.687 162.692 1.00 60.37 N
ATOM 21 C2 A B2627 45.035 98.453 162.780 1.00 60.35 C
ATOM 22 N3 A B2627 45.828 98.502 163.840 1.00 60.37 N
ATOM 23 C4 A B2627 45.129 98.846 164.932 1.00 60.36 C
ATOM 24 P U B2628 48.363 103.408 167.254 1.00 58.04 P
ATOM 25 OP1 U B2628 49.532 104.285 167.522 1.00 54.91 O
ATOM 26 OP2 U B2628 47.084 103.642 167.977 1.00 58.26 O
ATOM 27 O5' U B2628 48.045 103.413 165.691 1.00 56.48 O
TER
Atoms:
OP1: (35.507,96.343,165.017)
OP2: (37.867,97.291,164.738)
C3': (36.222,95.444,160.112)
C1': (36.946,97.441,159.099)
C5': (35.132,96.702,162.085)
O4': (36.041,97.784,160.132)
C8: (38.763,97.774,160.867)
O2': (35.746,95.877,157.755)
C6: (41.705,98.408,159.054)
C5: (40.453,98.146,159.639)
C4: (39.389,97.958,158.778)
P: (36.457,97.233,164.304)
C4': (35.348,96.595,160.592)
C2': (36.721,95.965,158.773)
C2: (40.644,98.262,157.005)
N1: (41.765,98.465,157.708)
N3: (39.417,98.002,157.436)
N6: (42.827,98.599,159.750)
N7: (40.042,98.028,160.960)
N9: (38.301,97.714,159.574)
O5': (36.398,96.828,162.766)
O3': (35.472,94.237,159.979)
OP2: (37.867,97.291,164.738)
C3': (36.222,95.444,160.112)
C1': (36.946,97.441,159.099)
C5': (35.132,96.702,162.085)
O4': (36.041,97.784,160.132)
C8: (38.763,97.774,160.867)
O2': (35.746,95.877,157.755)
C6: (41.705,98.408,159.054)
C5: (40.453,98.146,159.639)
C4: (39.389,97.958,158.778)
P: (36.457,97.233,164.304)
C4': (35.348,96.595,160.592)
C2': (36.721,95.965,158.773)
C2: (40.644,98.262,157.005)
N1: (41.765,98.465,157.708)
N3: (39.417,98.002,157.436)
N6: (42.827,98.599,159.750)
N7: (40.042,98.028,160.960)
N9: (38.301,97.714,159.574)
O5': (36.398,96.828,162.766)
O3': (35.472,94.237,159.979)
OP1: (45.191,101.489,171.943)
OP2: (43.331,100.924,170.274)
C3': (47.702,100.907,167.450)
C1': (47.001,98.833,166.616)
C5': (47.106,100.306,169.865)
O4': (47.037,98.748,168.032)
C8: (44.525,99.358,166.975)
O2': (49.185,99.612,166.013)
C6: (43.050,99.027,163.808)
C5: (43.777,99.121,165.002)
C4: (45.129,98.846,164.932)
P: (44.677,100.643,170.837)
C4': (47.755,99.887,168.571)
C2': (47.854,100.034,166.218)
C2: (45.035,98.453,162.780)
N1: (43.723,98.687,162.692)
N3: (45.828,98.502,163.840)
N6: (41.740,99.249,163.717)
N7: (43.407,99.445,166.300)
N9: (45.609,99.004,166.207)
O5': (45.730,100.658,169.640)
O3': (48.722,101.882,167.553)
OP2: (43.331,100.924,170.274)
C3': (47.702,100.907,167.450)
C1': (47.001,98.833,166.616)
C5': (47.106,100.306,169.865)
O4': (47.037,98.748,168.032)
C8: (44.525,99.358,166.975)
O2': (49.185,99.612,166.013)
C6: (43.050,99.027,163.808)
C5: (43.777,99.121,165.002)
C4: (45.129,98.846,164.932)
P: (44.677,100.643,170.837)
C4': (47.755,99.887,168.571)
C2': (47.854,100.034,166.218)
C2: (45.035,98.453,162.780)
N1: (43.723,98.687,162.692)
N3: (45.828,98.502,163.840)
N6: (41.740,99.249,163.717)
N7: (43.407,99.445,166.300)
N9: (45.609,99.004,166.207)
O5': (45.730,100.658,169.640)
O3': (48.722,101.882,167.553)
Image (generated by PyMOL):