Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2883:2898
Extra
PDB:
ATOM 1 O3' A A 882 -36.314 -38.128 109.159 1.00133.43 O
ATOM 2 P G A 883 -37.678 -37.576 108.514 1.00121.23 P
ATOM 3 OP1 G A 883 -38.455 -36.963 109.610 1.00121.21 O
ATOM 4 OP2 G A 883 -38.279 -38.692 107.743 1.00122.07 O
ATOM 5 O5' G A 883 -37.174 -36.444 107.521 1.00119.32 O
ATOM 6 C5' G A 883 -36.521 -35.293 108.019 1.00118.31 C
ATOM 7 C4' G A 883 -35.894 -34.490 106.919 1.00116.76 C
ATOM 8 O4' G A 883 -34.994 -35.310 106.150 1.00117.27 O
ATOM 9 C3' G A 883 -36.839 -33.931 105.879 1.00115.52 C
ATOM 10 O3' G A 883 -37.507 -32.768 106.337 1.00114.51 O
ATOM 11 C2' G A 883 -35.914 -33.661 104.694 1.00114.58 C
ATOM 12 O2' G A 883 -35.343 -32.369 104.807 1.00113.24 O
ATOM 13 C1' G A 883 -34.801 -34.704 104.896 1.00115.88 C
ATOM 14 N9 G A 883 -34.750 -35.736 103.830 1.00116.47 N
ATOM 15 C8 G A 883 -34.070 -35.569 102.634 1.00115.69 C
ATOM 16 N7 G A 883 -34.130 -36.585 101.818 1.00116.43 N
ATOM 17 C5 G A 883 -34.898 -37.499 102.524 1.00117.81 C
ATOM 18 C6 G A 883 -35.303 -38.811 102.151 1.00119.15 C
ATOM 19 O6 G A 883 -35.048 -39.389 101.087 1.00119.31 O
ATOM 20 N1 G A 883 -36.096 -39.437 103.130 1.00120.37 N
ATOM 21 C2 G A 883 -36.430 -38.866 104.344 1.00120.33 C
ATOM 22 N2 G A 883 -37.183 -39.617 105.172 1.00121.67 N
ATOM 23 N3 G A 883 -36.045 -37.629 104.701 1.00119.08 N
ATOM 24 C4 G A 883 -35.289 -37.003 103.762 1.00117.87 C
ATOM 25 P G A 884 -39.065 -32.531 106.003 1.00123.62 P
ATOM 26 OP1 G A 884 -39.474 -31.287 106.704 1.00122.70 O
ATOM 27 OP2 G A 884 -39.781 -33.800 106.318 1.00125.21 O
ATOM 28 O5' G A 884 -39.058 -32.284 104.428 1.00122.48 O
TER
ATOM 1 O3' A B 897 -28.783 -34.980 112.124 1.00136.75 O
ATOM 2 P U B 898 -29.810 -34.056 112.952 1.00133.84 P
ATOM 3 OP1 U B 898 -29.984 -32.800 112.176 1.00131.87 O
ATOM 4 OP2 U B 898 -29.302 -33.965 114.348 1.00134.80 O
ATOM 5 O5' U B 898 -31.164 -34.910 112.910 1.00134.63 O
ATOM 6 C5' U B 898 -32.049 -34.810 111.802 1.00133.67 C
ATOM 7 C4' U B 898 -33.089 -35.906 111.797 1.00134.84 C
ATOM 8 O4' U B 898 -32.460 -37.198 111.593 1.00136.26 O
ATOM 9 C3' U B 898 -33.890 -36.098 113.075 1.00135.90 C
ATOM 10 O3' U B 898 -34.915 -35.143 113.241 1.00134.86 O
ATOM 11 C2' U B 898 -34.416 -37.511 112.902 1.00137.39 C
ATOM 12 O2' U B 898 -35.490 -37.527 111.975 1.00136.72 O
ATOM 13 C1' U B 898 -33.207 -38.198 112.262 1.00137.84 C
ATOM 14 N1 U B 898 -32.343 -38.834 113.285 1.00139.39 N
ATOM 15 C2 U B 898 -32.656 -40.126 113.674 1.00141.21 C
ATOM 16 O2 U B 898 -33.576 -40.763 113.192 1.00141.57 O
ATOM 17 N3 U B 898 -31.838 -40.655 114.642 1.00142.65 N
ATOM 18 C4 U B 898 -30.765 -40.041 115.267 1.00142.47 C
ATOM 19 O4 U B 898 -30.118 -40.660 116.126 1.00143.97 O
ATOM 20 C5 U B 898 -30.510 -38.700 114.816 1.00140.53 C
ATOM 21 C6 U B 898 -31.294 -38.158 113.876 1.00139.11 C
ATOM 22 P U B 899 -35.321 -34.648 114.712 1.00134.84 P
ATOM 23 OP1 U B 899 -36.584 -33.865 114.577 1.00133.83 O
ATOM 24 OP2 U B 899 -34.122 -33.983 115.291 1.00134.58 O
ATOM 25 O5' U B 899 -35.613 -36.014 115.481 1.00136.97 O
TER
ATOM 2 P G A 883 -37.678 -37.576 108.514 1.00121.23 P
ATOM 3 OP1 G A 883 -38.455 -36.963 109.610 1.00121.21 O
ATOM 4 OP2 G A 883 -38.279 -38.692 107.743 1.00122.07 O
ATOM 5 O5' G A 883 -37.174 -36.444 107.521 1.00119.32 O
ATOM 6 C5' G A 883 -36.521 -35.293 108.019 1.00118.31 C
ATOM 7 C4' G A 883 -35.894 -34.490 106.919 1.00116.76 C
ATOM 8 O4' G A 883 -34.994 -35.310 106.150 1.00117.27 O
ATOM 9 C3' G A 883 -36.839 -33.931 105.879 1.00115.52 C
ATOM 10 O3' G A 883 -37.507 -32.768 106.337 1.00114.51 O
ATOM 11 C2' G A 883 -35.914 -33.661 104.694 1.00114.58 C
ATOM 12 O2' G A 883 -35.343 -32.369 104.807 1.00113.24 O
ATOM 13 C1' G A 883 -34.801 -34.704 104.896 1.00115.88 C
ATOM 14 N9 G A 883 -34.750 -35.736 103.830 1.00116.47 N
ATOM 15 C8 G A 883 -34.070 -35.569 102.634 1.00115.69 C
ATOM 16 N7 G A 883 -34.130 -36.585 101.818 1.00116.43 N
ATOM 17 C5 G A 883 -34.898 -37.499 102.524 1.00117.81 C
ATOM 18 C6 G A 883 -35.303 -38.811 102.151 1.00119.15 C
ATOM 19 O6 G A 883 -35.048 -39.389 101.087 1.00119.31 O
ATOM 20 N1 G A 883 -36.096 -39.437 103.130 1.00120.37 N
ATOM 21 C2 G A 883 -36.430 -38.866 104.344 1.00120.33 C
ATOM 22 N2 G A 883 -37.183 -39.617 105.172 1.00121.67 N
ATOM 23 N3 G A 883 -36.045 -37.629 104.701 1.00119.08 N
ATOM 24 C4 G A 883 -35.289 -37.003 103.762 1.00117.87 C
ATOM 25 P G A 884 -39.065 -32.531 106.003 1.00123.62 P
ATOM 26 OP1 G A 884 -39.474 -31.287 106.704 1.00122.70 O
ATOM 27 OP2 G A 884 -39.781 -33.800 106.318 1.00125.21 O
ATOM 28 O5' G A 884 -39.058 -32.284 104.428 1.00122.48 O
TER
ATOM 1 O3' A B 897 -28.783 -34.980 112.124 1.00136.75 O
ATOM 2 P U B 898 -29.810 -34.056 112.952 1.00133.84 P
ATOM 3 OP1 U B 898 -29.984 -32.800 112.176 1.00131.87 O
ATOM 4 OP2 U B 898 -29.302 -33.965 114.348 1.00134.80 O
ATOM 5 O5' U B 898 -31.164 -34.910 112.910 1.00134.63 O
ATOM 6 C5' U B 898 -32.049 -34.810 111.802 1.00133.67 C
ATOM 7 C4' U B 898 -33.089 -35.906 111.797 1.00134.84 C
ATOM 8 O4' U B 898 -32.460 -37.198 111.593 1.00136.26 O
ATOM 9 C3' U B 898 -33.890 -36.098 113.075 1.00135.90 C
ATOM 10 O3' U B 898 -34.915 -35.143 113.241 1.00134.86 O
ATOM 11 C2' U B 898 -34.416 -37.511 112.902 1.00137.39 C
ATOM 12 O2' U B 898 -35.490 -37.527 111.975 1.00136.72 O
ATOM 13 C1' U B 898 -33.207 -38.198 112.262 1.00137.84 C
ATOM 14 N1 U B 898 -32.343 -38.834 113.285 1.00139.39 N
ATOM 15 C2 U B 898 -32.656 -40.126 113.674 1.00141.21 C
ATOM 16 O2 U B 898 -33.576 -40.763 113.192 1.00141.57 O
ATOM 17 N3 U B 898 -31.838 -40.655 114.642 1.00142.65 N
ATOM 18 C4 U B 898 -30.765 -40.041 115.267 1.00142.47 C
ATOM 19 O4 U B 898 -30.118 -40.660 116.126 1.00143.97 O
ATOM 20 C5 U B 898 -30.510 -38.700 114.816 1.00140.53 C
ATOM 21 C6 U B 898 -31.294 -38.158 113.876 1.00139.11 C
ATOM 22 P U B 899 -35.321 -34.648 114.712 1.00134.84 P
ATOM 23 OP1 U B 899 -36.584 -33.865 114.577 1.00133.83 O
ATOM 24 OP2 U B 899 -34.122 -33.983 115.291 1.00134.58 O
ATOM 25 O5' U B 899 -35.613 -36.014 115.481 1.00136.97 O
TER
Atoms:
OP1: (-38.455,-36.963,109.610)
OP2: (-38.279,-38.692,107.743)
C3': (-36.839,-33.931,105.879)
C1': (-34.801,-34.704,104.896)
C5': (-36.521,-35.293,108.019)
O6: (-35.048,-39.389,101.087)
O4': (-34.994,-35.310,106.150)
C8: (-34.070,-35.569,102.634)
C2: (-36.430,-38.866,104.344)
C6: (-35.303,-38.811,102.151)
C5: (-34.898,-37.499,102.524)
C4: (-35.289,-37.003,103.762)
P: (-37.678,-37.576,108.514)
C4': (-35.894,-34.490,106.919)
C2': (-35.914,-33.661,104.694)
O2': (-35.343,-32.369,104.807)
N1: (-36.096,-39.437,103.130)
N2: (-37.183,-39.617,105.172)
N3: (-36.045,-37.629,104.701)
N7: (-34.130,-36.585,101.818)
N9: (-34.750,-35.736,103.830)
O5': (-37.174,-36.444,107.521)
O3': (-37.507,-32.768,106.337)
OP2: (-38.279,-38.692,107.743)
C3': (-36.839,-33.931,105.879)
C1': (-34.801,-34.704,104.896)
C5': (-36.521,-35.293,108.019)
O6: (-35.048,-39.389,101.087)
O4': (-34.994,-35.310,106.150)
C8: (-34.070,-35.569,102.634)
C2: (-36.430,-38.866,104.344)
C6: (-35.303,-38.811,102.151)
C5: (-34.898,-37.499,102.524)
C4: (-35.289,-37.003,103.762)
P: (-37.678,-37.576,108.514)
C4': (-35.894,-34.490,106.919)
C2': (-35.914,-33.661,104.694)
O2': (-35.343,-32.369,104.807)
N1: (-36.096,-39.437,103.130)
N2: (-37.183,-39.617,105.172)
N3: (-36.045,-37.629,104.701)
N7: (-34.130,-36.585,101.818)
N9: (-34.750,-35.736,103.830)
O5': (-37.174,-36.444,107.521)
O3': (-37.507,-32.768,106.337)
C4: (-30.765,-40.041,115.267)
N3: (-31.838,-40.655,114.642)
OP1: (-29.984,-32.800,112.176)
OP2: (-29.302,-33.965,114.348)
C2: (-32.656,-40.126,113.674)
C1': (-33.207,-38.198,112.262)
C3': (-33.890,-36.098,113.075)
O5': (-31.164,-34.910,112.910)
O4': (-32.460,-37.198,111.593)
C5': (-32.049,-34.810,111.802)
P: (-29.810,-34.056,112.952)
C4': (-33.089,-35.906,111.797)
C2': (-34.416,-37.511,112.902)
O2': (-35.490,-37.527,111.975)
N1: (-32.343,-38.834,113.285)
O4: (-30.118,-40.660,116.126)
O2: (-33.576,-40.763,113.192)
C6: (-31.294,-38.158,113.876)
C5: (-30.510,-38.700,114.816)
O3': (-34.915,-35.143,113.241)
N3: (-31.838,-40.655,114.642)
OP1: (-29.984,-32.800,112.176)
OP2: (-29.302,-33.965,114.348)
C2: (-32.656,-40.126,113.674)
C1': (-33.207,-38.198,112.262)
C3': (-33.890,-36.098,113.075)
O5': (-31.164,-34.910,112.910)
O4': (-32.460,-37.198,111.593)
C5': (-32.049,-34.810,111.802)
P: (-29.810,-34.056,112.952)
C4': (-33.089,-35.906,111.797)
C2': (-34.416,-37.511,112.902)
O2': (-35.490,-37.527,111.975)
N1: (-32.343,-38.834,113.285)
O4: (-30.118,-40.660,116.126)
O2: (-33.576,-40.763,113.192)
C6: (-31.294,-38.158,113.876)
C5: (-30.510,-38.700,114.816)
O3': (-34.915,-35.143,113.241)
Image (generated by PyMOL):