Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A428:A409
Extra
PDB:
ATOM 1 O3' U A 427 -109.793 36.410 -77.019 1.00 54.88 O
ATOM 2 P A A 428 -109.264 35.166 -76.121 1.00 36.97 P
ATOM 3 OP1 A A 428 -108.952 35.685 -74.760 1.00 36.97 O
ATOM 4 OP2 A A 428 -108.187 34.523 -76.894 1.00 36.97 O
ATOM 5 O5' A A 428 -110.512 34.189 -76.057 1.00 36.97 O
ATOM 6 C5' A A 428 -110.562 33.046 -76.884 1.00 36.97 C
ATOM 7 C4' A A 428 -110.741 31.800 -76.077 1.00 36.97 C
ATOM 8 O4' A A 428 -111.569 32.081 -74.930 1.00 36.97 O
ATOM 9 C3' A A 428 -111.465 30.662 -76.775 1.00 36.97 C
ATOM 10 O3' A A 428 -110.639 29.927 -77.647 1.00 36.97 O
ATOM 11 C2' A A 428 -111.989 29.848 -75.614 1.00 36.97 C
ATOM 12 O2' A A 428 -110.956 29.069 -75.037 1.00 36.97 O
ATOM 13 C1' A A 428 -112.371 30.949 -74.642 1.00 36.97 C
ATOM 14 N9 A A 428 -113.776 31.319 -74.797 1.00 37.54 N
ATOM 15 C8 A A 428 -114.328 32.566 -74.874 1.00 37.54 C
ATOM 16 N7 A A 428 -115.631 32.539 -75.006 1.00 37.54 N
ATOM 17 C5 A A 428 -115.934 31.191 -75.029 1.00 37.54 C
ATOM 18 C6 A A 428 -117.162 30.541 -75.151 1.00 37.54 C
ATOM 19 N6 A A 428 -118.318 31.216 -75.276 1.00 37.54 N
ATOM 20 N1 A A 428 -117.126 29.187 -75.138 1.00 37.54 N
ATOM 21 C2 A A 428 -115.929 28.578 -75.007 1.00 37.54 C
ATOM 22 N3 A A 428 -114.706 29.094 -74.887 1.00 37.54 N
ATOM 23 C4 A A 428 -114.795 30.423 -74.908 1.00 37.54 C
ATOM 24 P A A 429 -111.017 29.830 -79.190 1.00 43.97 P
ATOM 25 OP1 A A 429 -109.857 29.214 -79.887 1.00 43.97 O
ATOM 26 OP2 A A 429 -111.447 31.174 -79.593 1.00 43.97 O
ATOM 27 O5' A A 429 -112.264 28.829 -79.191 1.00 43.97 O
TER
ATOM 1 O3' G B 408 -118.278 38.203 -81.810 1.00 37.29 O
ATOM 2 P A B 409 -118.563 39.775 -81.875 1.00 62.47 P
ATOM 3 OP1 A B 409 -118.316 40.207 -83.259 1.00 62.47 O
ATOM 4 OP2 A B 409 -117.810 40.422 -80.780 1.00 62.47 O
ATOM 5 O5' A B 409 -120.108 39.818 -81.569 1.00 62.47 O
ATOM 6 C5' A B 409 -120.942 38.747 -81.998 1.00 62.47 C
ATOM 7 C4' A B 409 -121.786 38.238 -80.875 1.00 62.47 C
ATOM 8 O4' A B 409 -120.971 37.390 -80.015 1.00 62.47 O
ATOM 9 C3' A B 409 -122.347 39.331 -79.970 1.00 62.47 C
ATOM 10 O3' A B 409 -123.602 38.895 -79.431 1.00 62.47 O
ATOM 11 C2' A B 409 -121.293 39.388 -78.870 1.00 62.47 C
ATOM 12 O2' A B 409 -121.706 39.999 -77.669 1.00 62.47 O
ATOM 13 C1' A B 409 -121.016 37.903 -78.696 1.00 62.47 C
ATOM 14 N9 A B 409 -119.761 37.582 -78.005 1.00 63.36 N
ATOM 15 C8 A B 409 -118.655 38.375 -77.804 1.00 63.36 C
ATOM 16 N7 A B 409 -117.692 37.792 -77.119 1.00 63.36 N
ATOM 17 C5 A B 409 -118.208 36.539 -76.835 1.00 63.36 C
ATOM 18 C6 A B 409 -117.672 35.454 -76.135 1.00 63.36 C
ATOM 19 N6 A B 409 -116.455 35.504 -75.595 1.00 63.36 N
ATOM 20 N1 A B 409 -118.420 34.330 -76.018 1.00 63.36 N
ATOM 21 C2 A B 409 -119.637 34.325 -76.580 1.00 63.36 C
ATOM 22 N3 A B 409 -120.258 35.292 -77.258 1.00 63.36 N
ATOM 23 C4 A B 409 -119.480 36.391 -77.358 1.00 63.36 C
ATOM 24 P A B 410 -124.952 39.008 -80.308 1.00115.25 P
ATOM 25 OP1 A B 410 -125.780 37.809 -80.012 1.00115.25 O
ATOM 26 OP2 A B 410 -124.541 39.251 -81.710 1.00115.25 O
ATOM 27 O5' A B 410 -125.645 40.317 -79.710 1.00115.25 O
TER
ATOM 2 P A A 428 -109.264 35.166 -76.121 1.00 36.97 P
ATOM 3 OP1 A A 428 -108.952 35.685 -74.760 1.00 36.97 O
ATOM 4 OP2 A A 428 -108.187 34.523 -76.894 1.00 36.97 O
ATOM 5 O5' A A 428 -110.512 34.189 -76.057 1.00 36.97 O
ATOM 6 C5' A A 428 -110.562 33.046 -76.884 1.00 36.97 C
ATOM 7 C4' A A 428 -110.741 31.800 -76.077 1.00 36.97 C
ATOM 8 O4' A A 428 -111.569 32.081 -74.930 1.00 36.97 O
ATOM 9 C3' A A 428 -111.465 30.662 -76.775 1.00 36.97 C
ATOM 10 O3' A A 428 -110.639 29.927 -77.647 1.00 36.97 O
ATOM 11 C2' A A 428 -111.989 29.848 -75.614 1.00 36.97 C
ATOM 12 O2' A A 428 -110.956 29.069 -75.037 1.00 36.97 O
ATOM 13 C1' A A 428 -112.371 30.949 -74.642 1.00 36.97 C
ATOM 14 N9 A A 428 -113.776 31.319 -74.797 1.00 37.54 N
ATOM 15 C8 A A 428 -114.328 32.566 -74.874 1.00 37.54 C
ATOM 16 N7 A A 428 -115.631 32.539 -75.006 1.00 37.54 N
ATOM 17 C5 A A 428 -115.934 31.191 -75.029 1.00 37.54 C
ATOM 18 C6 A A 428 -117.162 30.541 -75.151 1.00 37.54 C
ATOM 19 N6 A A 428 -118.318 31.216 -75.276 1.00 37.54 N
ATOM 20 N1 A A 428 -117.126 29.187 -75.138 1.00 37.54 N
ATOM 21 C2 A A 428 -115.929 28.578 -75.007 1.00 37.54 C
ATOM 22 N3 A A 428 -114.706 29.094 -74.887 1.00 37.54 N
ATOM 23 C4 A A 428 -114.795 30.423 -74.908 1.00 37.54 C
ATOM 24 P A A 429 -111.017 29.830 -79.190 1.00 43.97 P
ATOM 25 OP1 A A 429 -109.857 29.214 -79.887 1.00 43.97 O
ATOM 26 OP2 A A 429 -111.447 31.174 -79.593 1.00 43.97 O
ATOM 27 O5' A A 429 -112.264 28.829 -79.191 1.00 43.97 O
TER
ATOM 1 O3' G B 408 -118.278 38.203 -81.810 1.00 37.29 O
ATOM 2 P A B 409 -118.563 39.775 -81.875 1.00 62.47 P
ATOM 3 OP1 A B 409 -118.316 40.207 -83.259 1.00 62.47 O
ATOM 4 OP2 A B 409 -117.810 40.422 -80.780 1.00 62.47 O
ATOM 5 O5' A B 409 -120.108 39.818 -81.569 1.00 62.47 O
ATOM 6 C5' A B 409 -120.942 38.747 -81.998 1.00 62.47 C
ATOM 7 C4' A B 409 -121.786 38.238 -80.875 1.00 62.47 C
ATOM 8 O4' A B 409 -120.971 37.390 -80.015 1.00 62.47 O
ATOM 9 C3' A B 409 -122.347 39.331 -79.970 1.00 62.47 C
ATOM 10 O3' A B 409 -123.602 38.895 -79.431 1.00 62.47 O
ATOM 11 C2' A B 409 -121.293 39.388 -78.870 1.00 62.47 C
ATOM 12 O2' A B 409 -121.706 39.999 -77.669 1.00 62.47 O
ATOM 13 C1' A B 409 -121.016 37.903 -78.696 1.00 62.47 C
ATOM 14 N9 A B 409 -119.761 37.582 -78.005 1.00 63.36 N
ATOM 15 C8 A B 409 -118.655 38.375 -77.804 1.00 63.36 C
ATOM 16 N7 A B 409 -117.692 37.792 -77.119 1.00 63.36 N
ATOM 17 C5 A B 409 -118.208 36.539 -76.835 1.00 63.36 C
ATOM 18 C6 A B 409 -117.672 35.454 -76.135 1.00 63.36 C
ATOM 19 N6 A B 409 -116.455 35.504 -75.595 1.00 63.36 N
ATOM 20 N1 A B 409 -118.420 34.330 -76.018 1.00 63.36 N
ATOM 21 C2 A B 409 -119.637 34.325 -76.580 1.00 63.36 C
ATOM 22 N3 A B 409 -120.258 35.292 -77.258 1.00 63.36 N
ATOM 23 C4 A B 409 -119.480 36.391 -77.358 1.00 63.36 C
ATOM 24 P A B 410 -124.952 39.008 -80.308 1.00115.25 P
ATOM 25 OP1 A B 410 -125.780 37.809 -80.012 1.00115.25 O
ATOM 26 OP2 A B 410 -124.541 39.251 -81.710 1.00115.25 O
ATOM 27 O5' A B 410 -125.645 40.317 -79.710 1.00115.25 O
TER
Atoms:
OP1: (-108.952,35.685,-74.760)
OP2: (-108.187,34.523,-76.894)
C3': (-111.465,30.662,-76.775)
C1': (-112.371,30.949,-74.642)
C5': (-110.562,33.046,-76.884)
O4': (-111.569,32.081,-74.930)
C8: (-114.328,32.566,-74.874)
O2': (-110.956,29.069,-75.037)
C6: (-117.162,30.541,-75.151)
C5: (-115.934,31.191,-75.029)
C4: (-114.795,30.423,-74.908)
P: (-109.264,35.166,-76.121)
C4': (-110.741,31.800,-76.077)
C2': (-111.989,29.848,-75.614)
C2: (-115.929,28.578,-75.007)
N1: (-117.126,29.187,-75.138)
N3: (-114.706,29.094,-74.887)
N6: (-118.318,31.216,-75.276)
N7: (-115.631,32.539,-75.006)
N9: (-113.776,31.319,-74.797)
O5': (-110.512,34.189,-76.057)
O3': (-110.639,29.927,-77.647)
OP2: (-108.187,34.523,-76.894)
C3': (-111.465,30.662,-76.775)
C1': (-112.371,30.949,-74.642)
C5': (-110.562,33.046,-76.884)
O4': (-111.569,32.081,-74.930)
C8: (-114.328,32.566,-74.874)
O2': (-110.956,29.069,-75.037)
C6: (-117.162,30.541,-75.151)
C5: (-115.934,31.191,-75.029)
C4: (-114.795,30.423,-74.908)
P: (-109.264,35.166,-76.121)
C4': (-110.741,31.800,-76.077)
C2': (-111.989,29.848,-75.614)
C2: (-115.929,28.578,-75.007)
N1: (-117.126,29.187,-75.138)
N3: (-114.706,29.094,-74.887)
N6: (-118.318,31.216,-75.276)
N7: (-115.631,32.539,-75.006)
N9: (-113.776,31.319,-74.797)
O5': (-110.512,34.189,-76.057)
O3': (-110.639,29.927,-77.647)
OP1: (-118.316,40.207,-83.259)
OP2: (-117.810,40.422,-80.780)
C3': (-122.347,39.331,-79.970)
C1': (-121.016,37.903,-78.696)
C5': (-120.942,38.747,-81.998)
O4': (-120.971,37.390,-80.015)
C8: (-118.655,38.375,-77.804)
O2': (-121.706,39.999,-77.669)
C6: (-117.672,35.454,-76.135)
C5: (-118.208,36.539,-76.835)
C4: (-119.480,36.391,-77.358)
P: (-118.563,39.775,-81.875)
C4': (-121.786,38.238,-80.875)
C2': (-121.293,39.388,-78.870)
C2: (-119.637,34.325,-76.580)
N1: (-118.420,34.330,-76.018)
N3: (-120.258,35.292,-77.258)
N6: (-116.455,35.504,-75.595)
N7: (-117.692,37.792,-77.119)
N9: (-119.761,37.582,-78.005)
O5': (-120.108,39.818,-81.569)
O3': (-123.602,38.895,-79.431)
OP2: (-117.810,40.422,-80.780)
C3': (-122.347,39.331,-79.970)
C1': (-121.016,37.903,-78.696)
C5': (-120.942,38.747,-81.998)
O4': (-120.971,37.390,-80.015)
C8: (-118.655,38.375,-77.804)
O2': (-121.706,39.999,-77.669)
C6: (-117.672,35.454,-76.135)
C5: (-118.208,36.539,-76.835)
C4: (-119.480,36.391,-77.358)
P: (-118.563,39.775,-81.875)
C4': (-121.786,38.238,-80.875)
C2': (-121.293,39.388,-78.870)
C2: (-119.637,34.325,-76.580)
N1: (-118.420,34.330,-76.018)
N3: (-120.258,35.292,-77.258)
N6: (-116.455,35.504,-75.595)
N7: (-117.692,37.792,-77.119)
N9: (-119.761,37.582,-78.005)
O5': (-120.108,39.818,-81.569)
O3': (-123.602,38.895,-79.431)
Image (generated by PyMOL):