Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DH3:E8:E9
Extra
PDB:
ATOM 1 O3' C A 7 37.437 -3.681 58.110 1.00 46.55 O
ATOM 2 P G A 8 37.990 -4.630 59.262 1.00 47.81 P
ATOM 3 OP1 G A 8 39.309 -4.091 59.675 1.00 47.70 O
ATOM 4 OP2 G A 8 37.803 -6.041 58.832 1.00 47.19 O
ATOM 5 O5' G A 8 37.037 -4.406 60.501 1.00 47.35 O
ATOM 6 C5' G A 8 37.227 -5.268 61.592 1.00 48.17 C
ATOM 7 C4' G A 8 35.906 -5.886 61.977 1.00 48.99 C
ATOM 8 O4' G A 8 34.921 -5.715 60.938 1.00 48.82 O
ATOM 9 C3' G A 8 35.983 -7.375 62.156 1.00 50.61 C
ATOM 10 O3' G A 8 36.531 -7.683 63.432 1.00 53.61 O
ATOM 11 C2' G A 8 34.517 -7.751 62.043 1.00 50.14 C
ATOM 12 O2' G A 8 33.840 -7.479 63.250 1.00 49.46 O
ATOM 13 C1' G A 8 34.062 -6.852 60.893 1.00 49.56 C
ATOM 14 N9 G A 8 34.110 -7.478 59.548 1.00 49.41 N
ATOM 15 C8 G A 8 35.060 -7.254 58.560 1.00 48.21 C
ATOM 16 N7 G A 8 34.850 -7.936 57.460 1.00 47.35 N
ATOM 17 C5 G A 8 33.689 -8.664 57.716 1.00 48.33 C
ATOM 18 C6 G A 8 32.975 -9.572 56.887 1.00 48.49 C
ATOM 19 O6 G A 8 33.203 -9.952 55.731 1.00 50.13 O
ATOM 20 N1 G A 8 31.857 -10.077 57.517 1.00 47.28 N
ATOM 21 C2 G A 8 31.468 -9.752 58.774 1.00 46.82 C
ATOM 22 N2 G A 8 30.350 -10.386 59.129 1.00 47.28 N
ATOM 23 N3 G A 8 32.099 -8.906 59.589 1.00 46.94 N
ATOM 24 C4 G A 8 33.213 -8.396 58.995 1.00 48.51 C
ATOM 25 P U A 9 38.031 -8.224 63.476 1.00 55.85 P
ATOM 26 OP1 U A 9 38.739 -7.380 64.471 1.00 56.31 O
ATOM 27 OP2 U A 9 38.590 -8.270 62.111 1.00 54.59 O
ATOM 28 O5' U A 9 37.761 -9.724 63.978 1.00 57.98 O
TER
ATOM 1 O3' G B 8 36.531 -7.683 63.432 1.00 53.61 O
ATOM 2 P U B 9 38.031 -8.224 63.476 1.00 55.85 P
ATOM 3 OP1 U B 9 38.739 -7.380 64.471 1.00 56.31 O
ATOM 4 OP2 U B 9 38.590 -8.270 62.111 1.00 54.59 O
ATOM 5 O5' U B 9 37.761 -9.724 63.978 1.00 57.98 O
ATOM 6 C5' U B 9 36.405 -10.161 63.993 1.00 62.08 C
ATOM 7 C4' U B 9 36.180 -11.591 64.445 1.00 65.03 C
ATOM 8 O4' U B 9 37.254 -12.480 64.046 1.00 66.25 O
ATOM 9 C3' U B 9 36.068 -11.626 65.963 1.00 67.31 C
ATOM 10 O3' U B 9 34.697 -11.710 66.395 1.00 68.51 O
ATOM 11 C2' U B 9 36.971 -12.784 66.384 1.00 68.59 C
ATOM 12 O2' U B 9 36.385 -13.770 67.216 1.00 68.76 O
ATOM 13 C1' U B 9 37.406 -13.432 65.070 1.00 68.91 C
ATOM 14 N1 U B 9 38.820 -13.906 65.196 1.00 71.97 N
ATOM 15 C2 U B 9 39.430 -14.478 64.100 1.00 73.65 C
ATOM 16 O2 U B 9 38.880 -14.600 63.011 1.00 73.70 O
ATOM 17 N3 U B 9 40.726 -14.901 64.346 1.00 74.50 N
ATOM 18 C4 U B 9 41.450 -14.811 65.537 1.00 74.50 C
ATOM 19 O4 U B 9 42.609 -15.235 65.586 1.00 74.85 O
ATOM 20 C5 U B 9 40.739 -14.202 66.635 1.00 73.67 C
ATOM 21 C6 U B 9 39.487 -13.792 66.422 1.00 72.85 C
ATOM 22 P G B 10 33.844 -13.082 66.394 1.00 71.08 P
ATOM 23 OP1 G B 10 32.396 -12.736 66.207 1.00 69.10 O
ATOM 24 OP2 G B 10 34.196 -13.807 67.645 1.00 70.43 O
ATOM 25 O5' G B 10 34.517 -13.920 65.158 1.00 70.04 O
TER
ATOM 2 P G A 8 37.990 -4.630 59.262 1.00 47.81 P
ATOM 3 OP1 G A 8 39.309 -4.091 59.675 1.00 47.70 O
ATOM 4 OP2 G A 8 37.803 -6.041 58.832 1.00 47.19 O
ATOM 5 O5' G A 8 37.037 -4.406 60.501 1.00 47.35 O
ATOM 6 C5' G A 8 37.227 -5.268 61.592 1.00 48.17 C
ATOM 7 C4' G A 8 35.906 -5.886 61.977 1.00 48.99 C
ATOM 8 O4' G A 8 34.921 -5.715 60.938 1.00 48.82 O
ATOM 9 C3' G A 8 35.983 -7.375 62.156 1.00 50.61 C
ATOM 10 O3' G A 8 36.531 -7.683 63.432 1.00 53.61 O
ATOM 11 C2' G A 8 34.517 -7.751 62.043 1.00 50.14 C
ATOM 12 O2' G A 8 33.840 -7.479 63.250 1.00 49.46 O
ATOM 13 C1' G A 8 34.062 -6.852 60.893 1.00 49.56 C
ATOM 14 N9 G A 8 34.110 -7.478 59.548 1.00 49.41 N
ATOM 15 C8 G A 8 35.060 -7.254 58.560 1.00 48.21 C
ATOM 16 N7 G A 8 34.850 -7.936 57.460 1.00 47.35 N
ATOM 17 C5 G A 8 33.689 -8.664 57.716 1.00 48.33 C
ATOM 18 C6 G A 8 32.975 -9.572 56.887 1.00 48.49 C
ATOM 19 O6 G A 8 33.203 -9.952 55.731 1.00 50.13 O
ATOM 20 N1 G A 8 31.857 -10.077 57.517 1.00 47.28 N
ATOM 21 C2 G A 8 31.468 -9.752 58.774 1.00 46.82 C
ATOM 22 N2 G A 8 30.350 -10.386 59.129 1.00 47.28 N
ATOM 23 N3 G A 8 32.099 -8.906 59.589 1.00 46.94 N
ATOM 24 C4 G A 8 33.213 -8.396 58.995 1.00 48.51 C
ATOM 25 P U A 9 38.031 -8.224 63.476 1.00 55.85 P
ATOM 26 OP1 U A 9 38.739 -7.380 64.471 1.00 56.31 O
ATOM 27 OP2 U A 9 38.590 -8.270 62.111 1.00 54.59 O
ATOM 28 O5' U A 9 37.761 -9.724 63.978 1.00 57.98 O
TER
ATOM 1 O3' G B 8 36.531 -7.683 63.432 1.00 53.61 O
ATOM 2 P U B 9 38.031 -8.224 63.476 1.00 55.85 P
ATOM 3 OP1 U B 9 38.739 -7.380 64.471 1.00 56.31 O
ATOM 4 OP2 U B 9 38.590 -8.270 62.111 1.00 54.59 O
ATOM 5 O5' U B 9 37.761 -9.724 63.978 1.00 57.98 O
ATOM 6 C5' U B 9 36.405 -10.161 63.993 1.00 62.08 C
ATOM 7 C4' U B 9 36.180 -11.591 64.445 1.00 65.03 C
ATOM 8 O4' U B 9 37.254 -12.480 64.046 1.00 66.25 O
ATOM 9 C3' U B 9 36.068 -11.626 65.963 1.00 67.31 C
ATOM 10 O3' U B 9 34.697 -11.710 66.395 1.00 68.51 O
ATOM 11 C2' U B 9 36.971 -12.784 66.384 1.00 68.59 C
ATOM 12 O2' U B 9 36.385 -13.770 67.216 1.00 68.76 O
ATOM 13 C1' U B 9 37.406 -13.432 65.070 1.00 68.91 C
ATOM 14 N1 U B 9 38.820 -13.906 65.196 1.00 71.97 N
ATOM 15 C2 U B 9 39.430 -14.478 64.100 1.00 73.65 C
ATOM 16 O2 U B 9 38.880 -14.600 63.011 1.00 73.70 O
ATOM 17 N3 U B 9 40.726 -14.901 64.346 1.00 74.50 N
ATOM 18 C4 U B 9 41.450 -14.811 65.537 1.00 74.50 C
ATOM 19 O4 U B 9 42.609 -15.235 65.586 1.00 74.85 O
ATOM 20 C5 U B 9 40.739 -14.202 66.635 1.00 73.67 C
ATOM 21 C6 U B 9 39.487 -13.792 66.422 1.00 72.85 C
ATOM 22 P G B 10 33.844 -13.082 66.394 1.00 71.08 P
ATOM 23 OP1 G B 10 32.396 -12.736 66.207 1.00 69.10 O
ATOM 24 OP2 G B 10 34.196 -13.807 67.645 1.00 70.43 O
ATOM 25 O5' G B 10 34.517 -13.920 65.158 1.00 70.04 O
TER
Atoms:
OP1: (39.309,-4.091,59.675)
OP2: (37.803,-6.041,58.832)
C3': (35.983,-7.375,62.156)
C1': (34.062,-6.852,60.893)
C5': (37.227,-5.268,61.592)
O6: (33.203,-9.952,55.731)
O4': (34.921,-5.715,60.938)
C8: (35.060,-7.254,58.560)
C2: (31.468,-9.752,58.774)
C6: (32.975,-9.572,56.887)
C5: (33.689,-8.664,57.716)
C4: (33.213,-8.396,58.995)
P: (37.990,-4.630,59.262)
C4': (35.906,-5.886,61.977)
C2': (34.517,-7.751,62.043)
O2': (33.840,-7.479,63.250)
N1: (31.857,-10.077,57.517)
N2: (30.350,-10.386,59.129)
N3: (32.099,-8.906,59.589)
N7: (34.850,-7.936,57.460)
N9: (34.110,-7.478,59.548)
O5': (37.037,-4.406,60.501)
O3': (36.531,-7.683,63.432)
OP2: (37.803,-6.041,58.832)
C3': (35.983,-7.375,62.156)
C1': (34.062,-6.852,60.893)
C5': (37.227,-5.268,61.592)
O6: (33.203,-9.952,55.731)
O4': (34.921,-5.715,60.938)
C8: (35.060,-7.254,58.560)
C2: (31.468,-9.752,58.774)
C6: (32.975,-9.572,56.887)
C5: (33.689,-8.664,57.716)
C4: (33.213,-8.396,58.995)
P: (37.990,-4.630,59.262)
C4': (35.906,-5.886,61.977)
C2': (34.517,-7.751,62.043)
O2': (33.840,-7.479,63.250)
N1: (31.857,-10.077,57.517)
N2: (30.350,-10.386,59.129)
N3: (32.099,-8.906,59.589)
N7: (34.850,-7.936,57.460)
N9: (34.110,-7.478,59.548)
O5': (37.037,-4.406,60.501)
O3': (36.531,-7.683,63.432)
C4: (41.450,-14.811,65.537)
N3: (40.726,-14.901,64.346)
OP1: (38.739,-7.380,64.471)
OP2: (38.590,-8.270,62.111)
C2: (39.430,-14.478,64.100)
C1': (37.406,-13.432,65.070)
C3': (36.068,-11.626,65.963)
O5': (37.761,-9.724,63.978)
O4': (37.254,-12.480,64.046)
C5': (36.405,-10.161,63.993)
P: (38.031,-8.224,63.476)
C4': (36.180,-11.591,64.445)
C2': (36.971,-12.784,66.384)
O2': (36.385,-13.770,67.216)
N1: (38.820,-13.906,65.196)
O4: (42.609,-15.235,65.586)
O2: (38.880,-14.600,63.011)
C6: (39.487,-13.792,66.422)
C5: (40.739,-14.202,66.635)
O3': (34.697,-11.710,66.395)
N3: (40.726,-14.901,64.346)
OP1: (38.739,-7.380,64.471)
OP2: (38.590,-8.270,62.111)
C2: (39.430,-14.478,64.100)
C1': (37.406,-13.432,65.070)
C3': (36.068,-11.626,65.963)
O5': (37.761,-9.724,63.978)
O4': (37.254,-12.480,64.046)
C5': (36.405,-10.161,63.993)
P: (38.031,-8.224,63.476)
C4': (36.180,-11.591,64.445)
C2': (36.971,-12.784,66.384)
O2': (36.385,-13.770,67.216)
N1: (38.820,-13.906,65.196)
O4: (42.609,-15.235,65.586)
O2: (38.880,-14.600,63.011)
C6: (39.487,-13.792,66.422)
C5: (40.739,-14.202,66.635)
O3': (34.697,-11.710,66.395)
Image (generated by PyMOL):