Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DH3:G8:G9
Extra
PDB:
ATOM 1 O3' C A 7 41.023 -38.820 -12.974 1.00 43.09 O
ATOM 2 P G A 8 42.009 -37.640 -13.387 1.00 45.50 P
ATOM 3 OP1 G A 8 43.192 -38.199 -14.060 1.00 45.87 O
ATOM 4 OP2 G A 8 42.253 -36.793 -12.201 1.00 45.68 O
ATOM 5 O5' G A 8 41.133 -36.823 -14.452 1.00 46.52 O
ATOM 6 C5' G A 8 40.750 -37.373 -15.698 1.00 47.18 C
ATOM 7 C4' G A 8 39.672 -36.492 -16.251 1.00 48.10 C
ATOM 8 O4' G A 8 38.649 -36.381 -15.232 1.00 47.82 O
ATOM 9 C3' G A 8 40.093 -35.057 -16.487 1.00 49.31 C
ATOM 10 O3' G A 8 40.634 -34.787 -17.770 1.00 51.41 O
ATOM 11 C2' G A 8 38.757 -34.363 -16.388 1.00 49.21 C
ATOM 12 O2' G A 8 38.027 -34.540 -17.580 1.00 49.58 O
ATOM 13 C1' G A 8 38.106 -35.083 -15.230 1.00 47.54 C
ATOM 14 N9 G A 8 38.315 -34.454 -13.935 1.00 46.26 N
ATOM 15 C8 G A 8 39.285 -34.690 -12.997 1.00 45.76 C
ATOM 16 N7 G A 8 39.168 -33.955 -11.926 1.00 44.71 N
ATOM 17 C5 G A 8 38.036 -33.192 -12.170 1.00 45.87 C
ATOM 18 C6 G A 8 37.375 -32.212 -11.405 1.00 46.40 C
ATOM 19 O6 G A 8 37.636 -31.765 -10.303 1.00 48.49 O
ATOM 20 N1 G A 8 36.268 -31.682 -12.017 1.00 46.26 N
ATOM 21 C2 G A 8 35.826 -32.036 -13.237 1.00 45.90 C
ATOM 22 N2 G A 8 34.732 -31.387 -13.641 1.00 46.20 N
ATOM 23 N3 G A 8 36.414 -32.953 -13.985 1.00 46.00 N
ATOM 24 C4 G A 8 37.509 -33.486 -13.395 1.00 46.26 C
ATOM 25 P U A 9 42.040 -34.046 -17.891 1.00 52.91 P
ATOM 26 OP1 U A 9 42.756 -34.630 -19.025 1.00 54.48 O
ATOM 27 OP2 U A 9 42.716 -34.070 -16.585 1.00 54.30 O
ATOM 28 O5' U A 9 41.704 -32.545 -18.202 1.00 56.47 O
TER
ATOM 1 O3' G B 8 40.634 -34.787 -17.770 1.00 51.41 O
ATOM 2 P U B 9 42.040 -34.046 -17.891 1.00 52.91 P
ATOM 3 OP1 U B 9 42.756 -34.630 -19.025 1.00 54.48 O
ATOM 4 OP2 U B 9 42.716 -34.070 -16.585 1.00 54.30 O
ATOM 5 O5' U B 9 41.704 -32.545 -18.202 1.00 56.47 O
ATOM 6 C5' U B 9 40.594 -32.242 -18.945 1.00 61.55 C
ATOM 7 C4' U B 9 40.525 -30.732 -18.964 1.00 64.55 C
ATOM 8 O4' U B 9 41.696 -30.147 -18.350 1.00 65.52 O
ATOM 9 C3' U B 9 40.484 -30.145 -20.356 1.00 66.37 C
ATOM 10 O3' U B 9 39.173 -30.431 -20.867 1.00 65.58 O
ATOM 11 C2' U B 9 40.961 -28.700 -20.080 1.00 67.91 C
ATOM 12 O2' U B 9 40.037 -27.702 -19.710 1.00 68.34 O
ATOM 13 C1' U B 9 41.817 -28.833 -18.839 1.00 68.02 C
ATOM 14 N1 U B 9 43.215 -28.600 -19.125 1.00 70.47 N
ATOM 15 C2 U B 9 43.837 -27.593 -18.445 1.00 71.69 C
ATOM 16 O2 U B 9 43.259 -26.894 -17.636 1.00 70.93 O
ATOM 17 N3 U B 9 45.164 -27.459 -18.760 1.00 73.03 N
ATOM 18 C4 U B 9 45.888 -28.215 -19.671 1.00 73.65 C
ATOM 19 O4 U B 9 47.075 -27.975 -19.859 1.00 74.19 O
ATOM 20 C5 U B 9 45.147 -29.251 -20.345 1.00 72.89 C
ATOM 21 C6 U B 9 43.860 -29.398 -20.049 1.00 71.61 C
ATOM 22 P G B 10 38.073 -29.340 -21.206 1.00 65.34 P
ATOM 23 OP1 G B 10 36.753 -29.791 -20.697 1.00 65.59 O
ATOM 24 OP2 G B 10 38.308 -29.097 -22.633 1.00 66.85 O
ATOM 25 O5' G B 10 38.543 -27.984 -20.474 1.00 68.04 O
TER
ATOM 2 P G A 8 42.009 -37.640 -13.387 1.00 45.50 P
ATOM 3 OP1 G A 8 43.192 -38.199 -14.060 1.00 45.87 O
ATOM 4 OP2 G A 8 42.253 -36.793 -12.201 1.00 45.68 O
ATOM 5 O5' G A 8 41.133 -36.823 -14.452 1.00 46.52 O
ATOM 6 C5' G A 8 40.750 -37.373 -15.698 1.00 47.18 C
ATOM 7 C4' G A 8 39.672 -36.492 -16.251 1.00 48.10 C
ATOM 8 O4' G A 8 38.649 -36.381 -15.232 1.00 47.82 O
ATOM 9 C3' G A 8 40.093 -35.057 -16.487 1.00 49.31 C
ATOM 10 O3' G A 8 40.634 -34.787 -17.770 1.00 51.41 O
ATOM 11 C2' G A 8 38.757 -34.363 -16.388 1.00 49.21 C
ATOM 12 O2' G A 8 38.027 -34.540 -17.580 1.00 49.58 O
ATOM 13 C1' G A 8 38.106 -35.083 -15.230 1.00 47.54 C
ATOM 14 N9 G A 8 38.315 -34.454 -13.935 1.00 46.26 N
ATOM 15 C8 G A 8 39.285 -34.690 -12.997 1.00 45.76 C
ATOM 16 N7 G A 8 39.168 -33.955 -11.926 1.00 44.71 N
ATOM 17 C5 G A 8 38.036 -33.192 -12.170 1.00 45.87 C
ATOM 18 C6 G A 8 37.375 -32.212 -11.405 1.00 46.40 C
ATOM 19 O6 G A 8 37.636 -31.765 -10.303 1.00 48.49 O
ATOM 20 N1 G A 8 36.268 -31.682 -12.017 1.00 46.26 N
ATOM 21 C2 G A 8 35.826 -32.036 -13.237 1.00 45.90 C
ATOM 22 N2 G A 8 34.732 -31.387 -13.641 1.00 46.20 N
ATOM 23 N3 G A 8 36.414 -32.953 -13.985 1.00 46.00 N
ATOM 24 C4 G A 8 37.509 -33.486 -13.395 1.00 46.26 C
ATOM 25 P U A 9 42.040 -34.046 -17.891 1.00 52.91 P
ATOM 26 OP1 U A 9 42.756 -34.630 -19.025 1.00 54.48 O
ATOM 27 OP2 U A 9 42.716 -34.070 -16.585 1.00 54.30 O
ATOM 28 O5' U A 9 41.704 -32.545 -18.202 1.00 56.47 O
TER
ATOM 1 O3' G B 8 40.634 -34.787 -17.770 1.00 51.41 O
ATOM 2 P U B 9 42.040 -34.046 -17.891 1.00 52.91 P
ATOM 3 OP1 U B 9 42.756 -34.630 -19.025 1.00 54.48 O
ATOM 4 OP2 U B 9 42.716 -34.070 -16.585 1.00 54.30 O
ATOM 5 O5' U B 9 41.704 -32.545 -18.202 1.00 56.47 O
ATOM 6 C5' U B 9 40.594 -32.242 -18.945 1.00 61.55 C
ATOM 7 C4' U B 9 40.525 -30.732 -18.964 1.00 64.55 C
ATOM 8 O4' U B 9 41.696 -30.147 -18.350 1.00 65.52 O
ATOM 9 C3' U B 9 40.484 -30.145 -20.356 1.00 66.37 C
ATOM 10 O3' U B 9 39.173 -30.431 -20.867 1.00 65.58 O
ATOM 11 C2' U B 9 40.961 -28.700 -20.080 1.00 67.91 C
ATOM 12 O2' U B 9 40.037 -27.702 -19.710 1.00 68.34 O
ATOM 13 C1' U B 9 41.817 -28.833 -18.839 1.00 68.02 C
ATOM 14 N1 U B 9 43.215 -28.600 -19.125 1.00 70.47 N
ATOM 15 C2 U B 9 43.837 -27.593 -18.445 1.00 71.69 C
ATOM 16 O2 U B 9 43.259 -26.894 -17.636 1.00 70.93 O
ATOM 17 N3 U B 9 45.164 -27.459 -18.760 1.00 73.03 N
ATOM 18 C4 U B 9 45.888 -28.215 -19.671 1.00 73.65 C
ATOM 19 O4 U B 9 47.075 -27.975 -19.859 1.00 74.19 O
ATOM 20 C5 U B 9 45.147 -29.251 -20.345 1.00 72.89 C
ATOM 21 C6 U B 9 43.860 -29.398 -20.049 1.00 71.61 C
ATOM 22 P G B 10 38.073 -29.340 -21.206 1.00 65.34 P
ATOM 23 OP1 G B 10 36.753 -29.791 -20.697 1.00 65.59 O
ATOM 24 OP2 G B 10 38.308 -29.097 -22.633 1.00 66.85 O
ATOM 25 O5' G B 10 38.543 -27.984 -20.474 1.00 68.04 O
TER
Atoms:
OP1: (43.192,-38.199,-14.060)
OP2: (42.253,-36.793,-12.201)
C3': (40.093,-35.057,-16.487)
C1': (38.106,-35.083,-15.230)
C5': (40.750,-37.373,-15.698)
O6: (37.636,-31.765,-10.303)
O4': (38.649,-36.381,-15.232)
C8: (39.285,-34.690,-12.997)
C2: (35.826,-32.036,-13.237)
C6: (37.375,-32.212,-11.405)
C5: (38.036,-33.192,-12.170)
C4: (37.509,-33.486,-13.395)
P: (42.009,-37.640,-13.387)
C4': (39.672,-36.492,-16.251)
C2': (38.757,-34.363,-16.388)
O2': (38.027,-34.540,-17.580)
N1: (36.268,-31.682,-12.017)
N2: (34.732,-31.387,-13.641)
N3: (36.414,-32.953,-13.985)
N7: (39.168,-33.955,-11.926)
N9: (38.315,-34.454,-13.935)
O5': (41.133,-36.823,-14.452)
O3': (40.634,-34.787,-17.770)
OP2: (42.253,-36.793,-12.201)
C3': (40.093,-35.057,-16.487)
C1': (38.106,-35.083,-15.230)
C5': (40.750,-37.373,-15.698)
O6: (37.636,-31.765,-10.303)
O4': (38.649,-36.381,-15.232)
C8: (39.285,-34.690,-12.997)
C2: (35.826,-32.036,-13.237)
C6: (37.375,-32.212,-11.405)
C5: (38.036,-33.192,-12.170)
C4: (37.509,-33.486,-13.395)
P: (42.009,-37.640,-13.387)
C4': (39.672,-36.492,-16.251)
C2': (38.757,-34.363,-16.388)
O2': (38.027,-34.540,-17.580)
N1: (36.268,-31.682,-12.017)
N2: (34.732,-31.387,-13.641)
N3: (36.414,-32.953,-13.985)
N7: (39.168,-33.955,-11.926)
N9: (38.315,-34.454,-13.935)
O5': (41.133,-36.823,-14.452)
O3': (40.634,-34.787,-17.770)
C4: (45.888,-28.215,-19.671)
N3: (45.164,-27.459,-18.760)
OP1: (42.756,-34.630,-19.025)
OP2: (42.716,-34.070,-16.585)
C2: (43.837,-27.593,-18.445)
C1': (41.817,-28.833,-18.839)
C3': (40.484,-30.145,-20.356)
O5': (41.704,-32.545,-18.202)
O4': (41.696,-30.147,-18.350)
C5': (40.594,-32.242,-18.945)
P: (42.040,-34.046,-17.891)
C4': (40.525,-30.732,-18.964)
C2': (40.961,-28.700,-20.080)
O2': (40.037,-27.702,-19.710)
N1: (43.215,-28.600,-19.125)
O4: (47.075,-27.975,-19.859)
O2: (43.259,-26.894,-17.636)
C6: (43.860,-29.398,-20.049)
C5: (45.147,-29.251,-20.345)
O3': (39.173,-30.431,-20.867)
N3: (45.164,-27.459,-18.760)
OP1: (42.756,-34.630,-19.025)
OP2: (42.716,-34.070,-16.585)
C2: (43.837,-27.593,-18.445)
C1': (41.817,-28.833,-18.839)
C3': (40.484,-30.145,-20.356)
O5': (41.704,-32.545,-18.202)
O4': (41.696,-30.147,-18.350)
C5': (40.594,-32.242,-18.945)
P: (42.040,-34.046,-17.891)
C4': (40.525,-30.732,-18.964)
C2': (40.961,-28.700,-20.080)
O2': (40.037,-27.702,-19.710)
N1: (43.215,-28.600,-19.125)
O4: (47.075,-27.975,-19.859)
O2: (43.259,-26.894,-17.636)
C6: (43.860,-29.398,-20.049)
C5: (45.147,-29.251,-20.345)
O3': (39.173,-30.431,-20.867)
Image (generated by PyMOL):