Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01190:02393
Extra
PDB:
ATOM 1 O3' A A1189 51.887 108.245 135.278 1.00 38.66 O
ATOM 2 P A A1190 52.330 109.760 135.576 1.00 40.96 P
ATOM 3 OP1 A A1190 52.768 109.877 136.984 1.00 41.06 O
ATOM 4 OP2 A A1190 51.252 110.648 135.076 1.00 40.64 O
ATOM 5 O5' A A1190 53.635 109.948 134.678 1.00 40.74 O
ATOM 6 C5' A A1190 53.542 110.229 133.265 1.00 39.11 C
ATOM 7 C4' A A1190 54.547 111.288 132.885 1.00 38.10 C
ATOM 8 O4' A A1190 55.881 110.742 132.999 1.00 39.33 O
ATOM 9 C3' A A1190 54.526 111.757 131.445 1.00 37.73 C
ATOM 10 O3' A A1190 53.478 112.693 131.242 1.00 37.74 O
ATOM 11 C2' A A1190 55.896 112.414 131.314 1.00 38.19 C
ATOM 12 O2' A A1190 55.934 113.703 131.890 1.00 37.77 O
ATOM 13 C1' A A1190 56.757 111.489 132.177 1.00 39.22 C
ATOM 14 N9 A A1190 57.608 110.560 131.438 1.00 40.45 N
ATOM 15 C8 A A1190 57.329 109.869 130.286 1.00 41.72 C
ATOM 16 N7 A A1190 58.317 109.115 129.870 1.00 42.13 N
ATOM 17 C5 A A1190 59.313 109.323 130.812 1.00 42.80 C
ATOM 18 C6 A A1190 60.617 108.813 130.941 1.00 43.23 C
ATOM 19 N6 A A1190 61.164 107.946 130.088 1.00 42.14 N
ATOM 20 N1 A A1190 61.351 109.228 131.997 1.00 44.54 N
ATOM 21 C2 A A1190 60.802 110.089 132.860 1.00 43.26 C
ATOM 22 N3 A A1190 59.588 110.635 132.848 1.00 43.03 N
ATOM 23 C4 A A1190 58.887 110.208 131.785 1.00 42.02 C
ATOM 24 P A A1191 52.715 112.747 129.828 1.00 37.99 P
ATOM 25 OP1 A A1191 51.415 113.423 130.072 1.00 37.80 O
ATOM 26 OP2 A A1191 52.739 111.389 129.226 1.00 37.48 O
ATOM 27 O5' A A1191 53.617 113.702 128.934 1.00 34.70 O
TER
ATOM 1 O3' C B2392 54.397 118.916 130.002 1.00 33.79 O
ATOM 2 P C B2393 54.264 118.810 131.601 1.00 35.81 P
ATOM 3 OP1 C B2393 53.258 117.750 131.911 1.00 34.17 O
ATOM 4 OP2 C B2393 54.088 120.171 132.166 1.00 34.49 O
ATOM 5 O5' C B2393 55.693 118.289 132.055 1.00 31.51 O
ATOM 6 C5' C B2393 56.178 117.033 131.594 1.00 30.06 C
ATOM 7 C4' C B2393 57.485 116.715 132.256 1.00 31.95 C
ATOM 8 O4' C B2393 58.503 117.631 131.760 1.00 30.76 O
ATOM 9 C3' C B2393 57.486 116.836 133.776 1.00 32.91 C
ATOM 10 O3' C B2393 58.299 115.816 134.330 1.00 37.01 O
ATOM 11 C2' C B2393 58.121 118.207 134.000 1.00 32.63 C
ATOM 12 O2' C B2393 58.798 118.347 135.235 1.00 32.86 O
ATOM 13 C1' C B2393 59.119 118.277 132.847 1.00 30.38 C
ATOM 14 N1 C B2393 59.468 119.656 132.464 1.00 28.95 N
ATOM 15 C2 C B2393 60.823 119.979 132.278 1.00 31.90 C
ATOM 16 O2 C B2393 61.673 119.067 132.292 1.00 33.31 O
ATOM 17 N3 C B2393 61.173 121.274 132.079 1.00 31.24 N
ATOM 18 C4 C B2393 60.230 122.220 132.040 1.00 31.83 C
ATOM 19 N4 C B2393 60.627 123.493 131.927 1.00 30.00 N
ATOM 20 C5 C B2393 58.838 121.905 132.137 1.00 29.55 C
ATOM 21 C6 C B2393 58.508 120.623 132.342 1.00 28.28 C
ATOM 22 P A B2394 57.655 114.737 135.329 1.00 39.70 P
ATOM 23 OP1 A B2394 56.687 113.902 134.570 1.00 40.13 O
ATOM 24 OP2 A B2394 57.195 115.437 136.547 1.00 41.67 O
ATOM 25 O5' A B2394 58.916 113.843 135.719 1.00 39.52 O
TER
ATOM 2 P A A1190 52.330 109.760 135.576 1.00 40.96 P
ATOM 3 OP1 A A1190 52.768 109.877 136.984 1.00 41.06 O
ATOM 4 OP2 A A1190 51.252 110.648 135.076 1.00 40.64 O
ATOM 5 O5' A A1190 53.635 109.948 134.678 1.00 40.74 O
ATOM 6 C5' A A1190 53.542 110.229 133.265 1.00 39.11 C
ATOM 7 C4' A A1190 54.547 111.288 132.885 1.00 38.10 C
ATOM 8 O4' A A1190 55.881 110.742 132.999 1.00 39.33 O
ATOM 9 C3' A A1190 54.526 111.757 131.445 1.00 37.73 C
ATOM 10 O3' A A1190 53.478 112.693 131.242 1.00 37.74 O
ATOM 11 C2' A A1190 55.896 112.414 131.314 1.00 38.19 C
ATOM 12 O2' A A1190 55.934 113.703 131.890 1.00 37.77 O
ATOM 13 C1' A A1190 56.757 111.489 132.177 1.00 39.22 C
ATOM 14 N9 A A1190 57.608 110.560 131.438 1.00 40.45 N
ATOM 15 C8 A A1190 57.329 109.869 130.286 1.00 41.72 C
ATOM 16 N7 A A1190 58.317 109.115 129.870 1.00 42.13 N
ATOM 17 C5 A A1190 59.313 109.323 130.812 1.00 42.80 C
ATOM 18 C6 A A1190 60.617 108.813 130.941 1.00 43.23 C
ATOM 19 N6 A A1190 61.164 107.946 130.088 1.00 42.14 N
ATOM 20 N1 A A1190 61.351 109.228 131.997 1.00 44.54 N
ATOM 21 C2 A A1190 60.802 110.089 132.860 1.00 43.26 C
ATOM 22 N3 A A1190 59.588 110.635 132.848 1.00 43.03 N
ATOM 23 C4 A A1190 58.887 110.208 131.785 1.00 42.02 C
ATOM 24 P A A1191 52.715 112.747 129.828 1.00 37.99 P
ATOM 25 OP1 A A1191 51.415 113.423 130.072 1.00 37.80 O
ATOM 26 OP2 A A1191 52.739 111.389 129.226 1.00 37.48 O
ATOM 27 O5' A A1191 53.617 113.702 128.934 1.00 34.70 O
TER
ATOM 1 O3' C B2392 54.397 118.916 130.002 1.00 33.79 O
ATOM 2 P C B2393 54.264 118.810 131.601 1.00 35.81 P
ATOM 3 OP1 C B2393 53.258 117.750 131.911 1.00 34.17 O
ATOM 4 OP2 C B2393 54.088 120.171 132.166 1.00 34.49 O
ATOM 5 O5' C B2393 55.693 118.289 132.055 1.00 31.51 O
ATOM 6 C5' C B2393 56.178 117.033 131.594 1.00 30.06 C
ATOM 7 C4' C B2393 57.485 116.715 132.256 1.00 31.95 C
ATOM 8 O4' C B2393 58.503 117.631 131.760 1.00 30.76 O
ATOM 9 C3' C B2393 57.486 116.836 133.776 1.00 32.91 C
ATOM 10 O3' C B2393 58.299 115.816 134.330 1.00 37.01 O
ATOM 11 C2' C B2393 58.121 118.207 134.000 1.00 32.63 C
ATOM 12 O2' C B2393 58.798 118.347 135.235 1.00 32.86 O
ATOM 13 C1' C B2393 59.119 118.277 132.847 1.00 30.38 C
ATOM 14 N1 C B2393 59.468 119.656 132.464 1.00 28.95 N
ATOM 15 C2 C B2393 60.823 119.979 132.278 1.00 31.90 C
ATOM 16 O2 C B2393 61.673 119.067 132.292 1.00 33.31 O
ATOM 17 N3 C B2393 61.173 121.274 132.079 1.00 31.24 N
ATOM 18 C4 C B2393 60.230 122.220 132.040 1.00 31.83 C
ATOM 19 N4 C B2393 60.627 123.493 131.927 1.00 30.00 N
ATOM 20 C5 C B2393 58.838 121.905 132.137 1.00 29.55 C
ATOM 21 C6 C B2393 58.508 120.623 132.342 1.00 28.28 C
ATOM 22 P A B2394 57.655 114.737 135.329 1.00 39.70 P
ATOM 23 OP1 A B2394 56.687 113.902 134.570 1.00 40.13 O
ATOM 24 OP2 A B2394 57.195 115.437 136.547 1.00 41.67 O
ATOM 25 O5' A B2394 58.916 113.843 135.719 1.00 39.52 O
TER
Atoms:
OP1: (52.768,109.877,136.984)
OP2: (51.252,110.648,135.076)
C3': (54.526,111.757,131.445)
C1': (56.757,111.489,132.177)
C5': (53.542,110.229,133.265)
O4': (55.881,110.742,132.999)
C8: (57.329,109.869,130.286)
O2': (55.934,113.703,131.890)
C6: (60.617,108.813,130.941)
C5: (59.313,109.323,130.812)
C4: (58.887,110.208,131.785)
P: (52.330,109.760,135.576)
C4': (54.547,111.288,132.885)
C2': (55.896,112.414,131.314)
C2: (60.802,110.089,132.860)
N1: (61.351,109.228,131.997)
N3: (59.588,110.635,132.848)
N6: (61.164,107.946,130.088)
N7: (58.317,109.115,129.870)
N9: (57.608,110.560,131.438)
O5': (53.635,109.948,134.678)
O3': (53.478,112.693,131.242)
OP2: (51.252,110.648,135.076)
C3': (54.526,111.757,131.445)
C1': (56.757,111.489,132.177)
C5': (53.542,110.229,133.265)
O4': (55.881,110.742,132.999)
C8: (57.329,109.869,130.286)
O2': (55.934,113.703,131.890)
C6: (60.617,108.813,130.941)
C5: (59.313,109.323,130.812)
C4: (58.887,110.208,131.785)
P: (52.330,109.760,135.576)
C4': (54.547,111.288,132.885)
C2': (55.896,112.414,131.314)
C2: (60.802,110.089,132.860)
N1: (61.351,109.228,131.997)
N3: (59.588,110.635,132.848)
N6: (61.164,107.946,130.088)
N7: (58.317,109.115,129.870)
N9: (57.608,110.560,131.438)
O5': (53.635,109.948,134.678)
O3': (53.478,112.693,131.242)
C2: (60.823,119.979,132.278)
OP1: (53.258,117.750,131.911)
OP2: (54.088,120.171,132.166)
C4: (60.230,122.220,132.040)
O5': (55.693,118.289,132.055)
C3': (57.486,116.836,133.776)
C1': (59.119,118.277,132.847)
O4': (58.503,117.631,131.760)
C5': (56.178,117.033,131.594)
P: (54.264,118.810,131.601)
O2: (61.673,119.067,132.292)
C4': (57.485,116.715,132.256)
C2': (58.121,118.207,134.000)
O2': (58.798,118.347,135.235)
N1: (59.468,119.656,132.464)
N3: (61.173,121.274,132.079)
N4: (60.627,123.493,131.927)
C6: (58.508,120.623,132.342)
C5: (58.838,121.905,132.137)
O3': (58.299,115.816,134.330)
OP1: (53.258,117.750,131.911)
OP2: (54.088,120.171,132.166)
C4: (60.230,122.220,132.040)
O5': (55.693,118.289,132.055)
C3': (57.486,116.836,133.776)
C1': (59.119,118.277,132.847)
O4': (58.503,117.631,131.760)
C5': (56.178,117.033,131.594)
P: (54.264,118.810,131.601)
O2: (61.673,119.067,132.292)
C4': (57.485,116.715,132.256)
C2': (58.121,118.207,134.000)
O2': (58.798,118.347,135.235)
N1: (59.468,119.656,132.464)
N3: (61.173,121.274,132.079)
N4: (60.627,123.493,131.927)
C6: (58.508,120.623,132.342)
C5: (58.838,121.905,132.137)
O3': (58.299,115.816,134.330)
Image (generated by PyMOL):