Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIX:A41:A49
Extra
PDB:
ATOM 1 O3' C A 40 -4.072 55.561 1.707 1.00 37.59 O
ATOM 2 P A A 41 -3.961 54.194 2.528 1.00 36.22 P
ATOM 3 OP1 A A 41 -2.655 53.577 2.193 1.00 36.22 O
ATOM 4 OP2 A A 41 -5.215 53.428 2.327 1.00 36.05 O
ATOM 5 O5' A A 41 -3.930 54.723 4.042 1.00 34.85 O
ATOM 6 C5' A A 41 -2.728 54.709 4.808 1.00 32.07 C
ATOM 7 C4' A A 41 -2.907 53.869 6.056 1.00 29.79 C
ATOM 8 O4' A A 41 -4.234 54.065 6.602 1.00 28.78 O
ATOM 9 C3' A A 41 -2.764 52.364 5.839 1.00 29.49 C
ATOM 10 O3' A A 41 -1.633 51.849 6.562 1.00 30.77 O
ATOM 11 C2' A A 41 -4.083 51.790 6.366 1.00 28.43 C
ATOM 12 O2' A A 41 -3.930 50.592 7.101 1.00 28.43 O
ATOM 13 C1' A A 41 -4.544 52.889 7.309 1.00 27.14 C
ATOM 14 N9 A A 41 -5.965 52.817 7.655 1.00 25.74 N
ATOM 15 C8 A A 41 -7.017 52.762 6.789 1.00 25.02 C
ATOM 16 N7 A A 41 -8.185 52.693 7.378 1.00 24.79 N
ATOM 17 C5 A A 41 -7.884 52.701 8.726 1.00 24.38 C
ATOM 18 C6 A A 41 -8.696 52.646 9.877 1.00 23.93 C
ATOM 19 N6 A A 41 -10.027 52.571 9.819 1.00 24.87 N
ATOM 20 N1 A A 41 -8.091 52.674 11.084 1.00 23.50 N
ATOM 21 C2 A A 41 -6.754 52.752 11.127 1.00 23.95 C
ATOM 22 N3 A A 41 -5.885 52.805 10.112 1.00 24.38 N
ATOM 23 C4 A A 41 -6.518 52.778 8.921 1.00 24.82 C
ATOM 24 P G A 42 -0.129 52.227 6.154 1.00 30.70 P
ATOM 25 OP1 G A 42 0.099 53.637 6.552 1.00 31.25 O
ATOM 26 OP2 G A 42 0.043 51.820 4.741 1.00 30.94 O
ATOM 27 O5' G A 42 0.785 51.281 7.061 1.00 30.11 O
TER
ATOM 1 O3' G B 48 -16.087 48.098 0.310 1.00 32.27 O
ATOM 2 P A B 49 -16.431 49.660 0.452 1.00 31.93 P
ATOM 3 OP1 A B 49 -17.735 49.919 -0.202 1.00 32.05 O
ATOM 4 OP2 A B 49 -15.261 50.469 0.041 1.00 31.74 O
ATOM 5 O5' A B 49 -16.603 49.770 2.037 1.00 31.25 O
ATOM 6 C5' A B 49 -17.614 48.995 2.671 1.00 30.98 C
ATOM 7 C4' A B 49 -17.451 49.019 4.174 1.00 30.79 C
ATOM 8 O4' A B 49 -16.125 48.566 4.530 1.00 30.76 O
ATOM 9 C3' A B 49 -17.523 50.398 4.799 1.00 30.43 C
ATOM 10 O3' A B 49 -18.866 50.819 4.952 1.00 29.56 O
ATOM 11 C2' A B 49 -16.805 50.176 6.123 1.00 30.55 C
ATOM 12 O2' A B 49 -17.578 49.456 7.061 1.00 30.98 O
ATOM 13 C1' A B 49 -15.656 49.296 5.654 1.00 30.55 C
ATOM 14 N9 A B 49 -14.414 49.996 5.305 1.00 30.50 N
ATOM 15 C8 A B 49 -13.886 50.180 4.054 1.00 30.46 C
ATOM 16 N7 A B 49 -12.746 50.827 4.040 1.00 30.15 N
ATOM 17 C5 A B 49 -12.505 51.087 5.378 1.00 30.32 C
ATOM 18 C6 A B 49 -11.450 51.748 6.043 1.00 30.37 C
ATOM 19 N6 A B 49 -10.407 52.283 5.402 1.00 30.34 N
ATOM 20 N1 A B 49 -11.508 51.839 7.393 1.00 30.32 N
ATOM 21 C2 A B 49 -12.557 51.299 8.029 1.00 30.39 C
ATOM 22 N3 A B 49 -13.604 50.654 7.512 1.00 30.39 N
ATOM 23 C4 A B 49 -13.519 50.580 6.172 1.00 30.35 C
ATOM 24 P A B 50 -19.207 52.311 4.494 1.00 29.81 P
ATOM 25 OP1 A B 50 -20.659 52.551 4.682 1.00 29.74 O
ATOM 26 OP2 A B 50 -18.592 52.547 3.169 1.00 29.52 O
ATOM 27 O5' A B 50 -18.391 53.177 5.562 1.00 30.13 O
TER
ATOM 2 P A A 41 -3.961 54.194 2.528 1.00 36.22 P
ATOM 3 OP1 A A 41 -2.655 53.577 2.193 1.00 36.22 O
ATOM 4 OP2 A A 41 -5.215 53.428 2.327 1.00 36.05 O
ATOM 5 O5' A A 41 -3.930 54.723 4.042 1.00 34.85 O
ATOM 6 C5' A A 41 -2.728 54.709 4.808 1.00 32.07 C
ATOM 7 C4' A A 41 -2.907 53.869 6.056 1.00 29.79 C
ATOM 8 O4' A A 41 -4.234 54.065 6.602 1.00 28.78 O
ATOM 9 C3' A A 41 -2.764 52.364 5.839 1.00 29.49 C
ATOM 10 O3' A A 41 -1.633 51.849 6.562 1.00 30.77 O
ATOM 11 C2' A A 41 -4.083 51.790 6.366 1.00 28.43 C
ATOM 12 O2' A A 41 -3.930 50.592 7.101 1.00 28.43 O
ATOM 13 C1' A A 41 -4.544 52.889 7.309 1.00 27.14 C
ATOM 14 N9 A A 41 -5.965 52.817 7.655 1.00 25.74 N
ATOM 15 C8 A A 41 -7.017 52.762 6.789 1.00 25.02 C
ATOM 16 N7 A A 41 -8.185 52.693 7.378 1.00 24.79 N
ATOM 17 C5 A A 41 -7.884 52.701 8.726 1.00 24.38 C
ATOM 18 C6 A A 41 -8.696 52.646 9.877 1.00 23.93 C
ATOM 19 N6 A A 41 -10.027 52.571 9.819 1.00 24.87 N
ATOM 20 N1 A A 41 -8.091 52.674 11.084 1.00 23.50 N
ATOM 21 C2 A A 41 -6.754 52.752 11.127 1.00 23.95 C
ATOM 22 N3 A A 41 -5.885 52.805 10.112 1.00 24.38 N
ATOM 23 C4 A A 41 -6.518 52.778 8.921 1.00 24.82 C
ATOM 24 P G A 42 -0.129 52.227 6.154 1.00 30.70 P
ATOM 25 OP1 G A 42 0.099 53.637 6.552 1.00 31.25 O
ATOM 26 OP2 G A 42 0.043 51.820 4.741 1.00 30.94 O
ATOM 27 O5' G A 42 0.785 51.281 7.061 1.00 30.11 O
TER
ATOM 1 O3' G B 48 -16.087 48.098 0.310 1.00 32.27 O
ATOM 2 P A B 49 -16.431 49.660 0.452 1.00 31.93 P
ATOM 3 OP1 A B 49 -17.735 49.919 -0.202 1.00 32.05 O
ATOM 4 OP2 A B 49 -15.261 50.469 0.041 1.00 31.74 O
ATOM 5 O5' A B 49 -16.603 49.770 2.037 1.00 31.25 O
ATOM 6 C5' A B 49 -17.614 48.995 2.671 1.00 30.98 C
ATOM 7 C4' A B 49 -17.451 49.019 4.174 1.00 30.79 C
ATOM 8 O4' A B 49 -16.125 48.566 4.530 1.00 30.76 O
ATOM 9 C3' A B 49 -17.523 50.398 4.799 1.00 30.43 C
ATOM 10 O3' A B 49 -18.866 50.819 4.952 1.00 29.56 O
ATOM 11 C2' A B 49 -16.805 50.176 6.123 1.00 30.55 C
ATOM 12 O2' A B 49 -17.578 49.456 7.061 1.00 30.98 O
ATOM 13 C1' A B 49 -15.656 49.296 5.654 1.00 30.55 C
ATOM 14 N9 A B 49 -14.414 49.996 5.305 1.00 30.50 N
ATOM 15 C8 A B 49 -13.886 50.180 4.054 1.00 30.46 C
ATOM 16 N7 A B 49 -12.746 50.827 4.040 1.00 30.15 N
ATOM 17 C5 A B 49 -12.505 51.087 5.378 1.00 30.32 C
ATOM 18 C6 A B 49 -11.450 51.748 6.043 1.00 30.37 C
ATOM 19 N6 A B 49 -10.407 52.283 5.402 1.00 30.34 N
ATOM 20 N1 A B 49 -11.508 51.839 7.393 1.00 30.32 N
ATOM 21 C2 A B 49 -12.557 51.299 8.029 1.00 30.39 C
ATOM 22 N3 A B 49 -13.604 50.654 7.512 1.00 30.39 N
ATOM 23 C4 A B 49 -13.519 50.580 6.172 1.00 30.35 C
ATOM 24 P A B 50 -19.207 52.311 4.494 1.00 29.81 P
ATOM 25 OP1 A B 50 -20.659 52.551 4.682 1.00 29.74 O
ATOM 26 OP2 A B 50 -18.592 52.547 3.169 1.00 29.52 O
ATOM 27 O5' A B 50 -18.391 53.177 5.562 1.00 30.13 O
TER
Atoms:
OP1: (-2.655,53.577,2.193)
OP2: (-5.215,53.428,2.327)
C3': (-2.764,52.364,5.839)
C1': (-4.544,52.889,7.309)
C5': (-2.728,54.709,4.808)
O4': (-4.234,54.065,6.602)
C8: (-7.017,52.762,6.789)
O2': (-3.930,50.592,7.101)
C6: (-8.696,52.646,9.877)
C5: (-7.884,52.701,8.726)
C4: (-6.518,52.778,8.921)
P: (-3.961,54.194,2.528)
C4': (-2.907,53.869,6.056)
C2': (-4.083,51.790,6.366)
C2: (-6.754,52.752,11.127)
N1: (-8.091,52.674,11.084)
N3: (-5.885,52.805,10.112)
N6: (-10.027,52.571,9.819)
N7: (-8.185,52.693,7.378)
N9: (-5.965,52.817,7.655)
O5': (-3.930,54.723,4.042)
O3': (-1.633,51.849,6.562)
OP2: (-5.215,53.428,2.327)
C3': (-2.764,52.364,5.839)
C1': (-4.544,52.889,7.309)
C5': (-2.728,54.709,4.808)
O4': (-4.234,54.065,6.602)
C8: (-7.017,52.762,6.789)
O2': (-3.930,50.592,7.101)
C6: (-8.696,52.646,9.877)
C5: (-7.884,52.701,8.726)
C4: (-6.518,52.778,8.921)
P: (-3.961,54.194,2.528)
C4': (-2.907,53.869,6.056)
C2': (-4.083,51.790,6.366)
C2: (-6.754,52.752,11.127)
N1: (-8.091,52.674,11.084)
N3: (-5.885,52.805,10.112)
N6: (-10.027,52.571,9.819)
N7: (-8.185,52.693,7.378)
N9: (-5.965,52.817,7.655)
O5': (-3.930,54.723,4.042)
O3': (-1.633,51.849,6.562)
OP1: (-17.735,49.919,-0.202)
OP2: (-15.261,50.469,0.041)
C3': (-17.523,50.398,4.799)
C1': (-15.656,49.296,5.654)
C5': (-17.614,48.995,2.671)
O4': (-16.125,48.566,4.530)
C8: (-13.886,50.180,4.054)
O2': (-17.578,49.456,7.061)
C6: (-11.450,51.748,6.043)
C5: (-12.505,51.087,5.378)
C4: (-13.519,50.580,6.172)
P: (-16.431,49.660,0.452)
C4': (-17.451,49.019,4.174)
C2': (-16.805,50.176,6.123)
C2: (-12.557,51.299,8.029)
N1: (-11.508,51.839,7.393)
N3: (-13.604,50.654,7.512)
N6: (-10.407,52.283,5.402)
N7: (-12.746,50.827,4.040)
N9: (-14.414,49.996,5.305)
O5': (-16.603,49.770,2.037)
O3': (-18.866,50.819,4.952)
OP2: (-15.261,50.469,0.041)
C3': (-17.523,50.398,4.799)
C1': (-15.656,49.296,5.654)
C5': (-17.614,48.995,2.671)
O4': (-16.125,48.566,4.530)
C8: (-13.886,50.180,4.054)
O2': (-17.578,49.456,7.061)
C6: (-11.450,51.748,6.043)
C5: (-12.505,51.087,5.378)
C4: (-13.519,50.580,6.172)
P: (-16.431,49.660,0.452)
C4': (-17.451,49.019,4.174)
C2': (-16.805,50.176,6.123)
C2: (-12.557,51.299,8.029)
N1: (-11.508,51.839,7.393)
N3: (-13.604,50.654,7.512)
N6: (-10.407,52.283,5.402)
N7: (-12.746,50.827,4.040)
N9: (-14.414,49.996,5.305)
O5': (-16.603,49.770,2.037)
O3': (-18.866,50.819,4.952)
Image (generated by PyMOL):