Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:B67:B42
Extra
PDB:
ATOM 1 O3' C A 66 2.057 -0.539 7.596 1.00 31.33 O
ATOM 2 P A A 67 2.494 -1.858 6.780 1.00 30.38 P
ATOM 3 OP1 A A 67 3.913 -2.222 7.082 1.00 30.65 O
ATOM 4 OP2 A A 67 2.071 -1.649 5.374 1.00 30.42 O
ATOM 5 O5' A A 67 1.576 -3.009 7.381 1.00 31.77 O
ATOM 6 C5' A A 67 0.342 -3.375 6.750 1.00 31.03 C
ATOM 7 C4' A A 67 0.485 -4.721 6.094 1.00 30.67 C
ATOM 8 O4' A A 67 0.908 -5.707 7.065 1.00 30.53 O
ATOM 9 C3' A A 67 -0.798 -5.261 5.514 1.00 30.30 C
ATOM 10 O3' A A 67 -0.942 -4.744 4.209 1.00 30.82 O
ATOM 11 C2' A A 67 -0.582 -6.770 5.539 1.00 30.43 C
ATOM 12 O2' A A 67 0.131 -7.248 4.416 1.00 31.36 O
ATOM 13 C1' A A 67 0.272 -6.943 6.800 1.00 29.59 C
ATOM 14 N9 A A 67 -0.504 -7.302 7.984 1.00 28.09 N
ATOM 15 C8 A A 67 -0.880 -6.469 9.008 1.00 26.76 C
ATOM 16 N7 A A 67 -1.600 -7.054 9.926 1.00 27.02 N
ATOM 17 C5 A A 67 -1.701 -8.367 9.485 1.00 27.12 C
ATOM 18 C6 A A 67 -2.348 -9.498 10.018 1.00 26.15 C
ATOM 19 N6 A A 67 -3.038 -9.486 11.159 1.00 25.28 N
ATOM 20 N1 A A 67 -2.259 -10.656 9.328 1.00 27.04 N
ATOM 21 C2 A A 67 -1.561 -10.668 8.185 1.00 26.50 C
ATOM 22 N3 A A 67 -0.910 -9.671 7.584 1.00 27.46 N
ATOM 23 C4 A A 67 -1.023 -8.535 8.293 1.00 27.49 C
ATOM 24 P G A 68 -2.355 -4.151 3.742 1.00 31.98 P
ATOM 25 OP1 G A 68 -2.128 -3.475 2.434 1.00 32.36 O
ATOM 26 OP2 G A 68 -2.934 -3.391 4.870 1.00 31.62 O
ATOM 27 O5' G A 68 -3.248 -5.453 3.517 1.00 31.55 O
TER
ATOM 1 O3' G B 41 -11.443 -3.173 15.432 1.00 29.84 O
ATOM 2 P A B 42 -9.858 -3.346 15.280 1.00 28.02 P
ATOM 3 OP1 A B 42 -9.237 -2.007 15.237 1.00 29.77 O
ATOM 4 OP2 A B 42 -9.631 -4.293 14.169 1.00 30.26 O
ATOM 5 O5' A B 42 -9.396 -4.058 16.615 1.00 26.52 O
ATOM 6 C5' A B 42 -10.010 -5.269 17.012 1.00 24.93 C
ATOM 7 C4' A B 42 -8.995 -6.162 17.641 1.00 23.06 C
ATOM 8 O4' A B 42 -7.993 -6.488 16.647 1.00 22.77 O
ATOM 9 C3' A B 42 -8.273 -5.571 18.839 1.00 23.07 C
ATOM 10 O3' A B 42 -8.167 -6.538 19.865 1.00 24.23 O
ATOM 11 C2' A B 42 -6.897 -5.212 18.294 1.00 22.97 C
ATOM 12 O2' A B 42 -5.879 -5.421 19.256 1.00 24.14 O
ATOM 13 C1' A B 42 -6.713 -6.219 17.161 1.00 22.43 C
ATOM 14 N9 A B 42 -5.856 -5.728 16.077 1.00 21.00 N
ATOM 15 C8 A B 42 -5.436 -4.438 15.859 1.00 21.01 C
ATOM 16 N7 A B 42 -4.618 -4.312 14.847 1.00 20.73 N
ATOM 17 C5 A B 42 -4.496 -5.603 14.352 1.00 21.05 C
ATOM 18 C6 A B 42 -3.746 -6.146 13.280 1.00 21.07 C
ATOM 19 N6 A B 42 -2.924 -5.429 12.514 1.00 22.30 N
ATOM 20 N1 A B 42 -3.864 -7.468 13.035 1.00 20.25 N
ATOM 21 C2 A B 42 -4.662 -8.190 13.828 1.00 20.92 C
ATOM 22 N3 A B 42 -5.400 -7.800 14.875 1.00 21.07 N
ATOM 23 C4 A B 42 -5.271 -6.481 15.087 1.00 20.23 C
ATOM 24 P A B 43 -9.142 -6.448 21.141 1.00 25.56 P
ATOM 25 OP1 A B 43 -9.894 -5.167 21.111 1.00 24.02 O
ATOM 26 OP2 A B 43 -8.332 -6.800 22.330 1.00 26.07 O
ATOM 27 O5' A B 43 -10.179 -7.632 20.917 1.00 25.17 O
TER
ATOM 2 P A A 67 2.494 -1.858 6.780 1.00 30.38 P
ATOM 3 OP1 A A 67 3.913 -2.222 7.082 1.00 30.65 O
ATOM 4 OP2 A A 67 2.071 -1.649 5.374 1.00 30.42 O
ATOM 5 O5' A A 67 1.576 -3.009 7.381 1.00 31.77 O
ATOM 6 C5' A A 67 0.342 -3.375 6.750 1.00 31.03 C
ATOM 7 C4' A A 67 0.485 -4.721 6.094 1.00 30.67 C
ATOM 8 O4' A A 67 0.908 -5.707 7.065 1.00 30.53 O
ATOM 9 C3' A A 67 -0.798 -5.261 5.514 1.00 30.30 C
ATOM 10 O3' A A 67 -0.942 -4.744 4.209 1.00 30.82 O
ATOM 11 C2' A A 67 -0.582 -6.770 5.539 1.00 30.43 C
ATOM 12 O2' A A 67 0.131 -7.248 4.416 1.00 31.36 O
ATOM 13 C1' A A 67 0.272 -6.943 6.800 1.00 29.59 C
ATOM 14 N9 A A 67 -0.504 -7.302 7.984 1.00 28.09 N
ATOM 15 C8 A A 67 -0.880 -6.469 9.008 1.00 26.76 C
ATOM 16 N7 A A 67 -1.600 -7.054 9.926 1.00 27.02 N
ATOM 17 C5 A A 67 -1.701 -8.367 9.485 1.00 27.12 C
ATOM 18 C6 A A 67 -2.348 -9.498 10.018 1.00 26.15 C
ATOM 19 N6 A A 67 -3.038 -9.486 11.159 1.00 25.28 N
ATOM 20 N1 A A 67 -2.259 -10.656 9.328 1.00 27.04 N
ATOM 21 C2 A A 67 -1.561 -10.668 8.185 1.00 26.50 C
ATOM 22 N3 A A 67 -0.910 -9.671 7.584 1.00 27.46 N
ATOM 23 C4 A A 67 -1.023 -8.535 8.293 1.00 27.49 C
ATOM 24 P G A 68 -2.355 -4.151 3.742 1.00 31.98 P
ATOM 25 OP1 G A 68 -2.128 -3.475 2.434 1.00 32.36 O
ATOM 26 OP2 G A 68 -2.934 -3.391 4.870 1.00 31.62 O
ATOM 27 O5' G A 68 -3.248 -5.453 3.517 1.00 31.55 O
TER
ATOM 1 O3' G B 41 -11.443 -3.173 15.432 1.00 29.84 O
ATOM 2 P A B 42 -9.858 -3.346 15.280 1.00 28.02 P
ATOM 3 OP1 A B 42 -9.237 -2.007 15.237 1.00 29.77 O
ATOM 4 OP2 A B 42 -9.631 -4.293 14.169 1.00 30.26 O
ATOM 5 O5' A B 42 -9.396 -4.058 16.615 1.00 26.52 O
ATOM 6 C5' A B 42 -10.010 -5.269 17.012 1.00 24.93 C
ATOM 7 C4' A B 42 -8.995 -6.162 17.641 1.00 23.06 C
ATOM 8 O4' A B 42 -7.993 -6.488 16.647 1.00 22.77 O
ATOM 9 C3' A B 42 -8.273 -5.571 18.839 1.00 23.07 C
ATOM 10 O3' A B 42 -8.167 -6.538 19.865 1.00 24.23 O
ATOM 11 C2' A B 42 -6.897 -5.212 18.294 1.00 22.97 C
ATOM 12 O2' A B 42 -5.879 -5.421 19.256 1.00 24.14 O
ATOM 13 C1' A B 42 -6.713 -6.219 17.161 1.00 22.43 C
ATOM 14 N9 A B 42 -5.856 -5.728 16.077 1.00 21.00 N
ATOM 15 C8 A B 42 -5.436 -4.438 15.859 1.00 21.01 C
ATOM 16 N7 A B 42 -4.618 -4.312 14.847 1.00 20.73 N
ATOM 17 C5 A B 42 -4.496 -5.603 14.352 1.00 21.05 C
ATOM 18 C6 A B 42 -3.746 -6.146 13.280 1.00 21.07 C
ATOM 19 N6 A B 42 -2.924 -5.429 12.514 1.00 22.30 N
ATOM 20 N1 A B 42 -3.864 -7.468 13.035 1.00 20.25 N
ATOM 21 C2 A B 42 -4.662 -8.190 13.828 1.00 20.92 C
ATOM 22 N3 A B 42 -5.400 -7.800 14.875 1.00 21.07 N
ATOM 23 C4 A B 42 -5.271 -6.481 15.087 1.00 20.23 C
ATOM 24 P A B 43 -9.142 -6.448 21.141 1.00 25.56 P
ATOM 25 OP1 A B 43 -9.894 -5.167 21.111 1.00 24.02 O
ATOM 26 OP2 A B 43 -8.332 -6.800 22.330 1.00 26.07 O
ATOM 27 O5' A B 43 -10.179 -7.632 20.917 1.00 25.17 O
TER
Atoms:
OP1: (3.913,-2.222,7.082)
OP2: (2.071,-1.649,5.374)
C3': (-0.798,-5.261,5.514)
C1': (0.272,-6.943,6.800)
C5': (0.342,-3.375,6.750)
O4': (0.908,-5.707,7.065)
C8: (-0.880,-6.469,9.008)
O2': (0.131,-7.248,4.416)
C6: (-2.348,-9.498,10.018)
C5: (-1.701,-8.367,9.485)
C4: (-1.023,-8.535,8.293)
P: (2.494,-1.858,6.780)
C4': (0.485,-4.721,6.094)
C2': (-0.582,-6.770,5.539)
C2: (-1.561,-10.668,8.185)
N1: (-2.259,-10.656,9.328)
N3: (-0.910,-9.671,7.584)
N6: (-3.038,-9.486,11.159)
N7: (-1.600,-7.054,9.926)
N9: (-0.504,-7.302,7.984)
O5': (1.576,-3.009,7.381)
O3': (-0.942,-4.744,4.209)
OP2: (2.071,-1.649,5.374)
C3': (-0.798,-5.261,5.514)
C1': (0.272,-6.943,6.800)
C5': (0.342,-3.375,6.750)
O4': (0.908,-5.707,7.065)
C8: (-0.880,-6.469,9.008)
O2': (0.131,-7.248,4.416)
C6: (-2.348,-9.498,10.018)
C5: (-1.701,-8.367,9.485)
C4: (-1.023,-8.535,8.293)
P: (2.494,-1.858,6.780)
C4': (0.485,-4.721,6.094)
C2': (-0.582,-6.770,5.539)
C2: (-1.561,-10.668,8.185)
N1: (-2.259,-10.656,9.328)
N3: (-0.910,-9.671,7.584)
N6: (-3.038,-9.486,11.159)
N7: (-1.600,-7.054,9.926)
N9: (-0.504,-7.302,7.984)
O5': (1.576,-3.009,7.381)
O3': (-0.942,-4.744,4.209)
OP1: (-9.237,-2.007,15.237)
OP2: (-9.631,-4.293,14.169)
C3': (-8.273,-5.571,18.839)
C1': (-6.713,-6.219,17.161)
C5': (-10.010,-5.269,17.012)
O4': (-7.993,-6.488,16.647)
C8: (-5.436,-4.438,15.859)
O2': (-5.879,-5.421,19.256)
C6: (-3.746,-6.146,13.280)
C5: (-4.496,-5.603,14.352)
C4: (-5.271,-6.481,15.087)
P: (-9.858,-3.346,15.280)
C4': (-8.995,-6.162,17.641)
C2': (-6.897,-5.212,18.294)
C2: (-4.662,-8.190,13.828)
N1: (-3.864,-7.468,13.035)
N3: (-5.400,-7.800,14.875)
N6: (-2.924,-5.429,12.514)
N7: (-4.618,-4.312,14.847)
N9: (-5.856,-5.728,16.077)
O5': (-9.396,-4.058,16.615)
O3': (-8.167,-6.538,19.865)
OP2: (-9.631,-4.293,14.169)
C3': (-8.273,-5.571,18.839)
C1': (-6.713,-6.219,17.161)
C5': (-10.010,-5.269,17.012)
O4': (-7.993,-6.488,16.647)
C8: (-5.436,-4.438,15.859)
O2': (-5.879,-5.421,19.256)
C6: (-3.746,-6.146,13.280)
C5: (-4.496,-5.603,14.352)
C4: (-5.271,-6.481,15.087)
P: (-9.858,-3.346,15.280)
C4': (-8.995,-6.162,17.641)
C2': (-6.897,-5.212,18.294)
C2: (-4.662,-8.190,13.828)
N1: (-3.864,-7.468,13.035)
N3: (-5.400,-7.800,14.875)
N6: (-2.924,-5.429,12.514)
N7: (-4.618,-4.312,14.847)
N9: (-5.856,-5.728,16.077)
O5': (-9.396,-4.058,16.615)
O3': (-8.167,-6.538,19.865)
Image (generated by PyMOL):