Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A272:A233
Extra
PDB:
ATOM 1 O3' G A 271 3.716 78.946 98.544 1.00 13.94 O
ATOM 2 P A A 272 3.285 77.702 99.485 1.00 20.21 P
ATOM 3 OP1 A A 272 3.354 76.456 98.660 1.00 15.58 O
ATOM 4 OP2 A A 272 2.033 78.018 100.231 1.00 15.46 O
ATOM 5 O5' A A 272 4.469 77.607 100.542 1.00 25.57 O
ATOM 6 C5' A A 272 5.746 77.069 100.161 1.00 24.19 C
ATOM 7 C4' A A 272 6.851 77.887 100.771 1.00 24.19 C
ATOM 8 O4' A A 272 6.778 79.243 100.253 1.00 25.66 O
ATOM 9 C3' A A 272 6.765 78.037 102.278 1.00 24.41 C
ATOM 10 O3' A A 272 7.396 76.943 102.944 1.00 25.90 O
ATOM 11 C2' A A 272 7.489 79.359 102.503 1.00 24.94 C
ATOM 12 O2' A A 272 8.897 79.201 102.457 1.00 25.50 O
ATOM 13 C1' A A 272 7.046 80.172 101.283 1.00 24.20 C
ATOM 14 N9 A A 272 5.815 80.935 101.526 1.00 5.81 N
ATOM 15 C8 A A 272 4.645 80.908 100.801 1.00 4.74 C
ATOM 16 N7 A A 272 3.695 81.669 101.291 1.00 3.30 N
ATOM 17 C5 A A 272 4.280 82.243 102.404 1.00 3.30 C
ATOM 18 C6 A A 272 3.795 83.134 103.352 1.00 3.30 C
ATOM 19 N6 A A 272 2.556 83.626 103.342 1.00 3.30 N
ATOM 20 N1 A A 272 4.628 83.512 104.335 1.00 3.73 N
ATOM 21 C2 A A 272 5.872 83.015 104.352 1.00 5.33 C
ATOM 22 N3 A A 272 6.444 82.169 103.522 1.00 4.18 N
ATOM 23 C4 A A 272 5.586 81.812 102.556 1.00 4.42 C
ATOM 24 P C A 273 6.555 76.041 103.979 1.00 24.24 P
ATOM 25 OP1 C A 273 7.547 75.187 104.691 1.00 29.78 O
ATOM 26 OP2 C A 273 5.416 75.410 103.267 1.00 28.27 O
ATOM 27 O5' C A 273 5.944 77.083 105.017 1.00 19.72 O
TER
ATOM 1 O3' C B 232 -9.208 82.002 98.279 1.00 22.54 O
ATOM 2 P A B 233 -8.169 82.831 97.372 1.00 50.30 P
ATOM 3 OP1 A B 233 -8.819 84.099 96.968 1.00 28.35 O
ATOM 4 OP2 A B 233 -7.609 81.927 96.334 1.00 28.64 O
ATOM 5 O5' A B 233 -6.973 83.184 98.360 1.00 30.12 O
ATOM 6 C5' A B 233 -7.156 84.109 99.452 1.00 31.22 C
ATOM 7 C4' A B 233 -5.965 85.030 99.560 1.00 35.10 C
ATOM 8 O4' A B 233 -4.785 84.262 99.891 1.00 36.09 O
ATOM 9 C3' A B 233 -5.594 85.739 98.267 1.00 34.81 C
ATOM 10 O3' A B 233 -6.445 86.879 97.978 1.00 37.18 O
ATOM 11 C2' A B 233 -4.072 85.927 98.329 1.00 34.12 C
ATOM 12 O2' A B 233 -3.599 87.230 98.579 1.00 33.64 O
ATOM 13 C1' A B 233 -3.656 84.972 99.458 1.00 35.70 C
ATOM 14 N9 A B 233 -2.578 84.028 99.178 1.00 22.81 N
ATOM 15 C8 A B 233 -2.390 83.211 98.101 1.00 23.87 C
ATOM 16 N7 A B 233 -1.281 82.515 98.155 1.00 24.94 N
ATOM 17 C5 A B 233 -0.709 82.894 99.358 1.00 24.88 C
ATOM 18 C6 A B 233 0.479 82.517 100.004 1.00 24.31 C
ATOM 19 N6 A B 233 1.348 81.641 99.508 1.00 24.41 N
ATOM 20 N1 A B 233 0.751 83.078 101.196 1.00 25.19 N
ATOM 21 C2 A B 233 -0.115 83.954 101.696 1.00 25.44 C
ATOM 22 N3 A B 233 -1.261 84.390 101.186 1.00 25.48 N
ATOM 23 C4 A B 233 -1.502 83.815 100.000 1.00 24.61 C
ATOM 24 P U B 234 -6.465 88.204 98.924 1.00 62.66 P
ATOM 25 OP1 U B 234 -7.595 89.010 98.390 1.00 69.86 O
ATOM 26 OP2 U B 234 -5.137 88.844 99.084 1.00 72.59 O
ATOM 27 O5' U B 234 -6.946 87.706 100.357 1.00 25.03 O
TER
ATOM 2 P A A 272 3.285 77.702 99.485 1.00 20.21 P
ATOM 3 OP1 A A 272 3.354 76.456 98.660 1.00 15.58 O
ATOM 4 OP2 A A 272 2.033 78.018 100.231 1.00 15.46 O
ATOM 5 O5' A A 272 4.469 77.607 100.542 1.00 25.57 O
ATOM 6 C5' A A 272 5.746 77.069 100.161 1.00 24.19 C
ATOM 7 C4' A A 272 6.851 77.887 100.771 1.00 24.19 C
ATOM 8 O4' A A 272 6.778 79.243 100.253 1.00 25.66 O
ATOM 9 C3' A A 272 6.765 78.037 102.278 1.00 24.41 C
ATOM 10 O3' A A 272 7.396 76.943 102.944 1.00 25.90 O
ATOM 11 C2' A A 272 7.489 79.359 102.503 1.00 24.94 C
ATOM 12 O2' A A 272 8.897 79.201 102.457 1.00 25.50 O
ATOM 13 C1' A A 272 7.046 80.172 101.283 1.00 24.20 C
ATOM 14 N9 A A 272 5.815 80.935 101.526 1.00 5.81 N
ATOM 15 C8 A A 272 4.645 80.908 100.801 1.00 4.74 C
ATOM 16 N7 A A 272 3.695 81.669 101.291 1.00 3.30 N
ATOM 17 C5 A A 272 4.280 82.243 102.404 1.00 3.30 C
ATOM 18 C6 A A 272 3.795 83.134 103.352 1.00 3.30 C
ATOM 19 N6 A A 272 2.556 83.626 103.342 1.00 3.30 N
ATOM 20 N1 A A 272 4.628 83.512 104.335 1.00 3.73 N
ATOM 21 C2 A A 272 5.872 83.015 104.352 1.00 5.33 C
ATOM 22 N3 A A 272 6.444 82.169 103.522 1.00 4.18 N
ATOM 23 C4 A A 272 5.586 81.812 102.556 1.00 4.42 C
ATOM 24 P C A 273 6.555 76.041 103.979 1.00 24.24 P
ATOM 25 OP1 C A 273 7.547 75.187 104.691 1.00 29.78 O
ATOM 26 OP2 C A 273 5.416 75.410 103.267 1.00 28.27 O
ATOM 27 O5' C A 273 5.944 77.083 105.017 1.00 19.72 O
TER
ATOM 1 O3' C B 232 -9.208 82.002 98.279 1.00 22.54 O
ATOM 2 P A B 233 -8.169 82.831 97.372 1.00 50.30 P
ATOM 3 OP1 A B 233 -8.819 84.099 96.968 1.00 28.35 O
ATOM 4 OP2 A B 233 -7.609 81.927 96.334 1.00 28.64 O
ATOM 5 O5' A B 233 -6.973 83.184 98.360 1.00 30.12 O
ATOM 6 C5' A B 233 -7.156 84.109 99.452 1.00 31.22 C
ATOM 7 C4' A B 233 -5.965 85.030 99.560 1.00 35.10 C
ATOM 8 O4' A B 233 -4.785 84.262 99.891 1.00 36.09 O
ATOM 9 C3' A B 233 -5.594 85.739 98.267 1.00 34.81 C
ATOM 10 O3' A B 233 -6.445 86.879 97.978 1.00 37.18 O
ATOM 11 C2' A B 233 -4.072 85.927 98.329 1.00 34.12 C
ATOM 12 O2' A B 233 -3.599 87.230 98.579 1.00 33.64 O
ATOM 13 C1' A B 233 -3.656 84.972 99.458 1.00 35.70 C
ATOM 14 N9 A B 233 -2.578 84.028 99.178 1.00 22.81 N
ATOM 15 C8 A B 233 -2.390 83.211 98.101 1.00 23.87 C
ATOM 16 N7 A B 233 -1.281 82.515 98.155 1.00 24.94 N
ATOM 17 C5 A B 233 -0.709 82.894 99.358 1.00 24.88 C
ATOM 18 C6 A B 233 0.479 82.517 100.004 1.00 24.31 C
ATOM 19 N6 A B 233 1.348 81.641 99.508 1.00 24.41 N
ATOM 20 N1 A B 233 0.751 83.078 101.196 1.00 25.19 N
ATOM 21 C2 A B 233 -0.115 83.954 101.696 1.00 25.44 C
ATOM 22 N3 A B 233 -1.261 84.390 101.186 1.00 25.48 N
ATOM 23 C4 A B 233 -1.502 83.815 100.000 1.00 24.61 C
ATOM 24 P U B 234 -6.465 88.204 98.924 1.00 62.66 P
ATOM 25 OP1 U B 234 -7.595 89.010 98.390 1.00 69.86 O
ATOM 26 OP2 U B 234 -5.137 88.844 99.084 1.00 72.59 O
ATOM 27 O5' U B 234 -6.946 87.706 100.357 1.00 25.03 O
TER
Atoms:
OP1: (3.354,76.456,98.660)
OP2: (2.033,78.018,100.231)
C3': (6.765,78.037,102.278)
C1': (7.046,80.172,101.283)
C5': (5.746,77.069,100.161)
O4': (6.778,79.243,100.253)
C8: (4.645,80.908,100.801)
O2': (8.897,79.201,102.457)
C6: (3.795,83.134,103.352)
C5: (4.280,82.243,102.404)
C4: (5.586,81.812,102.556)
P: (3.285,77.702,99.485)
C4': (6.851,77.887,100.771)
C2': (7.489,79.359,102.503)
C2: (5.872,83.015,104.352)
N1: (4.628,83.512,104.335)
N3: (6.444,82.169,103.522)
N6: (2.556,83.626,103.342)
N7: (3.695,81.669,101.291)
N9: (5.815,80.935,101.526)
O5': (4.469,77.607,100.542)
O3': (7.396,76.943,102.944)
OP2: (2.033,78.018,100.231)
C3': (6.765,78.037,102.278)
C1': (7.046,80.172,101.283)
C5': (5.746,77.069,100.161)
O4': (6.778,79.243,100.253)
C8: (4.645,80.908,100.801)
O2': (8.897,79.201,102.457)
C6: (3.795,83.134,103.352)
C5: (4.280,82.243,102.404)
C4: (5.586,81.812,102.556)
P: (3.285,77.702,99.485)
C4': (6.851,77.887,100.771)
C2': (7.489,79.359,102.503)
C2: (5.872,83.015,104.352)
N1: (4.628,83.512,104.335)
N3: (6.444,82.169,103.522)
N6: (2.556,83.626,103.342)
N7: (3.695,81.669,101.291)
N9: (5.815,80.935,101.526)
O5': (4.469,77.607,100.542)
O3': (7.396,76.943,102.944)
OP1: (-8.819,84.099,96.968)
OP2: (-7.609,81.927,96.334)
C3': (-5.594,85.739,98.267)
C1': (-3.656,84.972,99.458)
C5': (-7.156,84.109,99.452)
O4': (-4.785,84.262,99.891)
C8: (-2.390,83.211,98.101)
O2': (-3.599,87.230,98.579)
C6: (0.479,82.517,100.004)
C5: (-0.709,82.894,99.358)
C4: (-1.502,83.815,100.000)
P: (-8.169,82.831,97.372)
C4': (-5.965,85.030,99.560)
C2': (-4.072,85.927,98.329)
C2: (-0.115,83.954,101.696)
N1: (0.751,83.078,101.196)
N3: (-1.261,84.390,101.186)
N6: (1.348,81.641,99.508)
N7: (-1.281,82.515,98.155)
N9: (-2.578,84.028,99.178)
O5': (-6.973,83.184,98.360)
O3': (-6.445,86.879,97.978)
OP2: (-7.609,81.927,96.334)
C3': (-5.594,85.739,98.267)
C1': (-3.656,84.972,99.458)
C5': (-7.156,84.109,99.452)
O4': (-4.785,84.262,99.891)
C8: (-2.390,83.211,98.101)
O2': (-3.599,87.230,98.579)
C6: (0.479,82.517,100.004)
C5: (-0.709,82.894,99.358)
C4: (-1.502,83.815,100.000)
P: (-8.169,82.831,97.372)
C4': (-5.965,85.030,99.560)
C2': (-4.072,85.927,98.329)
C2: (-0.115,83.954,101.696)
N1: (0.751,83.078,101.196)
N3: (-1.261,84.390,101.186)
N6: (1.348,81.641,99.508)
N7: (-1.281,82.515,98.155)
N9: (-2.578,84.028,99.178)
O5': (-6.973,83.184,98.360)
O3': (-6.445,86.879,97.978)
Image (generated by PyMOL):