ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3GS5:C8:C26

Extra

PDB:
ATOM 1 O3' A A 7 29.954 17.028 37.616 1.00 73.99 O
ATOM 2 P A A 8 31.179 16.116 38.079 1.00 78.75 P
ATOM 3 OP1 A A 8 31.568 15.266 36.936 1.00 78.64 O
ATOM 4 OP2 A A 8 30.820 15.489 39.381 1.00 74.18 O
ATOM 5 O5' A A 8 32.331 17.181 38.292 1.00 71.62 O
ATOM 6 C5' A A 8 32.636 18.112 37.274 1.00 69.06 C
ATOM 7 C4' A A 8 33.553 19.156 37.825 1.00 73.07 C
ATOM 8 O4' A A 8 32.802 19.982 38.744 1.00 78.13 O
ATOM 9 C3' A A 8 34.694 18.604 38.667 1.00 73.16 C
ATOM 10 O3' A A 8 35.814 18.207 37.883 1.00 73.72 O
ATOM 11 C2' A A 8 35.028 19.787 39.558 1.00 73.99 C
ATOM 12 O2' A A 8 35.843 20.749 38.921 1.00 74.48 O
ATOM 13 C1' A A 8 33.635 20.353 39.830 1.00 76.68 C
ATOM 14 N9 A A 8 33.063 19.814 41.065 1.00 71.94 N
ATOM 15 C8 A A 8 32.068 18.882 41.215 1.00 69.76 C
ATOM 16 N7 A A 8 31.782 18.616 42.464 1.00 70.14 N
ATOM 17 C5 A A 8 32.648 19.426 43.184 1.00 68.36 C
ATOM 18 C6 A A 8 32.844 19.608 44.556 1.00 68.20 C
ATOM 19 N6 A A 8 32.153 18.949 45.489 1.00 64.99 N
ATOM 20 N1 A A 8 33.786 20.496 44.944 1.00 68.39 N
ATOM 21 C2 A A 8 34.481 21.144 44.004 1.00 68.27 C
ATOM 22 N3 A A 8 34.391 21.052 42.685 1.00 68.32 N
ATOM 23 C4 A A 8 33.443 20.167 42.337 1.00 68.63 C
ATOM 24 P A A 9 36.731 16.968 38.364 1.00 78.76 P
ATOM 25 OP1 A A 9 37.743 16.714 37.302 1.00 76.10 O
ATOM 26 OP2 A A 9 35.857 15.854 38.841 1.00 70.65 O
ATOM 27 O5' A A 9 37.508 17.533 39.628 1.00 73.11 O
TER

ATOM 1 O3' C B 25 21.482 13.189 47.629 1.00 80.35 O
ATOM 2 P A B 26 21.710 14.748 47.340 1.00 82.10 P
ATOM 3 OP1 A B 26 20.576 15.447 48.002 1.00 80.06 O
ATOM 4 OP2 A B 26 21.951 14.952 45.879 1.00 80.02 O
ATOM 5 O5' A B 26 23.037 15.093 48.141 1.00 75.66 O
ATOM 6 C5' A B 26 23.188 14.713 49.497 1.00 66.71 C
ATOM 7 C4' A B 26 24.547 15.135 49.982 1.00 67.00 C
ATOM 8 O4' A B 26 25.547 14.501 49.150 1.00 68.07 O
ATOM 9 C3' A B 26 24.839 16.612 49.822 1.00 66.42 C
ATOM 10 O3' A B 26 24.390 17.313 50.952 1.00 66.11 O
ATOM 11 C2' A B 26 26.356 16.653 49.748 1.00 63.07 C
ATOM 12 O2' A B 26 26.995 16.593 51.006 1.00 61.16 O
ATOM 13 C1' A B 26 26.642 15.382 48.959 1.00 61.38 C
ATOM 14 N9 A B 26 26.787 15.631 47.528 1.00 57.70 N
ATOM 15 C8 A B 26 25.932 15.260 46.523 1.00 55.70 C
ATOM 16 N7 A B 26 26.348 15.601 45.324 1.00 55.08 N
ATOM 17 C5 A B 26 27.559 16.251 45.557 1.00 53.33 C
ATOM 18 C6 A B 26 28.521 16.867 44.696 1.00 54.43 C
ATOM 19 N6 A B 26 28.410 16.945 43.361 1.00 60.52 N
ATOM 20 N1 A B 26 29.614 17.415 45.272 1.00 53.76 N
ATOM 21 C2 A B 26 29.728 17.363 46.603 1.00 52.54 C
ATOM 22 N3 A B 26 28.906 16.832 47.508 1.00 53.27 N
ATOM 23 C4 A B 26 27.834 16.283 46.915 1.00 55.41 C
ATOM 24 P U B 27 23.744 18.758 50.761 1.00 65.09 P
ATOM 25 OP1 U B 27 23.218 19.149 52.089 1.00 63.64 O
ATOM 26 OP2 U B 27 22.843 18.704 49.584 1.00 62.06 O
ATOM 27 O5' U B 27 24.979 19.690 50.403 1.00 60.59 O
TER

Atoms:
OP1: (31.568,15.266,36.936)
OP2: (30.820,15.489,39.381)
C3': (34.694,18.604,38.667)
C1': (33.635,20.353,39.830)
C5': (32.636,18.112,37.274)
O4': (32.802,19.982,38.744)
C8: (32.068,18.882,41.215)
O2': (35.843,20.749,38.921)
C6: (32.844,19.608,44.556)
C5: (32.648,19.426,43.184)
C4: (33.443,20.167,42.337)
P: (31.179,16.116,38.079)
C4': (33.553,19.156,37.825)
C2': (35.028,19.787,39.558)
C2: (34.481,21.144,44.004)
N1: (33.786,20.496,44.944)
N3: (34.391,21.052,42.685)
N6: (32.153,18.949,45.489)
N7: (31.782,18.616,42.464)
N9: (33.063,19.814,41.065)
O5': (32.331,17.181,38.292)
O3': (35.814,18.207,37.883)
OP1: (20.576,15.447,48.002)
OP2: (21.951,14.952,45.879)
C3': (24.839,16.612,49.822)
C1': (26.642,15.382,48.959)
C5': (23.188,14.713,49.497)
O4': (25.547,14.501,49.150)
C8: (25.932,15.260,46.523)
O2': (26.995,16.593,51.006)
C6: (28.521,16.867,44.696)
C5: (27.559,16.251,45.557)
C4: (27.834,16.283,46.915)
P: (21.710,14.748,47.340)
C4': (24.547,15.135,49.982)
C2': (26.356,16.653,49.748)
C2: (29.728,17.363,46.603)
N1: (29.614,17.415,45.272)
N3: (28.906,16.832,47.508)
N6: (28.410,16.945,43.361)
N7: (26.348,15.601,45.324)
N9: (26.787,15.631,47.528)
O5': (23.037,15.093,48.141)
O3': (24.390,17.313,50.952)
Image (generated by PyMOL):
PyMOL image
show in jmol