Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MJI:D8:D9
Extra
PDB:
ATOM 1 O3' G A 7 -2.576 -1.553 35.227 1.00 37.15 O
ATOM 2 P A A 8 -1.772 -2.705 36.011 1.00 41.87 P
ATOM 3 OP1 A A 8 -2.329 -2.758 37.390 1.00 43.55 O
ATOM 4 OP2 A A 8 -0.310 -2.453 35.819 1.00 41.69 O
ATOM 5 O5' A A 8 -2.107 -4.048 35.206 1.00 44.57 O
ATOM 6 C5' A A 8 -3.351 -4.756 35.351 1.00 46.32 C
ATOM 7 C4' A A 8 -3.284 -6.064 34.580 1.00 48.82 C
ATOM 8 O4' A A 8 -2.819 -5.733 33.248 1.00 46.52 O
ATOM 9 C3' A A 8 -2.275 -7.073 35.130 1.00 52.27 C
ATOM 10 O3' A A 8 -2.838 -8.102 35.977 1.00 62.72 O
ATOM 11 C2' A A 8 -1.710 -7.765 33.888 1.00 49.45 C
ATOM 12 O2' A A 8 -2.336 -8.996 33.585 1.00 51.60 O
ATOM 13 C1' A A 8 -1.962 -6.744 32.775 1.00 45.02 C
ATOM 14 N9 A A 8 -0.768 -6.125 32.212 1.00 39.42 N
ATOM 15 C8 A A 8 -0.076 -5.015 32.623 1.00 38.28 C
ATOM 16 N7 A A 8 0.957 -4.731 31.868 1.00 36.56 N
ATOM 17 C5 A A 8 0.938 -5.723 30.899 1.00 35.27 C
ATOM 18 C6 A A 8 1.764 -5.988 29.807 1.00 34.49 C
ATOM 19 N6 A A 8 2.822 -5.244 29.488 1.00 32.94 N
ATOM 20 N1 A A 8 1.467 -7.059 29.038 1.00 33.44 N
ATOM 21 C2 A A 8 0.411 -7.802 29.356 1.00 33.39 C
ATOM 22 N3 A A 8 -0.440 -7.657 30.358 1.00 35.73 N
ATOM 23 C4 A A 8 -0.115 -6.585 31.101 1.00 36.73 C
ATOM 24 P C A 9 -4.423 -8.472 35.919 1.00 69.80 P
ATOM 25 OP1 C A 9 -4.964 -8.289 34.540 1.00 69.66 O
ATOM 26 OP2 C A 9 -5.103 -7.809 37.067 1.00 69.04 O
ATOM 27 O5' C A 9 -4.462 -10.046 36.197 1.00 73.71 O
TER
ATOM 1 O3' A B 8 -2.838 -8.102 35.977 1.00 62.72 O
ATOM 2 P C B 9 -4.423 -8.472 35.919 1.00 69.80 P
ATOM 3 OP1 C B 9 -4.964 -8.289 34.540 1.00 69.66 O
ATOM 4 OP2 C B 9 -5.103 -7.809 37.067 1.00 69.04 O
ATOM 5 O5' C B 9 -4.462 -10.046 36.197 1.00 73.71 O
ATOM 6 C5' C B 9 -3.292 -10.758 36.619 1.00 82.07 C
ATOM 7 C4' C B 9 -2.706 -11.553 35.463 1.00 86.91 C
ATOM 8 O4' C B 9 -1.437 -12.143 35.872 1.00 89.16 O
ATOM 9 C3' C B 9 -3.515 -12.745 34.967 1.00 88.67 C
ATOM 10 O3' C B 9 -4.558 -12.364 34.076 1.00 88.54 O
ATOM 11 C2' C B 9 -2.446 -13.586 34.274 1.00 90.32 C
ATOM 12 O2' C B 9 -2.127 -13.142 32.966 1.00 91.00 O
ATOM 13 C1' C B 9 -1.256 -13.394 35.221 1.00 91.50 C
ATOM 14 N1 C B 9 -1.220 -14.451 36.246 1.00 94.17 N
ATOM 15 C2 C B 9 -0.409 -15.575 36.030 1.00 95.57 C
ATOM 16 O2 C B 9 0.297 -15.621 35.006 1.00 95.26 O
ATOM 17 N3 C B 9 -0.416 -16.579 36.944 1.00 97.02 N
ATOM 18 C4 C B 9 -1.183 -16.485 38.036 1.00 96.96 C
ATOM 19 N4 C B 9 -1.169 -17.504 38.904 1.00 96.90 N
ATOM 20 C5 C B 9 -2.000 -15.342 38.287 1.00 96.51 C
ATOM 21 C6 C B 9 -1.984 -14.357 37.378 1.00 95.24 C
ATOM 22 P C B 10 -5.863 -13.296 33.940 1.00 87.99 P
ATOM 23 OP1 C B 10 -7.024 -12.425 33.612 1.00 87.31 O
ATOM 24 OP2 C B 10 -5.912 -14.169 35.147 1.00 88.05 O
ATOM 25 O5' C B 10 -5.555 -14.224 32.680 1.00 85.09 O
TER
ATOM 2 P A A 8 -1.772 -2.705 36.011 1.00 41.87 P
ATOM 3 OP1 A A 8 -2.329 -2.758 37.390 1.00 43.55 O
ATOM 4 OP2 A A 8 -0.310 -2.453 35.819 1.00 41.69 O
ATOM 5 O5' A A 8 -2.107 -4.048 35.206 1.00 44.57 O
ATOM 6 C5' A A 8 -3.351 -4.756 35.351 1.00 46.32 C
ATOM 7 C4' A A 8 -3.284 -6.064 34.580 1.00 48.82 C
ATOM 8 O4' A A 8 -2.819 -5.733 33.248 1.00 46.52 O
ATOM 9 C3' A A 8 -2.275 -7.073 35.130 1.00 52.27 C
ATOM 10 O3' A A 8 -2.838 -8.102 35.977 1.00 62.72 O
ATOM 11 C2' A A 8 -1.710 -7.765 33.888 1.00 49.45 C
ATOM 12 O2' A A 8 -2.336 -8.996 33.585 1.00 51.60 O
ATOM 13 C1' A A 8 -1.962 -6.744 32.775 1.00 45.02 C
ATOM 14 N9 A A 8 -0.768 -6.125 32.212 1.00 39.42 N
ATOM 15 C8 A A 8 -0.076 -5.015 32.623 1.00 38.28 C
ATOM 16 N7 A A 8 0.957 -4.731 31.868 1.00 36.56 N
ATOM 17 C5 A A 8 0.938 -5.723 30.899 1.00 35.27 C
ATOM 18 C6 A A 8 1.764 -5.988 29.807 1.00 34.49 C
ATOM 19 N6 A A 8 2.822 -5.244 29.488 1.00 32.94 N
ATOM 20 N1 A A 8 1.467 -7.059 29.038 1.00 33.44 N
ATOM 21 C2 A A 8 0.411 -7.802 29.356 1.00 33.39 C
ATOM 22 N3 A A 8 -0.440 -7.657 30.358 1.00 35.73 N
ATOM 23 C4 A A 8 -0.115 -6.585 31.101 1.00 36.73 C
ATOM 24 P C A 9 -4.423 -8.472 35.919 1.00 69.80 P
ATOM 25 OP1 C A 9 -4.964 -8.289 34.540 1.00 69.66 O
ATOM 26 OP2 C A 9 -5.103 -7.809 37.067 1.00 69.04 O
ATOM 27 O5' C A 9 -4.462 -10.046 36.197 1.00 73.71 O
TER
ATOM 1 O3' A B 8 -2.838 -8.102 35.977 1.00 62.72 O
ATOM 2 P C B 9 -4.423 -8.472 35.919 1.00 69.80 P
ATOM 3 OP1 C B 9 -4.964 -8.289 34.540 1.00 69.66 O
ATOM 4 OP2 C B 9 -5.103 -7.809 37.067 1.00 69.04 O
ATOM 5 O5' C B 9 -4.462 -10.046 36.197 1.00 73.71 O
ATOM 6 C5' C B 9 -3.292 -10.758 36.619 1.00 82.07 C
ATOM 7 C4' C B 9 -2.706 -11.553 35.463 1.00 86.91 C
ATOM 8 O4' C B 9 -1.437 -12.143 35.872 1.00 89.16 O
ATOM 9 C3' C B 9 -3.515 -12.745 34.967 1.00 88.67 C
ATOM 10 O3' C B 9 -4.558 -12.364 34.076 1.00 88.54 O
ATOM 11 C2' C B 9 -2.446 -13.586 34.274 1.00 90.32 C
ATOM 12 O2' C B 9 -2.127 -13.142 32.966 1.00 91.00 O
ATOM 13 C1' C B 9 -1.256 -13.394 35.221 1.00 91.50 C
ATOM 14 N1 C B 9 -1.220 -14.451 36.246 1.00 94.17 N
ATOM 15 C2 C B 9 -0.409 -15.575 36.030 1.00 95.57 C
ATOM 16 O2 C B 9 0.297 -15.621 35.006 1.00 95.26 O
ATOM 17 N3 C B 9 -0.416 -16.579 36.944 1.00 97.02 N
ATOM 18 C4 C B 9 -1.183 -16.485 38.036 1.00 96.96 C
ATOM 19 N4 C B 9 -1.169 -17.504 38.904 1.00 96.90 N
ATOM 20 C5 C B 9 -2.000 -15.342 38.287 1.00 96.51 C
ATOM 21 C6 C B 9 -1.984 -14.357 37.378 1.00 95.24 C
ATOM 22 P C B 10 -5.863 -13.296 33.940 1.00 87.99 P
ATOM 23 OP1 C B 10 -7.024 -12.425 33.612 1.00 87.31 O
ATOM 24 OP2 C B 10 -5.912 -14.169 35.147 1.00 88.05 O
ATOM 25 O5' C B 10 -5.555 -14.224 32.680 1.00 85.09 O
TER
Atoms:
OP1: (-2.329,-2.758,37.390)
OP2: (-0.310,-2.453,35.819)
C3': (-2.275,-7.073,35.130)
C1': (-1.962,-6.744,32.775)
C5': (-3.351,-4.756,35.351)
O4': (-2.819,-5.733,33.248)
C8: (-0.076,-5.015,32.623)
O2': (-2.336,-8.996,33.585)
C6: (1.764,-5.988,29.807)
C5: (0.938,-5.723,30.899)
C4: (-0.115,-6.585,31.101)
P: (-1.772,-2.705,36.011)
C4': (-3.284,-6.064,34.580)
C2': (-1.710,-7.765,33.888)
C2: (0.411,-7.802,29.356)
N1: (1.467,-7.059,29.038)
N3: (-0.440,-7.657,30.358)
N6: (2.822,-5.244,29.488)
N7: (0.957,-4.731,31.868)
N9: (-0.768,-6.125,32.212)
O5': (-2.107,-4.048,35.206)
O3': (-2.838,-8.102,35.977)
OP2: (-0.310,-2.453,35.819)
C3': (-2.275,-7.073,35.130)
C1': (-1.962,-6.744,32.775)
C5': (-3.351,-4.756,35.351)
O4': (-2.819,-5.733,33.248)
C8: (-0.076,-5.015,32.623)
O2': (-2.336,-8.996,33.585)
C6: (1.764,-5.988,29.807)
C5: (0.938,-5.723,30.899)
C4: (-0.115,-6.585,31.101)
P: (-1.772,-2.705,36.011)
C4': (-3.284,-6.064,34.580)
C2': (-1.710,-7.765,33.888)
C2: (0.411,-7.802,29.356)
N1: (1.467,-7.059,29.038)
N3: (-0.440,-7.657,30.358)
N6: (2.822,-5.244,29.488)
N7: (0.957,-4.731,31.868)
N9: (-0.768,-6.125,32.212)
O5': (-2.107,-4.048,35.206)
O3': (-2.838,-8.102,35.977)
C2: (-0.409,-15.575,36.030)
OP1: (-4.964,-8.289,34.540)
OP2: (-5.103,-7.809,37.067)
C4: (-1.183,-16.485,38.036)
O5': (-4.462,-10.046,36.197)
C3': (-3.515,-12.745,34.967)
C1': (-1.256,-13.394,35.221)
O4': (-1.437,-12.143,35.872)
C5': (-3.292,-10.758,36.619)
P: (-4.423,-8.472,35.919)
O2: (0.297,-15.621,35.006)
C4': (-2.706,-11.553,35.463)
C2': (-2.446,-13.586,34.274)
O2': (-2.127,-13.142,32.966)
N1: (-1.220,-14.451,36.246)
N3: (-0.416,-16.579,36.944)
N4: (-1.169,-17.504,38.904)
C6: (-1.984,-14.357,37.378)
C5: (-2.000,-15.342,38.287)
O3': (-4.558,-12.364,34.076)
OP1: (-4.964,-8.289,34.540)
OP2: (-5.103,-7.809,37.067)
C4: (-1.183,-16.485,38.036)
O5': (-4.462,-10.046,36.197)
C3': (-3.515,-12.745,34.967)
C1': (-1.256,-13.394,35.221)
O4': (-1.437,-12.143,35.872)
C5': (-3.292,-10.758,36.619)
P: (-4.423,-8.472,35.919)
O2: (0.297,-15.621,35.006)
C4': (-2.706,-11.553,35.463)
C2': (-2.446,-13.586,34.274)
O2': (-2.127,-13.142,32.966)
N1: (-1.220,-14.451,36.246)
N3: (-0.416,-16.579,36.944)
N4: (-1.169,-17.504,38.904)
C6: (-1.984,-14.357,37.378)
C5: (-2.000,-15.342,38.287)
O3': (-4.558,-12.364,34.076)
Image (generated by PyMOL):