Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DH3:H8:H9
Extra
PDB:
ATOM 1 O3' C A 7 3.331 -6.406 6.265 1.00 47.14 O
ATOM 2 P G A 8 3.562 -6.970 7.750 1.00 49.50 P
ATOM 3 OP1 G A 8 3.330 -5.809 8.649 1.00 48.81 O
ATOM 4 OP2 G A 8 4.812 -7.780 7.862 1.00 49.04 O
ATOM 5 O5' G A 8 2.372 -8.042 7.842 1.00 48.47 O
ATOM 6 C5' G A 8 2.448 -8.968 8.904 1.00 48.63 C
ATOM 7 C4' G A 8 2.862 -10.369 8.500 1.00 49.23 C
ATOM 8 O4' G A 8 3.532 -10.470 7.220 1.00 48.74 O
ATOM 9 C3' G A 8 3.888 -10.919 9.459 1.00 50.38 C
ATOM 10 O3' G A 8 3.295 -11.221 10.719 1.00 53.66 O
ATOM 11 C2' G A 8 4.370 -12.141 8.678 1.00 50.07 C
ATOM 12 O2' G A 8 3.512 -13.267 8.695 1.00 50.29 O
ATOM 13 C1' G A 8 4.427 -11.576 7.261 1.00 49.05 C
ATOM 14 N9 G A 8 5.784 -11.146 6.927 1.00 47.90 N
ATOM 15 C8 G A 8 6.185 -9.845 6.783 1.00 45.89 C
ATOM 16 N7 G A 8 7.436 -9.744 6.484 1.00 45.89 N
ATOM 17 C5 G A 8 7.913 -11.054 6.440 1.00 46.90 C
ATOM 18 C6 G A 8 9.221 -11.549 6.173 1.00 48.05 C
ATOM 19 O6 G A 8 10.257 -10.913 5.903 1.00 49.14 O
ATOM 20 N1 G A 8 9.297 -12.940 6.230 1.00 47.96 N
ATOM 21 C2 G A 8 8.242 -13.760 6.500 1.00 47.30 C
ATOM 22 N2 G A 8 8.583 -15.059 6.482 1.00 47.10 N
ATOM 23 N3 G A 8 6.996 -13.321 6.750 1.00 46.81 N
ATOM 24 C4 G A 8 6.905 -11.951 6.712 1.00 47.30 C
ATOM 25 P U A 9 3.556 -10.357 12.061 1.00 57.22 P
ATOM 26 OP1 U A 9 2.252 -9.977 12.685 1.00 55.78 O
ATOM 27 OP2 U A 9 4.513 -9.270 11.727 1.00 55.14 O
ATOM 28 O5' U A 9 4.242 -11.488 12.965 1.00 58.13 O
TER
ATOM 1 O3' G B 8 3.295 -11.221 10.719 1.00 53.66 O
ATOM 2 P U B 9 3.556 -10.357 12.061 1.00 57.22 P
ATOM 3 OP1 U B 9 2.252 -9.977 12.685 1.00 55.78 O
ATOM 4 OP2 U B 9 4.513 -9.270 11.727 1.00 55.14 O
ATOM 5 O5' U B 9 4.242 -11.488 12.965 1.00 58.13 O
ATOM 6 C5' U B 9 4.396 -12.762 12.384 1.00 62.26 C
ATOM 7 C4' U B 9 5.521 -13.502 13.057 1.00 65.64 C
ATOM 8 O4' U B 9 6.410 -12.546 13.696 1.00 67.42 O
ATOM 9 C3' U B 9 5.037 -14.431 14.169 1.00 67.98 C
ATOM 10 O3' U B 9 4.514 -15.695 13.635 1.00 68.73 O
ATOM 11 C2' U B 9 6.255 -14.465 15.138 1.00 69.04 C
ATOM 12 O2' U B 9 7.223 -15.495 15.075 1.00 68.88 O
ATOM 13 C1' U B 9 6.986 -13.154 14.835 1.00 69.35 C
ATOM 14 N1 U B 9 6.816 -12.352 16.050 1.00 71.60 N
ATOM 15 C2 U B 9 7.901 -12.213 16.872 1.00 73.15 C
ATOM 16 O2 U B 9 8.997 -12.677 16.602 1.00 73.60 O
ATOM 17 N3 U B 9 7.647 -11.487 17.999 1.00 73.95 N
ATOM 18 C4 U B 9 6.434 -10.940 18.372 1.00 74.39 C
ATOM 19 O4 U B 9 6.362 -10.318 19.419 1.00 75.62 O
ATOM 20 C5 U B 9 5.334 -11.148 17.473 1.00 73.68 C
ATOM 21 C6 U B 9 5.569 -11.844 16.366 1.00 72.66 C
ATOM 22 P G B 10 5.416 -17.003 13.361 1.00 70.71 P
ATOM 23 OP1 G B 10 5.073 -17.613 12.041 1.00 69.93 O
ATOM 24 OP2 G B 10 5.390 -17.772 14.623 1.00 69.78 O
ATOM 25 O5' G B 10 6.906 -16.430 13.211 1.00 70.96 O
TER
ATOM 2 P G A 8 3.562 -6.970 7.750 1.00 49.50 P
ATOM 3 OP1 G A 8 3.330 -5.809 8.649 1.00 48.81 O
ATOM 4 OP2 G A 8 4.812 -7.780 7.862 1.00 49.04 O
ATOM 5 O5' G A 8 2.372 -8.042 7.842 1.00 48.47 O
ATOM 6 C5' G A 8 2.448 -8.968 8.904 1.00 48.63 C
ATOM 7 C4' G A 8 2.862 -10.369 8.500 1.00 49.23 C
ATOM 8 O4' G A 8 3.532 -10.470 7.220 1.00 48.74 O
ATOM 9 C3' G A 8 3.888 -10.919 9.459 1.00 50.38 C
ATOM 10 O3' G A 8 3.295 -11.221 10.719 1.00 53.66 O
ATOM 11 C2' G A 8 4.370 -12.141 8.678 1.00 50.07 C
ATOM 12 O2' G A 8 3.512 -13.267 8.695 1.00 50.29 O
ATOM 13 C1' G A 8 4.427 -11.576 7.261 1.00 49.05 C
ATOM 14 N9 G A 8 5.784 -11.146 6.927 1.00 47.90 N
ATOM 15 C8 G A 8 6.185 -9.845 6.783 1.00 45.89 C
ATOM 16 N7 G A 8 7.436 -9.744 6.484 1.00 45.89 N
ATOM 17 C5 G A 8 7.913 -11.054 6.440 1.00 46.90 C
ATOM 18 C6 G A 8 9.221 -11.549 6.173 1.00 48.05 C
ATOM 19 O6 G A 8 10.257 -10.913 5.903 1.00 49.14 O
ATOM 20 N1 G A 8 9.297 -12.940 6.230 1.00 47.96 N
ATOM 21 C2 G A 8 8.242 -13.760 6.500 1.00 47.30 C
ATOM 22 N2 G A 8 8.583 -15.059 6.482 1.00 47.10 N
ATOM 23 N3 G A 8 6.996 -13.321 6.750 1.00 46.81 N
ATOM 24 C4 G A 8 6.905 -11.951 6.712 1.00 47.30 C
ATOM 25 P U A 9 3.556 -10.357 12.061 1.00 57.22 P
ATOM 26 OP1 U A 9 2.252 -9.977 12.685 1.00 55.78 O
ATOM 27 OP2 U A 9 4.513 -9.270 11.727 1.00 55.14 O
ATOM 28 O5' U A 9 4.242 -11.488 12.965 1.00 58.13 O
TER
ATOM 1 O3' G B 8 3.295 -11.221 10.719 1.00 53.66 O
ATOM 2 P U B 9 3.556 -10.357 12.061 1.00 57.22 P
ATOM 3 OP1 U B 9 2.252 -9.977 12.685 1.00 55.78 O
ATOM 4 OP2 U B 9 4.513 -9.270 11.727 1.00 55.14 O
ATOM 5 O5' U B 9 4.242 -11.488 12.965 1.00 58.13 O
ATOM 6 C5' U B 9 4.396 -12.762 12.384 1.00 62.26 C
ATOM 7 C4' U B 9 5.521 -13.502 13.057 1.00 65.64 C
ATOM 8 O4' U B 9 6.410 -12.546 13.696 1.00 67.42 O
ATOM 9 C3' U B 9 5.037 -14.431 14.169 1.00 67.98 C
ATOM 10 O3' U B 9 4.514 -15.695 13.635 1.00 68.73 O
ATOM 11 C2' U B 9 6.255 -14.465 15.138 1.00 69.04 C
ATOM 12 O2' U B 9 7.223 -15.495 15.075 1.00 68.88 O
ATOM 13 C1' U B 9 6.986 -13.154 14.835 1.00 69.35 C
ATOM 14 N1 U B 9 6.816 -12.352 16.050 1.00 71.60 N
ATOM 15 C2 U B 9 7.901 -12.213 16.872 1.00 73.15 C
ATOM 16 O2 U B 9 8.997 -12.677 16.602 1.00 73.60 O
ATOM 17 N3 U B 9 7.647 -11.487 17.999 1.00 73.95 N
ATOM 18 C4 U B 9 6.434 -10.940 18.372 1.00 74.39 C
ATOM 19 O4 U B 9 6.362 -10.318 19.419 1.00 75.62 O
ATOM 20 C5 U B 9 5.334 -11.148 17.473 1.00 73.68 C
ATOM 21 C6 U B 9 5.569 -11.844 16.366 1.00 72.66 C
ATOM 22 P G B 10 5.416 -17.003 13.361 1.00 70.71 P
ATOM 23 OP1 G B 10 5.073 -17.613 12.041 1.00 69.93 O
ATOM 24 OP2 G B 10 5.390 -17.772 14.623 1.00 69.78 O
ATOM 25 O5' G B 10 6.906 -16.430 13.211 1.00 70.96 O
TER
Atoms:
OP1: (3.330,-5.809,8.649)
OP2: (4.812,-7.780,7.862)
C3': (3.888,-10.919,9.459)
C1': (4.427,-11.576,7.261)
C5': (2.448,-8.968,8.904)
O6: (10.257,-10.913,5.903)
O4': (3.532,-10.470,7.220)
C8: (6.185,-9.845,6.783)
C2: (8.242,-13.760,6.500)
C6: (9.221,-11.549,6.173)
C5: (7.913,-11.054,6.440)
C4: (6.905,-11.951,6.712)
P: (3.562,-6.970,7.750)
C4': (2.862,-10.369,8.500)
C2': (4.370,-12.141,8.678)
O2': (3.512,-13.267,8.695)
N1: (9.297,-12.940,6.230)
N2: (8.583,-15.059,6.482)
N3: (6.996,-13.321,6.750)
N7: (7.436,-9.744,6.484)
N9: (5.784,-11.146,6.927)
O5': (2.372,-8.042,7.842)
O3': (3.295,-11.221,10.719)
OP2: (4.812,-7.780,7.862)
C3': (3.888,-10.919,9.459)
C1': (4.427,-11.576,7.261)
C5': (2.448,-8.968,8.904)
O6: (10.257,-10.913,5.903)
O4': (3.532,-10.470,7.220)
C8: (6.185,-9.845,6.783)
C2: (8.242,-13.760,6.500)
C6: (9.221,-11.549,6.173)
C5: (7.913,-11.054,6.440)
C4: (6.905,-11.951,6.712)
P: (3.562,-6.970,7.750)
C4': (2.862,-10.369,8.500)
C2': (4.370,-12.141,8.678)
O2': (3.512,-13.267,8.695)
N1: (9.297,-12.940,6.230)
N2: (8.583,-15.059,6.482)
N3: (6.996,-13.321,6.750)
N7: (7.436,-9.744,6.484)
N9: (5.784,-11.146,6.927)
O5': (2.372,-8.042,7.842)
O3': (3.295,-11.221,10.719)
C4: (6.434,-10.940,18.372)
N3: (7.647,-11.487,17.999)
OP1: (2.252,-9.977,12.685)
OP2: (4.513,-9.270,11.727)
C2: (7.901,-12.213,16.872)
C1': (6.986,-13.154,14.835)
C3': (5.037,-14.431,14.169)
O5': (4.242,-11.488,12.965)
O4': (6.410,-12.546,13.696)
C5': (4.396,-12.762,12.384)
P: (3.556,-10.357,12.061)
C4': (5.521,-13.502,13.057)
C2': (6.255,-14.465,15.138)
O2': (7.223,-15.495,15.075)
N1: (6.816,-12.352,16.050)
O4: (6.362,-10.318,19.419)
O2: (8.997,-12.677,16.602)
C6: (5.569,-11.844,16.366)
C5: (5.334,-11.148,17.473)
O3': (4.514,-15.695,13.635)
N3: (7.647,-11.487,17.999)
OP1: (2.252,-9.977,12.685)
OP2: (4.513,-9.270,11.727)
C2: (7.901,-12.213,16.872)
C1': (6.986,-13.154,14.835)
C3': (5.037,-14.431,14.169)
O5': (4.242,-11.488,12.965)
O4': (6.410,-12.546,13.696)
C5': (4.396,-12.762,12.384)
P: (3.556,-10.357,12.061)
C4': (5.521,-13.502,13.057)
C2': (6.255,-14.465,15.138)
O2': (7.223,-15.495,15.075)
N1: (6.816,-12.352,16.050)
O4: (6.362,-10.318,19.419)
O2: (8.997,-12.677,16.602)
C6: (5.569,-11.844,16.366)
C5: (5.334,-11.148,17.473)
O3': (4.514,-15.695,13.635)
Image (generated by PyMOL):