Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DH3:F8:F9
Extra
PDB:
ATOM 1 O3' C A 7 5.190 -35.775 35.476 1.00 46.29 O
ATOM 2 P G A 8 5.407 -35.204 34.001 1.00 44.76 P
ATOM 3 OP1 G A 8 4.882 -36.210 33.035 1.00 43.03 O
ATOM 4 OP2 G A 8 6.815 -34.775 34.025 1.00 46.34 O
ATOM 5 O5' G A 8 4.569 -33.857 34.030 1.00 45.20 O
ATOM 6 C5' G A 8 4.660 -33.009 32.973 1.00 46.77 C
ATOM 7 C4' G A 8 4.714 -31.570 33.428 1.00 48.57 C
ATOM 8 O4' G A 8 5.193 -31.424 34.772 1.00 47.83 O
ATOM 9 C3' G A 8 5.754 -30.850 32.610 1.00 50.70 C
ATOM 10 O3' G A 8 5.229 -30.530 31.325 1.00 54.78 O
ATOM 11 C2' G A 8 6.189 -29.666 33.480 1.00 49.41 C
ATOM 12 O2' G A 8 5.441 -28.485 33.356 1.00 48.20 O
ATOM 13 C1' G A 8 6.011 -30.257 34.862 1.00 48.28 C
ATOM 14 N9 G A 8 7.292 -30.610 35.482 1.00 47.43 N
ATOM 15 C8 G A 8 7.819 -31.872 35.643 1.00 46.87 C
ATOM 16 N7 G A 8 8.976 -31.877 36.251 1.00 46.46 N
ATOM 17 C5 G A 8 9.226 -30.546 36.513 1.00 46.44 C
ATOM 18 C6 G A 8 10.319 -29.962 37.157 1.00 46.83 C
ATOM 19 O6 G A 8 11.287 -30.545 37.623 1.00 49.88 O
ATOM 20 N1 G A 8 10.226 -28.588 37.229 1.00 45.92 N
ATOM 21 C2 G A 8 9.167 -27.875 36.729 1.00 46.31 C
ATOM 22 N2 G A 8 9.218 -26.543 36.881 1.00 47.06 N
ATOM 23 N3 G A 8 8.112 -28.411 36.126 1.00 46.30 N
ATOM 24 C4 G A 8 8.210 -29.752 36.050 1.00 46.68 C
ATOM 25 P U A 9 5.824 -31.195 29.979 1.00 56.70 P
ATOM 26 OP1 U A 9 4.637 -31.777 29.287 1.00 56.70 O
ATOM 27 OP2 U A 9 6.935 -32.111 30.289 1.00 55.28 O
ATOM 28 O5' U A 9 6.407 -29.884 29.241 1.00 58.02 O
TER
ATOM 1 O3' G B 8 5.229 -30.530 31.325 1.00 54.78 O
ATOM 2 P U B 9 5.824 -31.195 29.979 1.00 56.70 P
ATOM 3 OP1 U B 9 4.637 -31.777 29.287 1.00 56.70 O
ATOM 4 OP2 U B 9 6.935 -32.111 30.289 1.00 55.28 O
ATOM 5 O5' U B 9 6.407 -29.884 29.241 1.00 58.02 O
ATOM 6 C5' U B 9 6.566 -28.722 30.025 1.00 61.99 C
ATOM 7 C4' U B 9 7.738 -27.875 29.597 1.00 65.42 C
ATOM 8 O4' U B 9 8.911 -28.653 29.198 1.00 67.77 O
ATOM 9 C3' U B 9 7.334 -27.036 28.406 1.00 67.33 C
ATOM 10 O3' U B 9 6.615 -25.865 28.889 1.00 67.48 O
ATOM 11 C2' U B 9 8.667 -26.896 27.607 1.00 68.67 C
ATOM 12 O2' U B 9 9.361 -25.663 27.642 1.00 68.89 O
ATOM 13 C1' U B 9 9.602 -27.990 28.154 1.00 69.40 C
ATOM 14 N1 U B 9 9.969 -28.970 27.056 1.00 72.07 N
ATOM 15 C2 U B 9 11.275 -29.038 26.559 1.00 73.46 C
ATOM 16 O2 U B 9 12.212 -28.361 26.978 1.00 73.87 O
ATOM 17 N3 U B 9 11.444 -29.959 25.542 1.00 73.64 N
ATOM 18 C4 U B 9 10.471 -30.785 24.993 1.00 73.83 C
ATOM 19 O4 U B 9 10.778 -31.560 24.099 1.00 73.84 O
ATOM 20 C5 U B 9 9.143 -30.655 25.550 1.00 73.36 C
ATOM 21 C6 U B 9 8.952 -29.767 26.534 1.00 72.66 C
ATOM 22 P G B 10 7.368 -24.589 29.495 1.00 68.20 P
ATOM 23 OP1 G B 10 6.950 -24.378 30.902 1.00 68.05 O
ATOM 24 OP2 G B 10 7.152 -23.515 28.498 1.00 68.52 O
ATOM 25 O5' G B 10 8.924 -25.060 29.437 1.00 69.92 O
TER
ATOM 2 P G A 8 5.407 -35.204 34.001 1.00 44.76 P
ATOM 3 OP1 G A 8 4.882 -36.210 33.035 1.00 43.03 O
ATOM 4 OP2 G A 8 6.815 -34.775 34.025 1.00 46.34 O
ATOM 5 O5' G A 8 4.569 -33.857 34.030 1.00 45.20 O
ATOM 6 C5' G A 8 4.660 -33.009 32.973 1.00 46.77 C
ATOM 7 C4' G A 8 4.714 -31.570 33.428 1.00 48.57 C
ATOM 8 O4' G A 8 5.193 -31.424 34.772 1.00 47.83 O
ATOM 9 C3' G A 8 5.754 -30.850 32.610 1.00 50.70 C
ATOM 10 O3' G A 8 5.229 -30.530 31.325 1.00 54.78 O
ATOM 11 C2' G A 8 6.189 -29.666 33.480 1.00 49.41 C
ATOM 12 O2' G A 8 5.441 -28.485 33.356 1.00 48.20 O
ATOM 13 C1' G A 8 6.011 -30.257 34.862 1.00 48.28 C
ATOM 14 N9 G A 8 7.292 -30.610 35.482 1.00 47.43 N
ATOM 15 C8 G A 8 7.819 -31.872 35.643 1.00 46.87 C
ATOM 16 N7 G A 8 8.976 -31.877 36.251 1.00 46.46 N
ATOM 17 C5 G A 8 9.226 -30.546 36.513 1.00 46.44 C
ATOM 18 C6 G A 8 10.319 -29.962 37.157 1.00 46.83 C
ATOM 19 O6 G A 8 11.287 -30.545 37.623 1.00 49.88 O
ATOM 20 N1 G A 8 10.226 -28.588 37.229 1.00 45.92 N
ATOM 21 C2 G A 8 9.167 -27.875 36.729 1.00 46.31 C
ATOM 22 N2 G A 8 9.218 -26.543 36.881 1.00 47.06 N
ATOM 23 N3 G A 8 8.112 -28.411 36.126 1.00 46.30 N
ATOM 24 C4 G A 8 8.210 -29.752 36.050 1.00 46.68 C
ATOM 25 P U A 9 5.824 -31.195 29.979 1.00 56.70 P
ATOM 26 OP1 U A 9 4.637 -31.777 29.287 1.00 56.70 O
ATOM 27 OP2 U A 9 6.935 -32.111 30.289 1.00 55.28 O
ATOM 28 O5' U A 9 6.407 -29.884 29.241 1.00 58.02 O
TER
ATOM 1 O3' G B 8 5.229 -30.530 31.325 1.00 54.78 O
ATOM 2 P U B 9 5.824 -31.195 29.979 1.00 56.70 P
ATOM 3 OP1 U B 9 4.637 -31.777 29.287 1.00 56.70 O
ATOM 4 OP2 U B 9 6.935 -32.111 30.289 1.00 55.28 O
ATOM 5 O5' U B 9 6.407 -29.884 29.241 1.00 58.02 O
ATOM 6 C5' U B 9 6.566 -28.722 30.025 1.00 61.99 C
ATOM 7 C4' U B 9 7.738 -27.875 29.597 1.00 65.42 C
ATOM 8 O4' U B 9 8.911 -28.653 29.198 1.00 67.77 O
ATOM 9 C3' U B 9 7.334 -27.036 28.406 1.00 67.33 C
ATOM 10 O3' U B 9 6.615 -25.865 28.889 1.00 67.48 O
ATOM 11 C2' U B 9 8.667 -26.896 27.607 1.00 68.67 C
ATOM 12 O2' U B 9 9.361 -25.663 27.642 1.00 68.89 O
ATOM 13 C1' U B 9 9.602 -27.990 28.154 1.00 69.40 C
ATOM 14 N1 U B 9 9.969 -28.970 27.056 1.00 72.07 N
ATOM 15 C2 U B 9 11.275 -29.038 26.559 1.00 73.46 C
ATOM 16 O2 U B 9 12.212 -28.361 26.978 1.00 73.87 O
ATOM 17 N3 U B 9 11.444 -29.959 25.542 1.00 73.64 N
ATOM 18 C4 U B 9 10.471 -30.785 24.993 1.00 73.83 C
ATOM 19 O4 U B 9 10.778 -31.560 24.099 1.00 73.84 O
ATOM 20 C5 U B 9 9.143 -30.655 25.550 1.00 73.36 C
ATOM 21 C6 U B 9 8.952 -29.767 26.534 1.00 72.66 C
ATOM 22 P G B 10 7.368 -24.589 29.495 1.00 68.20 P
ATOM 23 OP1 G B 10 6.950 -24.378 30.902 1.00 68.05 O
ATOM 24 OP2 G B 10 7.152 -23.515 28.498 1.00 68.52 O
ATOM 25 O5' G B 10 8.924 -25.060 29.437 1.00 69.92 O
TER
Atoms:
OP1: (4.882,-36.210,33.035)
OP2: (6.815,-34.775,34.025)
C3': (5.754,-30.850,32.610)
C1': (6.011,-30.257,34.862)
C5': (4.660,-33.009,32.973)
O6: (11.287,-30.545,37.623)
O4': (5.193,-31.424,34.772)
C8: (7.819,-31.872,35.643)
C2: (9.167,-27.875,36.729)
C6: (10.319,-29.962,37.157)
C5: (9.226,-30.546,36.513)
C4: (8.210,-29.752,36.050)
P: (5.407,-35.204,34.001)
C4': (4.714,-31.570,33.428)
C2': (6.189,-29.666,33.480)
O2': (5.441,-28.485,33.356)
N1: (10.226,-28.588,37.229)
N2: (9.218,-26.543,36.881)
N3: (8.112,-28.411,36.126)
N7: (8.976,-31.877,36.251)
N9: (7.292,-30.610,35.482)
O5': (4.569,-33.857,34.030)
O3': (5.229,-30.530,31.325)
OP2: (6.815,-34.775,34.025)
C3': (5.754,-30.850,32.610)
C1': (6.011,-30.257,34.862)
C5': (4.660,-33.009,32.973)
O6: (11.287,-30.545,37.623)
O4': (5.193,-31.424,34.772)
C8: (7.819,-31.872,35.643)
C2: (9.167,-27.875,36.729)
C6: (10.319,-29.962,37.157)
C5: (9.226,-30.546,36.513)
C4: (8.210,-29.752,36.050)
P: (5.407,-35.204,34.001)
C4': (4.714,-31.570,33.428)
C2': (6.189,-29.666,33.480)
O2': (5.441,-28.485,33.356)
N1: (10.226,-28.588,37.229)
N2: (9.218,-26.543,36.881)
N3: (8.112,-28.411,36.126)
N7: (8.976,-31.877,36.251)
N9: (7.292,-30.610,35.482)
O5': (4.569,-33.857,34.030)
O3': (5.229,-30.530,31.325)
C4: (10.471,-30.785,24.993)
N3: (11.444,-29.959,25.542)
OP1: (4.637,-31.777,29.287)
OP2: (6.935,-32.111,30.289)
C2: (11.275,-29.038,26.559)
C1': (9.602,-27.990,28.154)
C3': (7.334,-27.036,28.406)
O5': (6.407,-29.884,29.241)
O4': (8.911,-28.653,29.198)
C5': (6.566,-28.722,30.025)
P: (5.824,-31.195,29.979)
C4': (7.738,-27.875,29.597)
C2': (8.667,-26.896,27.607)
O2': (9.361,-25.663,27.642)
N1: (9.969,-28.970,27.056)
O4: (10.778,-31.560,24.099)
O2: (12.212,-28.361,26.978)
C6: (8.952,-29.767,26.534)
C5: (9.143,-30.655,25.550)
O3': (6.615,-25.865,28.889)
N3: (11.444,-29.959,25.542)
OP1: (4.637,-31.777,29.287)
OP2: (6.935,-32.111,30.289)
C2: (11.275,-29.038,26.559)
C1': (9.602,-27.990,28.154)
C3': (7.334,-27.036,28.406)
O5': (6.407,-29.884,29.241)
O4': (8.911,-28.653,29.198)
C5': (6.566,-28.722,30.025)
P: (5.824,-31.195,29.979)
C4': (7.738,-27.875,29.597)
C2': (8.667,-26.896,27.607)
O2': (9.361,-25.663,27.642)
N1: (9.969,-28.970,27.056)
O4: (10.778,-31.560,24.099)
O2: (12.212,-28.361,26.978)
C6: (8.952,-29.767,26.534)
C5: (9.143,-30.655,25.550)
O3': (6.615,-25.865,28.889)
Image (generated by PyMOL):