Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:5472:5520
Extra
PDB:
ATOM 1 O3' A A 471 92.477 -11.691 306.862 1.00 59.35 O
ATOM 2 P A A 472 92.484 -10.848 308.225 1.00 46.68 P
ATOM 3 OP1 A A 472 92.629 -11.795 309.353 1.00 47.08 O
ATOM 4 OP2 A A 472 91.339 -9.960 308.209 1.00 46.93 O
ATOM 5 O5' A A 472 93.769 -10.016 308.071 1.00 46.21 O
ATOM 6 C5' A A 472 95.015 -10.632 307.927 1.00 45.87 C
ATOM 7 C4' A A 472 96.058 -9.577 307.849 1.00 45.49 C
ATOM 8 O4' A A 472 95.945 -8.897 306.576 1.00 45.07 O
ATOM 9 C3' A A 472 95.886 -8.459 308.854 1.00 45.76 C
ATOM 10 O3' A A 472 96.383 -8.776 310.118 1.00 46.06 O
ATOM 11 C2' A A 472 96.619 -7.353 308.199 1.00 45.29 C
ATOM 12 O2' A A 472 98.003 -7.636 308.231 1.00 44.96 O
ATOM 13 C1' A A 472 96.140 -7.529 306.768 1.00 44.98 C
ATOM 14 N9 A A 472 94.866 -6.835 306.542 1.00 45.21 N
ATOM 15 C8 A A 472 93.572 -7.213 306.761 1.00 45.65 C
ATOM 16 N7 A A 472 92.690 -6.301 306.433 1.00 45.74 N
ATOM 17 C5 A A 472 93.446 -5.256 306.000 1.00 45.33 C
ATOM 18 C6 A A 472 93.111 -4.004 305.513 1.00 45.21 C
ATOM 19 N6 A A 472 91.884 -3.554 305.398 1.00 45.50 N
ATOM 20 N1 A A 472 94.129 -3.203 305.118 1.00 44.77 N
ATOM 21 C2 A A 472 95.403 -3.655 305.248 1.00 44.49 C
ATOM 22 N3 A A 472 95.848 -4.825 305.686 1.00 44.56 N
ATOM 23 C4 A A 472 94.792 -5.573 306.048 1.00 45.00 C
ATOM 24 P A A 473 95.703 -8.122 311.388 1.00 51.81 P
ATOM 25 OP1 A A 473 96.421 -8.629 312.597 1.00 52.06 O
ATOM 26 OP2 A A 473 94.248 -8.359 311.241 1.00 52.17 O
ATOM 27 O5' A A 473 96.014 -6.568 311.177 1.00 51.56 O
TER
ATOM 1 O3' A B 519 80.837 -7.806 308.038 1.00 64.13 O
ATOM 2 P A B 520 81.200 -8.094 306.511 1.00 57.86 P
ATOM 3 OP1 A B 520 79.934 -8.256 305.778 1.00 58.07 O
ATOM 4 OP2 A B 520 82.188 -9.213 306.497 1.00 57.62 O
ATOM 5 O5' A B 520 81.890 -6.752 306.071 1.00 57.41 O
ATOM 6 C5' A B 520 81.167 -5.556 306.141 1.00 57.60 C
ATOM 7 C4' A B 520 82.066 -4.376 306.027 1.00 57.20 C
ATOM 8 O4' A B 520 83.092 -4.444 307.033 1.00 57.18 O
ATOM 9 C3' A B 520 82.832 -4.255 304.738 1.00 56.56 C
ATOM 10 O3' A B 520 82.027 -3.749 303.720 1.00 56.49 O
ATOM 11 C2' A B 520 83.941 -3.314 305.135 1.00 56.28 C
ATOM 12 O2' A B 520 83.431 -2.009 305.216 1.00 56.41 O
ATOM 13 C1' A B 520 84.248 -3.799 306.559 1.00 56.64 C
ATOM 14 N9 A B 520 85.369 -4.771 306.602 1.00 56.35 N
ATOM 15 C8 A B 520 85.324 -6.116 306.888 1.00 56.52 C
ATOM 16 N7 A B 520 86.485 -6.717 306.855 1.00 56.19 N
ATOM 17 C5 A B 520 87.351 -5.697 306.529 1.00 55.77 C
ATOM 18 C6 A B 520 88.731 -5.674 306.334 1.00 55.29 C
ATOM 19 N6 A B 520 89.544 -6.719 306.422 1.00 55.14 N
ATOM 20 N1 A B 520 89.255 -4.484 306.029 1.00 54.98 N
ATOM 21 C2 A B 520 88.473 -3.403 305.922 1.00 55.12 C
ATOM 22 N3 A B 520 87.163 -3.292 306.085 1.00 55.56 N
ATOM 23 C4 A B 520 86.678 -4.495 306.384 1.00 55.86 C
ATOM 24 P U B 521 82.383 -4.003 302.196 1.00 59.47 P
ATOM 25 OP1 U B 521 81.448 -3.161 301.399 1.00 59.51 O
ATOM 26 OP2 U B 521 82.387 -5.462 301.973 1.00 59.48 O
ATOM 27 O5' U B 521 83.862 -3.431 302.088 1.00 58.93 O
TER
ATOM 2 P A A 472 92.484 -10.848 308.225 1.00 46.68 P
ATOM 3 OP1 A A 472 92.629 -11.795 309.353 1.00 47.08 O
ATOM 4 OP2 A A 472 91.339 -9.960 308.209 1.00 46.93 O
ATOM 5 O5' A A 472 93.769 -10.016 308.071 1.00 46.21 O
ATOM 6 C5' A A 472 95.015 -10.632 307.927 1.00 45.87 C
ATOM 7 C4' A A 472 96.058 -9.577 307.849 1.00 45.49 C
ATOM 8 O4' A A 472 95.945 -8.897 306.576 1.00 45.07 O
ATOM 9 C3' A A 472 95.886 -8.459 308.854 1.00 45.76 C
ATOM 10 O3' A A 472 96.383 -8.776 310.118 1.00 46.06 O
ATOM 11 C2' A A 472 96.619 -7.353 308.199 1.00 45.29 C
ATOM 12 O2' A A 472 98.003 -7.636 308.231 1.00 44.96 O
ATOM 13 C1' A A 472 96.140 -7.529 306.768 1.00 44.98 C
ATOM 14 N9 A A 472 94.866 -6.835 306.542 1.00 45.21 N
ATOM 15 C8 A A 472 93.572 -7.213 306.761 1.00 45.65 C
ATOM 16 N7 A A 472 92.690 -6.301 306.433 1.00 45.74 N
ATOM 17 C5 A A 472 93.446 -5.256 306.000 1.00 45.33 C
ATOM 18 C6 A A 472 93.111 -4.004 305.513 1.00 45.21 C
ATOM 19 N6 A A 472 91.884 -3.554 305.398 1.00 45.50 N
ATOM 20 N1 A A 472 94.129 -3.203 305.118 1.00 44.77 N
ATOM 21 C2 A A 472 95.403 -3.655 305.248 1.00 44.49 C
ATOM 22 N3 A A 472 95.848 -4.825 305.686 1.00 44.56 N
ATOM 23 C4 A A 472 94.792 -5.573 306.048 1.00 45.00 C
ATOM 24 P A A 473 95.703 -8.122 311.388 1.00 51.81 P
ATOM 25 OP1 A A 473 96.421 -8.629 312.597 1.00 52.06 O
ATOM 26 OP2 A A 473 94.248 -8.359 311.241 1.00 52.17 O
ATOM 27 O5' A A 473 96.014 -6.568 311.177 1.00 51.56 O
TER
ATOM 1 O3' A B 519 80.837 -7.806 308.038 1.00 64.13 O
ATOM 2 P A B 520 81.200 -8.094 306.511 1.00 57.86 P
ATOM 3 OP1 A B 520 79.934 -8.256 305.778 1.00 58.07 O
ATOM 4 OP2 A B 520 82.188 -9.213 306.497 1.00 57.62 O
ATOM 5 O5' A B 520 81.890 -6.752 306.071 1.00 57.41 O
ATOM 6 C5' A B 520 81.167 -5.556 306.141 1.00 57.60 C
ATOM 7 C4' A B 520 82.066 -4.376 306.027 1.00 57.20 C
ATOM 8 O4' A B 520 83.092 -4.444 307.033 1.00 57.18 O
ATOM 9 C3' A B 520 82.832 -4.255 304.738 1.00 56.56 C
ATOM 10 O3' A B 520 82.027 -3.749 303.720 1.00 56.49 O
ATOM 11 C2' A B 520 83.941 -3.314 305.135 1.00 56.28 C
ATOM 12 O2' A B 520 83.431 -2.009 305.216 1.00 56.41 O
ATOM 13 C1' A B 520 84.248 -3.799 306.559 1.00 56.64 C
ATOM 14 N9 A B 520 85.369 -4.771 306.602 1.00 56.35 N
ATOM 15 C8 A B 520 85.324 -6.116 306.888 1.00 56.52 C
ATOM 16 N7 A B 520 86.485 -6.717 306.855 1.00 56.19 N
ATOM 17 C5 A B 520 87.351 -5.697 306.529 1.00 55.77 C
ATOM 18 C6 A B 520 88.731 -5.674 306.334 1.00 55.29 C
ATOM 19 N6 A B 520 89.544 -6.719 306.422 1.00 55.14 N
ATOM 20 N1 A B 520 89.255 -4.484 306.029 1.00 54.98 N
ATOM 21 C2 A B 520 88.473 -3.403 305.922 1.00 55.12 C
ATOM 22 N3 A B 520 87.163 -3.292 306.085 1.00 55.56 N
ATOM 23 C4 A B 520 86.678 -4.495 306.384 1.00 55.86 C
ATOM 24 P U B 521 82.383 -4.003 302.196 1.00 59.47 P
ATOM 25 OP1 U B 521 81.448 -3.161 301.399 1.00 59.51 O
ATOM 26 OP2 U B 521 82.387 -5.462 301.973 1.00 59.48 O
ATOM 27 O5' U B 521 83.862 -3.431 302.088 1.00 58.93 O
TER
Atoms:
OP1: (92.629,-11.795,309.353)
OP2: (91.339,-9.960,308.209)
C3': (95.886,-8.459,308.854)
C1': (96.140,-7.529,306.768)
C5': (95.015,-10.632,307.927)
O4': (95.945,-8.897,306.576)
C8: (93.572,-7.213,306.761)
O2': (98.003,-7.636,308.231)
C6: (93.111,-4.004,305.513)
C5: (93.446,-5.256,306.000)
C4: (94.792,-5.573,306.048)
P: (92.484,-10.848,308.225)
C4': (96.058,-9.577,307.849)
C2': (96.619,-7.353,308.199)
C2: (95.403,-3.655,305.248)
N1: (94.129,-3.203,305.118)
N3: (95.848,-4.825,305.686)
N6: (91.884,-3.554,305.398)
N7: (92.690,-6.301,306.433)
N9: (94.866,-6.835,306.542)
O5': (93.769,-10.016,308.071)
O3': (96.383,-8.776,310.118)
OP2: (91.339,-9.960,308.209)
C3': (95.886,-8.459,308.854)
C1': (96.140,-7.529,306.768)
C5': (95.015,-10.632,307.927)
O4': (95.945,-8.897,306.576)
C8: (93.572,-7.213,306.761)
O2': (98.003,-7.636,308.231)
C6: (93.111,-4.004,305.513)
C5: (93.446,-5.256,306.000)
C4: (94.792,-5.573,306.048)
P: (92.484,-10.848,308.225)
C4': (96.058,-9.577,307.849)
C2': (96.619,-7.353,308.199)
C2: (95.403,-3.655,305.248)
N1: (94.129,-3.203,305.118)
N3: (95.848,-4.825,305.686)
N6: (91.884,-3.554,305.398)
N7: (92.690,-6.301,306.433)
N9: (94.866,-6.835,306.542)
O5': (93.769,-10.016,308.071)
O3': (96.383,-8.776,310.118)
OP1: (79.934,-8.256,305.778)
OP2: (82.188,-9.213,306.497)
C3': (82.832,-4.255,304.738)
C1': (84.248,-3.799,306.559)
C5': (81.167,-5.556,306.141)
O4': (83.092,-4.444,307.033)
C8: (85.324,-6.116,306.888)
O2': (83.431,-2.009,305.216)
C6: (88.731,-5.674,306.334)
C5: (87.351,-5.697,306.529)
C4: (86.678,-4.495,306.384)
P: (81.200,-8.094,306.511)
C4': (82.066,-4.376,306.027)
C2': (83.941,-3.314,305.135)
C2: (88.473,-3.403,305.922)
N1: (89.255,-4.484,306.029)
N3: (87.163,-3.292,306.085)
N6: (89.544,-6.719,306.422)
N7: (86.485,-6.717,306.855)
N9: (85.369,-4.771,306.602)
O5': (81.890,-6.752,306.071)
O3': (82.027,-3.749,303.720)
OP2: (82.188,-9.213,306.497)
C3': (82.832,-4.255,304.738)
C1': (84.248,-3.799,306.559)
C5': (81.167,-5.556,306.141)
O4': (83.092,-4.444,307.033)
C8: (85.324,-6.116,306.888)
O2': (83.431,-2.009,305.216)
C6: (88.731,-5.674,306.334)
C5: (87.351,-5.697,306.529)
C4: (86.678,-4.495,306.384)
P: (81.200,-8.094,306.511)
C4': (82.066,-4.376,306.027)
C2': (83.941,-3.314,305.135)
C2: (88.473,-3.403,305.922)
N1: (89.255,-4.484,306.029)
N3: (87.163,-3.292,306.085)
N6: (89.544,-6.719,306.422)
N7: (86.485,-6.717,306.855)
N9: (85.369,-4.771,306.602)
O5': (81.890,-6.752,306.071)
O3': (82.027,-3.749,303.720)
Image (generated by PyMOL):