Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1120:A2509
Extra
PDB:
ATOM 1 O3' A A1119 -76.717 98.489 172.970 1.00 6.47 O
ATOM 2 P A A1120 -75.337 97.648 172.854 1.00 0.14 P
ATOM 3 OP1 A A1120 -75.702 96.272 172.424 1.00 0.14 O
ATOM 4 OP2 A A1120 -74.590 97.827 174.135 1.00 0.14 O
ATOM 5 O5' A A1120 -74.565 98.400 171.675 1.00 0.14 O
ATOM 6 C5' A A1120 -73.528 99.328 171.963 1.00 0.14 C
ATOM 7 C4' A A1120 -72.196 98.830 171.482 1.00 0.14 C
ATOM 8 O4' A A1120 -72.280 98.518 170.072 1.00 0.14 O
ATOM 9 C3' A A1120 -71.058 99.817 171.564 1.00 0.14 C
ATOM 10 O3' A A1120 -70.477 99.882 172.843 1.00 0.14 O
ATOM 11 C2' A A1120 -70.100 99.318 170.494 1.00 0.14 C
ATOM 12 O2' A A1120 -69.355 98.201 170.963 1.00 0.14 O
ATOM 13 C1' A A1120 -71.064 98.838 169.425 1.00 0.14 C
ATOM 14 N9 A A1120 -71.348 99.867 168.412 1.00 0.01 N
ATOM 15 C8 A A1120 -71.719 101.187 168.529 1.00 0.01 C
ATOM 16 N7 A A1120 -71.944 101.770 167.381 1.00 0.01 N
ATOM 17 C5 A A1120 -71.726 100.753 166.475 1.00 0.01 C
ATOM 18 C6 A A1120 -71.802 100.678 165.094 1.00 0.01 C
ATOM 19 N6 A A1120 -72.138 101.693 164.337 1.00 0.01 N
ATOM 20 N1 A A1120 -71.510 99.515 164.490 1.00 0.01 N
ATOM 21 C2 A A1120 -71.166 98.460 165.233 1.00 0.01 C
ATOM 22 N3 A A1120 -71.062 98.392 166.553 1.00 0.01 N
ATOM 23 C4 A A1120 -71.366 99.583 167.097 1.00 0.01 C
ATOM 24 P G A1121 -70.129 101.309 173.469 1.00 7.87 P
ATOM 25 OP1 G A1121 -70.210 101.168 174.940 1.00 7.87 O
ATOM 26 OP2 G A1121 -71.019 102.295 172.784 1.00 7.87 O
ATOM 27 O5' G A1121 -68.622 101.543 173.031 1.00 7.87 O
TER
ATOM 1 O3' A B2508 -64.436 98.196 173.542 1.00 0.01 O
ATOM 2 P C B2509 -65.141 96.783 173.757 1.00 0.05 P
ATOM 3 OP1 C B2509 -66.457 97.029 174.414 1.00 0.05 O
ATOM 4 OP2 C B2509 -64.147 95.902 174.431 1.00 0.05 O
ATOM 5 O5' C B2509 -65.362 96.286 172.270 1.00 0.05 O
ATOM 6 C5' C B2509 -65.935 97.127 171.284 1.00 0.05 C
ATOM 7 C4' C B2509 -66.095 96.377 170.000 1.00 0.05 C
ATOM 8 O4' C B2509 -64.789 96.239 169.371 1.00 0.05 O
ATOM 9 C3' C B2509 -66.625 94.958 170.174 1.00 0.05 C
ATOM 10 O3' C B2509 -67.422 94.603 169.064 1.00 0.05 O
ATOM 11 C2' C B2509 -65.362 94.112 170.174 1.00 0.05 C
ATOM 12 O2' C B2509 -65.544 92.772 169.774 1.00 0.05 O
ATOM 13 C1' C B2509 -64.490 94.864 169.191 1.00 0.05 C
ATOM 14 N1 C B2509 -63.064 94.656 169.424 1.00 0.09 N
ATOM 15 C2 C B2509 -62.268 94.598 168.322 1.00 0.09 C
ATOM 16 O2 C B2509 -62.843 94.779 167.248 1.00 0.09 O
ATOM 17 N3 C B2509 -60.946 94.386 168.448 1.00 0.09 N
ATOM 18 C4 C B2509 -60.442 94.230 169.651 1.00 0.09 C
ATOM 19 N4 C B2509 -59.135 94.027 169.748 1.00 0.09 N
ATOM 20 C5 C B2509 -61.238 94.261 170.817 1.00 0.09 C
ATOM 21 C6 C B2509 -62.540 94.467 170.659 1.00 0.09 C
ATOM 22 P A B2510 -69.002 94.596 169.199 1.00 0.01 P
ATOM 23 OP1 A B2510 -69.387 95.901 169.722 1.00 0.01 O
ATOM 24 OP2 A B2510 -69.390 93.396 169.950 1.00 0.01 O
ATOM 25 O5' A B2510 -69.445 94.472 167.704 1.00 0.01 O
TER
ATOM 2 P A A1120 -75.337 97.648 172.854 1.00 0.14 P
ATOM 3 OP1 A A1120 -75.702 96.272 172.424 1.00 0.14 O
ATOM 4 OP2 A A1120 -74.590 97.827 174.135 1.00 0.14 O
ATOM 5 O5' A A1120 -74.565 98.400 171.675 1.00 0.14 O
ATOM 6 C5' A A1120 -73.528 99.328 171.963 1.00 0.14 C
ATOM 7 C4' A A1120 -72.196 98.830 171.482 1.00 0.14 C
ATOM 8 O4' A A1120 -72.280 98.518 170.072 1.00 0.14 O
ATOM 9 C3' A A1120 -71.058 99.817 171.564 1.00 0.14 C
ATOM 10 O3' A A1120 -70.477 99.882 172.843 1.00 0.14 O
ATOM 11 C2' A A1120 -70.100 99.318 170.494 1.00 0.14 C
ATOM 12 O2' A A1120 -69.355 98.201 170.963 1.00 0.14 O
ATOM 13 C1' A A1120 -71.064 98.838 169.425 1.00 0.14 C
ATOM 14 N9 A A1120 -71.348 99.867 168.412 1.00 0.01 N
ATOM 15 C8 A A1120 -71.719 101.187 168.529 1.00 0.01 C
ATOM 16 N7 A A1120 -71.944 101.770 167.381 1.00 0.01 N
ATOM 17 C5 A A1120 -71.726 100.753 166.475 1.00 0.01 C
ATOM 18 C6 A A1120 -71.802 100.678 165.094 1.00 0.01 C
ATOM 19 N6 A A1120 -72.138 101.693 164.337 1.00 0.01 N
ATOM 20 N1 A A1120 -71.510 99.515 164.490 1.00 0.01 N
ATOM 21 C2 A A1120 -71.166 98.460 165.233 1.00 0.01 C
ATOM 22 N3 A A1120 -71.062 98.392 166.553 1.00 0.01 N
ATOM 23 C4 A A1120 -71.366 99.583 167.097 1.00 0.01 C
ATOM 24 P G A1121 -70.129 101.309 173.469 1.00 7.87 P
ATOM 25 OP1 G A1121 -70.210 101.168 174.940 1.00 7.87 O
ATOM 26 OP2 G A1121 -71.019 102.295 172.784 1.00 7.87 O
ATOM 27 O5' G A1121 -68.622 101.543 173.031 1.00 7.87 O
TER
ATOM 1 O3' A B2508 -64.436 98.196 173.542 1.00 0.01 O
ATOM 2 P C B2509 -65.141 96.783 173.757 1.00 0.05 P
ATOM 3 OP1 C B2509 -66.457 97.029 174.414 1.00 0.05 O
ATOM 4 OP2 C B2509 -64.147 95.902 174.431 1.00 0.05 O
ATOM 5 O5' C B2509 -65.362 96.286 172.270 1.00 0.05 O
ATOM 6 C5' C B2509 -65.935 97.127 171.284 1.00 0.05 C
ATOM 7 C4' C B2509 -66.095 96.377 170.000 1.00 0.05 C
ATOM 8 O4' C B2509 -64.789 96.239 169.371 1.00 0.05 O
ATOM 9 C3' C B2509 -66.625 94.958 170.174 1.00 0.05 C
ATOM 10 O3' C B2509 -67.422 94.603 169.064 1.00 0.05 O
ATOM 11 C2' C B2509 -65.362 94.112 170.174 1.00 0.05 C
ATOM 12 O2' C B2509 -65.544 92.772 169.774 1.00 0.05 O
ATOM 13 C1' C B2509 -64.490 94.864 169.191 1.00 0.05 C
ATOM 14 N1 C B2509 -63.064 94.656 169.424 1.00 0.09 N
ATOM 15 C2 C B2509 -62.268 94.598 168.322 1.00 0.09 C
ATOM 16 O2 C B2509 -62.843 94.779 167.248 1.00 0.09 O
ATOM 17 N3 C B2509 -60.946 94.386 168.448 1.00 0.09 N
ATOM 18 C4 C B2509 -60.442 94.230 169.651 1.00 0.09 C
ATOM 19 N4 C B2509 -59.135 94.027 169.748 1.00 0.09 N
ATOM 20 C5 C B2509 -61.238 94.261 170.817 1.00 0.09 C
ATOM 21 C6 C B2509 -62.540 94.467 170.659 1.00 0.09 C
ATOM 22 P A B2510 -69.002 94.596 169.199 1.00 0.01 P
ATOM 23 OP1 A B2510 -69.387 95.901 169.722 1.00 0.01 O
ATOM 24 OP2 A B2510 -69.390 93.396 169.950 1.00 0.01 O
ATOM 25 O5' A B2510 -69.445 94.472 167.704 1.00 0.01 O
TER
Atoms:
OP1: (-75.702,96.272,172.424)
OP2: (-74.590,97.827,174.135)
C3': (-71.058,99.817,171.564)
C1': (-71.064,98.838,169.425)
C5': (-73.528,99.328,171.963)
O4': (-72.280,98.518,170.072)
C8: (-71.719,101.187,168.529)
O2': (-69.355,98.201,170.963)
C6: (-71.802,100.678,165.094)
C5: (-71.726,100.753,166.475)
C4: (-71.366,99.583,167.097)
P: (-75.337,97.648,172.854)
C4': (-72.196,98.830,171.482)
C2': (-70.100,99.318,170.494)
C2: (-71.166,98.460,165.233)
N1: (-71.510,99.515,164.490)
N3: (-71.062,98.392,166.553)
N6: (-72.138,101.693,164.337)
N7: (-71.944,101.770,167.381)
N9: (-71.348,99.867,168.412)
O5': (-74.565,98.400,171.675)
O3': (-70.477,99.882,172.843)
OP2: (-74.590,97.827,174.135)
C3': (-71.058,99.817,171.564)
C1': (-71.064,98.838,169.425)
C5': (-73.528,99.328,171.963)
O4': (-72.280,98.518,170.072)
C8: (-71.719,101.187,168.529)
O2': (-69.355,98.201,170.963)
C6: (-71.802,100.678,165.094)
C5: (-71.726,100.753,166.475)
C4: (-71.366,99.583,167.097)
P: (-75.337,97.648,172.854)
C4': (-72.196,98.830,171.482)
C2': (-70.100,99.318,170.494)
C2: (-71.166,98.460,165.233)
N1: (-71.510,99.515,164.490)
N3: (-71.062,98.392,166.553)
N6: (-72.138,101.693,164.337)
N7: (-71.944,101.770,167.381)
N9: (-71.348,99.867,168.412)
O5': (-74.565,98.400,171.675)
O3': (-70.477,99.882,172.843)
C2: (-62.268,94.598,168.322)
OP1: (-66.457,97.029,174.414)
OP2: (-64.147,95.902,174.431)
C4: (-60.442,94.230,169.651)
O5': (-65.362,96.286,172.270)
C3': (-66.625,94.958,170.174)
C1': (-64.490,94.864,169.191)
O4': (-64.789,96.239,169.371)
C5': (-65.935,97.127,171.284)
P: (-65.141,96.783,173.757)
O2: (-62.843,94.779,167.248)
C4': (-66.095,96.377,170.000)
C2': (-65.362,94.112,170.174)
O2': (-65.544,92.772,169.774)
N1: (-63.064,94.656,169.424)
N3: (-60.946,94.386,168.448)
N4: (-59.135,94.027,169.748)
C6: (-62.540,94.467,170.659)
C5: (-61.238,94.261,170.817)
O3': (-67.422,94.603,169.064)
OP1: (-66.457,97.029,174.414)
OP2: (-64.147,95.902,174.431)
C4: (-60.442,94.230,169.651)
O5': (-65.362,96.286,172.270)
C3': (-66.625,94.958,170.174)
C1': (-64.490,94.864,169.191)
O4': (-64.789,96.239,169.371)
C5': (-65.935,97.127,171.284)
P: (-65.141,96.783,173.757)
O2: (-62.843,94.779,167.248)
C4': (-66.095,96.377,170.000)
C2': (-65.362,94.112,170.174)
O2': (-65.544,92.772,169.774)
N1: (-63.064,94.656,169.424)
N3: (-60.946,94.386,168.448)
N4: (-59.135,94.027,169.748)
C6: (-62.540,94.467,170.659)
C5: (-61.238,94.261,170.817)
O3': (-67.422,94.603,169.064)
Image (generated by PyMOL):