ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OI1:A496:A520

Extra

PDB:
ATOM 1 O3' G A 495 232.194 -77.413-100.086 1.00 85.64 O
ATOM 2 P A A 496 231.821 -78.993-100.228 1.00 65.28 P
ATOM 3 OP1 A A 496 233.039 -79.653-100.772 1.00 78.20 O
ATOM 4 OP2 A A 496 230.555 -79.115-100.963 1.00 70.90 O
ATOM 5 O5' A A 496 231.601 -79.465 -98.723 1.00 63.95 O
ATOM 6 C5' A A 496 232.641 -79.392 -97.754 1.00 57.42 C
ATOM 7 C4' A A 496 232.187 -79.994 -96.450 1.00 59.90 C
ATOM 8 O4' A A 496 230.778 -79.675 -96.241 1.00 75.86 O
ATOM 9 C3' A A 496 232.227 -81.514 -96.379 1.00 53.88 C
ATOM 10 O3' A A 496 233.504 -82.017 -96.049 1.00 50.39 O
ATOM 11 C2' A A 496 231.158 -81.836 -95.351 1.00 58.92 C
ATOM 12 O2' A A 496 231.634 -81.572 -94.040 1.00 61.99 O
ATOM 13 C1' A A 496 230.106 -80.785 -95.689 1.00 58.68 C
ATOM 14 N9 A A 496 229.138 -81.269 -96.681 1.00 61.47 N
ATOM 15 C8 A A 496 229.178 -81.071 -98.040 1.00 58.40 C
ATOM 16 N7 A A 496 228.152 -81.615 -98.653 1.00 63.32 N
ATOM 17 C5 A A 496 227.389 -82.197 -97.636 1.00 56.32 C
ATOM 18 C6 A A 496 226.184 -82.924 -97.635 1.00 58.57 C
ATOM 19 N6 A A 496 225.476 -83.205 -98.740 1.00 64.86 N
ATOM 20 N1 A A 496 225.712 -83.365 -96.451 1.00 62.68 N
ATOM 21 C2 A A 496 226.402 -83.083 -95.344 1.00 63.42 C
ATOM 22 N3 A A 496 227.540 -82.405 -95.213 1.00 65.72 N
ATOM 23 C4 A A 496 227.987 -81.983 -96.414 1.00 64.81 C
ATOM 24 P A A 497 234.344 -82.837 -97.154 1.00 75.37 P
ATOM 25 OP1 A A 497 234.254 -82.058 -98.433 1.00 75.52 O
ATOM 26 OP2 A A 497 233.848 -84.244 -97.120 1.00 54.71 O
ATOM 27 O5' A A 497 235.838 -82.779 -96.605 1.00 69.91 O
TER

ATOM 1 O3' G B 519 221.858 -82.062-101.891 1.00 55.56 O
ATOM 2 P A B 520 221.261 -83.040-103.045 1.00 76.03 P
ATOM 3 OP1 A B 520 219.774 -83.000-102.943 1.00 63.95 O
ATOM 4 OP2 A B 520 221.947 -84.368-102.909 1.00 49.05 O
ATOM 5 O5' A B 520 221.708 -82.298-104.379 1.00 48.75 O
ATOM 6 C5' A B 520 220.772 -81.484-105.074 1.00 54.90 C
ATOM 7 C4' A B 520 221.393 -80.204-105.548 1.00 58.24 C
ATOM 8 O4' A B 520 221.839 -79.447-104.407 1.00 48.49 O
ATOM 9 C3' A B 520 222.630 -80.356-106.446 1.00 68.09 C
ATOM 10 O3' A B 520 222.301 -80.474-107.825 1.00 70.85 O
ATOM 11 C2' A B 520 223.443 -79.109-106.144 1.00 60.92 C
ATOM 12 O2' A B 520 223.004 -78.018-106.940 1.00 77.79 O
ATOM 13 C1' A B 520 223.081 -78.834-104.685 1.00 65.89 C
ATOM 14 N9 A B 520 224.097 -79.380-103.765 1.00 69.00 N
ATOM 15 C8 A B 520 224.001 -80.424-102.862 1.00 60.22 C
ATOM 16 N7 A B 520 225.117 -80.625-102.195 1.00 57.16 N
ATOM 17 C5 A B 520 225.988 -79.655-102.706 1.00 59.11 C
ATOM 18 C6 A B 520 227.320 -79.332-102.422 1.00 56.77 C
ATOM 19 N6 A B 520 228.040 -79.994-101.514 1.00 64.79 N
ATOM 20 N1 A B 520 227.885 -78.301-103.097 1.00 53.29 N
ATOM 21 C2 A B 520 227.159 -77.625-103.998 1.00 58.39 C
ATOM 22 N3 A B 520 225.895 -77.827-104.360 1.00 62.59 N
ATOM 23 C4 A B 520 225.373 -78.871-103.669 1.00 67.47 C
ATOM 24 P G B 521 222.448 -81.878-108.584 1.00 68.07 P
ATOM 25 OP1 G B 521 222.418 -82.947-107.548 1.00 73.96 O
ATOM 26 OP2 G B 521 223.638 -81.766-109.450 1.00 98.92 O
ATOM 27 O5' G B 521 221.117 -81.935-109.493 1.00105.63 O
TER

Atoms:
OP1: (233.039,-79.653,-100.772)
OP2: (230.555,-79.115,-100.963)
C3': (232.227,-81.514,-96.379)
C1': (230.106,-80.785,-95.689)
C5': (232.641,-79.392,-97.754)
O4': (230.778,-79.675,-96.241)
C8: (229.178,-81.071,-98.040)
O2': (231.634,-81.572,-94.040)
C6: (226.184,-82.924,-97.635)
C5: (227.389,-82.197,-97.636)
C4: (227.987,-81.983,-96.414)
P: (231.821,-78.993,-100.228)
C4': (232.187,-79.994,-96.450)
C2': (231.158,-81.836,-95.351)
C2: (226.402,-83.083,-95.344)
N1: (225.712,-83.365,-96.451)
N3: (227.540,-82.405,-95.213)
N6: (225.476,-83.205,-98.740)
N7: (228.152,-81.615,-98.653)
N9: (229.138,-81.269,-96.681)
O5': (231.601,-79.465,-98.723)
O3': (233.504,-82.017,-96.049)
OP1: (219.774,-83.000,-102.943)
OP2: (221.947,-84.368,-102.909)
C3': (222.630,-80.356,-106.446)
C1': (223.081,-78.834,-104.685)
C5': (220.772,-81.484,-105.074)
O4': (221.839,-79.447,-104.407)
C8: (224.001,-80.424,-102.862)
O2': (223.004,-78.018,-106.940)
C6: (227.320,-79.332,-102.422)
C5: (225.988,-79.655,-102.706)
C4: (225.373,-78.871,-103.669)
P: (221.261,-83.040,-103.045)
C4': (221.393,-80.204,-105.548)
C2': (223.443,-79.109,-106.144)
C2: (227.159,-77.625,-103.998)
N1: (227.885,-78.301,-103.097)
N3: (225.895,-77.827,-104.360)
N6: (228.040,-79.994,-101.514)
N7: (225.117,-80.625,-102.195)
N9: (224.097,-79.380,-103.765)
O5': (221.708,-82.298,-104.379)
O3': (222.301,-80.474,-107.825)
Image (generated by PyMOL):
PyMOL image
show in jmol