Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3IVN:B7:B33
Extra
PDB:
ATOM 1 O3' U A 6 -40.072 3.443 26.046 1.00 20.02 O
ATOM 2 P A A 7 -39.415 2.293 25.145 1.00 22.31 P
ATOM 3 OP1 A A 7 -40.528 1.589 24.462 1.00 22.54 O
ATOM 4 OP2 A A 7 -38.506 1.522 26.032 1.00 21.01 O
ATOM 5 O5' A A 7 -38.580 3.154 24.099 1.00 22.51 O
ATOM 6 C5' A A 7 -39.266 3.901 23.101 1.00 22.80 C
ATOM 7 C4' A A 7 -38.295 4.573 22.166 1.00 24.64 C
ATOM 8 O4' A A 7 -37.504 5.579 22.854 1.00 24.26 O
ATOM 9 C3' A A 7 -37.283 3.660 21.499 1.00 25.03 C
ATOM 10 O3' A A 7 -37.859 2.990 20.390 1.00 25.93 O
ATOM 11 C2' A A 7 -36.179 4.636 21.107 1.00 25.47 C
ATOM 12 O2' A A 7 -36.528 5.280 19.894 1.00 26.48 O
ATOM 13 C1' A A 7 -36.227 5.659 22.254 1.00 24.00 C
ATOM 14 N9 A A 7 -35.163 5.497 23.268 1.00 22.76 N
ATOM 15 C8 A A 7 -35.120 4.672 24.363 1.00 22.36 C
ATOM 16 N7 A A 7 -34.013 4.787 25.061 1.00 21.61 N
ATOM 17 C5 A A 7 -33.285 5.754 24.382 1.00 21.75 C
ATOM 18 C6 A A 7 -32.022 6.333 24.606 1.00 21.85 C
ATOM 19 N6 A A 7 -31.224 6.014 25.626 1.00 21.34 N
ATOM 20 N1 A A 7 -31.595 7.270 23.733 1.00 22.48 N
ATOM 21 C2 A A 7 -32.387 7.600 22.707 1.00 23.00 C
ATOM 22 N3 A A 7 -33.590 7.128 22.392 1.00 23.24 N
ATOM 23 C4 A A 7 -33.985 6.199 23.278 1.00 22.58 C
ATOM 24 P U A 8 -37.843 1.387 20.317 1.00 26.75 P
ATOM 25 OP1 U A 8 -38.516 0.968 19.055 1.00 27.76 O
ATOM 26 OP2 U A 8 -38.397 0.908 21.619 1.00 25.36 O
ATOM 27 O5' U A 8 -36.282 1.127 20.217 1.00 26.73 O
TER
ATOM 1 O3' G B 32 -38.676 2.017 14.901 1.00 32.37 O
ATOM 2 P U B 33 -39.778 3.179 15.017 1.00 31.42 P
ATOM 3 OP1 U B 33 -40.732 2.726 16.059 1.00 30.88 O
ATOM 4 OP2 U B 33 -40.272 3.440 13.645 1.00 33.00 O
ATOM 5 O5' U B 33 -38.932 4.426 15.530 1.00 32.29 O
ATOM 6 C5' U B 33 -38.277 4.416 16.799 1.00 30.89 C
ATOM 7 C4' U B 33 -37.427 5.653 16.969 1.00 30.05 C
ATOM 8 O4' U B 33 -36.512 5.715 15.844 1.00 30.71 O
ATOM 9 C3' U B 33 -38.168 6.990 16.981 1.00 30.56 C
ATOM 10 O3' U B 33 -37.455 7.907 17.798 1.00 30.05 O
ATOM 11 C2' U B 33 -38.052 7.460 15.535 1.00 31.74 C
ATOM 12 O2' U B 33 -38.149 8.854 15.366 1.00 32.10 O
ATOM 13 C1' U B 33 -36.668 6.953 15.178 1.00 31.75 C
ATOM 14 N1 U B 33 -36.487 6.716 13.753 1.00 32.62 N
ATOM 15 C2 U B 33 -35.346 7.215 13.158 1.00 33.64 C
ATOM 16 O2 U B 33 -34.495 7.833 13.776 1.00 33.85 O
ATOM 17 N3 U B 33 -35.237 6.960 11.815 1.00 33.86 N
ATOM 18 C4 U B 33 -36.141 6.274 11.031 1.00 35.09 C
ATOM 19 O4 U B 33 -35.907 6.123 9.832 1.00 37.02 O
ATOM 20 C5 U B 33 -37.296 5.793 11.726 1.00 34.41 C
ATOM 21 C6 U B 33 -37.427 6.025 13.032 1.00 33.29 C
ATOM 22 P G B 34 -37.762 8.056 19.367 1.00 30.66 P
ATOM 23 OP1 G B 34 -38.373 6.781 19.825 1.00 27.87 O
ATOM 24 OP2 G B 34 -38.540 9.314 19.513 1.00 29.62 O
ATOM 25 O5' G B 34 -36.294 8.256 19.961 1.00 28.53 O
TER
ATOM 2 P A A 7 -39.415 2.293 25.145 1.00 22.31 P
ATOM 3 OP1 A A 7 -40.528 1.589 24.462 1.00 22.54 O
ATOM 4 OP2 A A 7 -38.506 1.522 26.032 1.00 21.01 O
ATOM 5 O5' A A 7 -38.580 3.154 24.099 1.00 22.51 O
ATOM 6 C5' A A 7 -39.266 3.901 23.101 1.00 22.80 C
ATOM 7 C4' A A 7 -38.295 4.573 22.166 1.00 24.64 C
ATOM 8 O4' A A 7 -37.504 5.579 22.854 1.00 24.26 O
ATOM 9 C3' A A 7 -37.283 3.660 21.499 1.00 25.03 C
ATOM 10 O3' A A 7 -37.859 2.990 20.390 1.00 25.93 O
ATOM 11 C2' A A 7 -36.179 4.636 21.107 1.00 25.47 C
ATOM 12 O2' A A 7 -36.528 5.280 19.894 1.00 26.48 O
ATOM 13 C1' A A 7 -36.227 5.659 22.254 1.00 24.00 C
ATOM 14 N9 A A 7 -35.163 5.497 23.268 1.00 22.76 N
ATOM 15 C8 A A 7 -35.120 4.672 24.363 1.00 22.36 C
ATOM 16 N7 A A 7 -34.013 4.787 25.061 1.00 21.61 N
ATOM 17 C5 A A 7 -33.285 5.754 24.382 1.00 21.75 C
ATOM 18 C6 A A 7 -32.022 6.333 24.606 1.00 21.85 C
ATOM 19 N6 A A 7 -31.224 6.014 25.626 1.00 21.34 N
ATOM 20 N1 A A 7 -31.595 7.270 23.733 1.00 22.48 N
ATOM 21 C2 A A 7 -32.387 7.600 22.707 1.00 23.00 C
ATOM 22 N3 A A 7 -33.590 7.128 22.392 1.00 23.24 N
ATOM 23 C4 A A 7 -33.985 6.199 23.278 1.00 22.58 C
ATOM 24 P U A 8 -37.843 1.387 20.317 1.00 26.75 P
ATOM 25 OP1 U A 8 -38.516 0.968 19.055 1.00 27.76 O
ATOM 26 OP2 U A 8 -38.397 0.908 21.619 1.00 25.36 O
ATOM 27 O5' U A 8 -36.282 1.127 20.217 1.00 26.73 O
TER
ATOM 1 O3' G B 32 -38.676 2.017 14.901 1.00 32.37 O
ATOM 2 P U B 33 -39.778 3.179 15.017 1.00 31.42 P
ATOM 3 OP1 U B 33 -40.732 2.726 16.059 1.00 30.88 O
ATOM 4 OP2 U B 33 -40.272 3.440 13.645 1.00 33.00 O
ATOM 5 O5' U B 33 -38.932 4.426 15.530 1.00 32.29 O
ATOM 6 C5' U B 33 -38.277 4.416 16.799 1.00 30.89 C
ATOM 7 C4' U B 33 -37.427 5.653 16.969 1.00 30.05 C
ATOM 8 O4' U B 33 -36.512 5.715 15.844 1.00 30.71 O
ATOM 9 C3' U B 33 -38.168 6.990 16.981 1.00 30.56 C
ATOM 10 O3' U B 33 -37.455 7.907 17.798 1.00 30.05 O
ATOM 11 C2' U B 33 -38.052 7.460 15.535 1.00 31.74 C
ATOM 12 O2' U B 33 -38.149 8.854 15.366 1.00 32.10 O
ATOM 13 C1' U B 33 -36.668 6.953 15.178 1.00 31.75 C
ATOM 14 N1 U B 33 -36.487 6.716 13.753 1.00 32.62 N
ATOM 15 C2 U B 33 -35.346 7.215 13.158 1.00 33.64 C
ATOM 16 O2 U B 33 -34.495 7.833 13.776 1.00 33.85 O
ATOM 17 N3 U B 33 -35.237 6.960 11.815 1.00 33.86 N
ATOM 18 C4 U B 33 -36.141 6.274 11.031 1.00 35.09 C
ATOM 19 O4 U B 33 -35.907 6.123 9.832 1.00 37.02 O
ATOM 20 C5 U B 33 -37.296 5.793 11.726 1.00 34.41 C
ATOM 21 C6 U B 33 -37.427 6.025 13.032 1.00 33.29 C
ATOM 22 P G B 34 -37.762 8.056 19.367 1.00 30.66 P
ATOM 23 OP1 G B 34 -38.373 6.781 19.825 1.00 27.87 O
ATOM 24 OP2 G B 34 -38.540 9.314 19.513 1.00 29.62 O
ATOM 25 O5' G B 34 -36.294 8.256 19.961 1.00 28.53 O
TER
Atoms:
OP1: (-40.528,1.589,24.462)
OP2: (-38.506,1.522,26.032)
C3': (-37.283,3.660,21.499)
C1': (-36.227,5.659,22.254)
C5': (-39.266,3.901,23.101)
O4': (-37.504,5.579,22.854)
C8: (-35.120,4.672,24.363)
O2': (-36.528,5.280,19.894)
C6: (-32.022,6.333,24.606)
C5: (-33.285,5.754,24.382)
C4: (-33.985,6.199,23.278)
P: (-39.415,2.293,25.145)
C4': (-38.295,4.573,22.166)
C2': (-36.179,4.636,21.107)
C2: (-32.387,7.600,22.707)
N1: (-31.595,7.270,23.733)
N3: (-33.590,7.128,22.392)
N6: (-31.224,6.014,25.626)
N7: (-34.013,4.787,25.061)
N9: (-35.163,5.497,23.268)
O5': (-38.580,3.154,24.099)
O3': (-37.859,2.990,20.390)
OP2: (-38.506,1.522,26.032)
C3': (-37.283,3.660,21.499)
C1': (-36.227,5.659,22.254)
C5': (-39.266,3.901,23.101)
O4': (-37.504,5.579,22.854)
C8: (-35.120,4.672,24.363)
O2': (-36.528,5.280,19.894)
C6: (-32.022,6.333,24.606)
C5: (-33.285,5.754,24.382)
C4: (-33.985,6.199,23.278)
P: (-39.415,2.293,25.145)
C4': (-38.295,4.573,22.166)
C2': (-36.179,4.636,21.107)
C2: (-32.387,7.600,22.707)
N1: (-31.595,7.270,23.733)
N3: (-33.590,7.128,22.392)
N6: (-31.224,6.014,25.626)
N7: (-34.013,4.787,25.061)
N9: (-35.163,5.497,23.268)
O5': (-38.580,3.154,24.099)
O3': (-37.859,2.990,20.390)
C4: (-36.141,6.274,11.031)
N3: (-35.237,6.960,11.815)
OP1: (-40.732,2.726,16.059)
OP2: (-40.272,3.440,13.645)
C2: (-35.346,7.215,13.158)
C1': (-36.668,6.953,15.178)
C3': (-38.168,6.990,16.981)
O5': (-38.932,4.426,15.530)
O4': (-36.512,5.715,15.844)
C5': (-38.277,4.416,16.799)
P: (-39.778,3.179,15.017)
C4': (-37.427,5.653,16.969)
C2': (-38.052,7.460,15.535)
O2': (-38.149,8.854,15.366)
N1: (-36.487,6.716,13.753)
O4: (-35.907,6.123,9.832)
O2: (-34.495,7.833,13.776)
C6: (-37.427,6.025,13.032)
C5: (-37.296,5.793,11.726)
O3': (-37.455,7.907,17.798)
N3: (-35.237,6.960,11.815)
OP1: (-40.732,2.726,16.059)
OP2: (-40.272,3.440,13.645)
C2: (-35.346,7.215,13.158)
C1': (-36.668,6.953,15.178)
C3': (-38.168,6.990,16.981)
O5': (-38.932,4.426,15.530)
O4': (-36.512,5.715,15.844)
C5': (-38.277,4.416,16.799)
P: (-39.778,3.179,15.017)
C4': (-37.427,5.653,16.969)
C2': (-38.052,7.460,15.535)
O2': (-38.149,8.854,15.366)
N1: (-36.487,6.716,13.753)
O4: (-35.907,6.123,9.832)
O2: (-34.495,7.833,13.776)
C6: (-37.427,6.025,13.032)
C5: (-37.296,5.793,11.726)
O3': (-37.455,7.907,17.798)
Image (generated by PyMOL):