Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:02041:02453
Extra
PDB:
ATOM 1 O3' G A2040 52.065 127.839 105.880 1.00 28.37 O
ATOM 2 P A A2041 52.575 127.756 104.355 1.00 28.46 P
ATOM 3 OP1 A A2041 53.032 126.361 104.154 1.00 26.57 O
ATOM 4 OP2 A A2041 53.513 128.878 104.103 1.00 29.49 O
ATOM 5 O5' A A2041 51.265 128.014 103.489 1.00 25.41 O
ATOM 6 C5' A A2041 50.124 127.160 103.632 1.00 28.29 C
ATOM 7 C4' A A2041 48.925 127.736 102.915 1.00 29.87 C
ATOM 8 O4' A A2041 48.685 129.086 103.382 1.00 30.67 O
ATOM 9 C3' A A2041 49.002 127.894 101.404 1.00 29.27 C
ATOM 10 O3' A A2041 48.699 126.675 100.742 1.00 29.01 O
ATOM 11 C2' A A2041 47.884 128.892 101.154 1.00 31.32 C
ATOM 12 O2' A A2041 46.618 128.263 101.223 1.00 34.79 O
ATOM 13 C1' A A2041 48.033 129.824 102.361 1.00 31.86 C
ATOM 14 N9 A A2041 48.805 131.037 102.079 1.00 32.43 N
ATOM 15 C8 A A2041 50.108 131.328 102.415 1.00 33.29 C
ATOM 16 N7 A A2041 50.510 132.505 102.001 1.00 32.02 N
ATOM 17 C5 A A2041 49.401 133.024 101.350 1.00 32.25 C
ATOM 18 C6 A A2041 49.183 134.237 100.687 1.00 32.63 C
ATOM 19 N6 A A2041 50.112 135.187 100.563 1.00 31.16 N
ATOM 20 N1 A A2041 47.960 134.445 100.145 1.00 33.23 N
ATOM 21 C2 A A2041 47.032 133.491 100.272 1.00 30.91 C
ATOM 22 N3 A A2041 47.118 132.311 100.871 1.00 29.93 N
ATOM 23 C4 A A2041 48.343 132.135 101.395 1.00 31.70 C
ATOM 24 P A A2042 49.521 126.247 99.435 1.00 28.93 P
ATOM 25 OP1 A A2042 49.562 127.407 98.515 1.00 30.84 O
ATOM 26 OP2 A A2042 48.954 124.969 98.960 1.00 30.11 O
ATOM 27 O5' A A2042 50.983 125.950 99.989 1.00 27.32 O
TER
ATOM 1 O3' G B2452 62.668 134.416 104.727 1.00 29.16 O
ATOM 2 P A B2453 61.166 133.951 104.395 1.00 29.31 P
ATOM 3 OP1 A B2453 60.535 133.531 105.664 1.00 26.95 O
ATOM 4 OP2 A B2453 61.219 133.000 103.267 1.00 32.41 O
ATOM 5 O5' A B2453 60.457 135.290 103.884 1.00 31.63 O
ATOM 6 C5' A B2453 61.096 136.157 102.914 1.00 31.03 C
ATOM 7 C4' A B2453 60.064 136.905 102.086 1.00 31.81 C
ATOM 8 O4' A B2453 59.169 135.955 101.452 1.00 33.62 O
ATOM 9 C3' A B2453 59.105 137.839 102.808 1.00 31.48 C
ATOM 10 O3' A B2453 59.671 139.107 103.079 1.00 33.54 O
ATOM 11 C2' A B2453 57.978 137.979 101.798 1.00 32.29 C
ATOM 12 O2' A B2453 58.290 138.851 100.731 1.00 32.44 O
ATOM 13 C1' A B2453 57.895 136.557 101.259 1.00 32.96 C
ATOM 14 N9 A B2453 56.878 135.763 101.945 1.00 32.78 N
ATOM 15 C8 A B2453 57.039 134.875 102.974 1.00 33.19 C
ATOM 16 N7 A B2453 55.928 134.287 103.342 1.00 34.63 N
ATOM 17 C5 A B2453 54.966 134.832 102.504 1.00 34.66 C
ATOM 18 C6 A B2453 53.577 134.613 102.378 1.00 34.57 C
ATOM 19 N6 A B2453 52.890 133.735 103.119 1.00 32.98 N
ATOM 20 N1 A B2453 52.913 135.330 101.448 1.00 34.12 N
ATOM 21 C2 A B2453 53.602 136.199 100.698 1.00 34.13 C
ATOM 22 N3 A B2453 54.900 136.486 100.716 1.00 33.73 N
ATOM 23 C4 A B2453 55.534 135.757 101.651 1.00 33.83 C
ATOM 24 P G B2454 59.927 139.539 104.596 1.00 34.20 P
ATOM 25 OP1 G B2454 58.628 139.445 105.300 1.00 33.46 O
ATOM 26 OP2 G B2454 60.666 140.825 104.603 1.00 33.38 O
ATOM 27 O5' G B2454 60.905 138.376 105.075 1.00 32.79 O
TER
ATOM 2 P A A2041 52.575 127.756 104.355 1.00 28.46 P
ATOM 3 OP1 A A2041 53.032 126.361 104.154 1.00 26.57 O
ATOM 4 OP2 A A2041 53.513 128.878 104.103 1.00 29.49 O
ATOM 5 O5' A A2041 51.265 128.014 103.489 1.00 25.41 O
ATOM 6 C5' A A2041 50.124 127.160 103.632 1.00 28.29 C
ATOM 7 C4' A A2041 48.925 127.736 102.915 1.00 29.87 C
ATOM 8 O4' A A2041 48.685 129.086 103.382 1.00 30.67 O
ATOM 9 C3' A A2041 49.002 127.894 101.404 1.00 29.27 C
ATOM 10 O3' A A2041 48.699 126.675 100.742 1.00 29.01 O
ATOM 11 C2' A A2041 47.884 128.892 101.154 1.00 31.32 C
ATOM 12 O2' A A2041 46.618 128.263 101.223 1.00 34.79 O
ATOM 13 C1' A A2041 48.033 129.824 102.361 1.00 31.86 C
ATOM 14 N9 A A2041 48.805 131.037 102.079 1.00 32.43 N
ATOM 15 C8 A A2041 50.108 131.328 102.415 1.00 33.29 C
ATOM 16 N7 A A2041 50.510 132.505 102.001 1.00 32.02 N
ATOM 17 C5 A A2041 49.401 133.024 101.350 1.00 32.25 C
ATOM 18 C6 A A2041 49.183 134.237 100.687 1.00 32.63 C
ATOM 19 N6 A A2041 50.112 135.187 100.563 1.00 31.16 N
ATOM 20 N1 A A2041 47.960 134.445 100.145 1.00 33.23 N
ATOM 21 C2 A A2041 47.032 133.491 100.272 1.00 30.91 C
ATOM 22 N3 A A2041 47.118 132.311 100.871 1.00 29.93 N
ATOM 23 C4 A A2041 48.343 132.135 101.395 1.00 31.70 C
ATOM 24 P A A2042 49.521 126.247 99.435 1.00 28.93 P
ATOM 25 OP1 A A2042 49.562 127.407 98.515 1.00 30.84 O
ATOM 26 OP2 A A2042 48.954 124.969 98.960 1.00 30.11 O
ATOM 27 O5' A A2042 50.983 125.950 99.989 1.00 27.32 O
TER
ATOM 1 O3' G B2452 62.668 134.416 104.727 1.00 29.16 O
ATOM 2 P A B2453 61.166 133.951 104.395 1.00 29.31 P
ATOM 3 OP1 A B2453 60.535 133.531 105.664 1.00 26.95 O
ATOM 4 OP2 A B2453 61.219 133.000 103.267 1.00 32.41 O
ATOM 5 O5' A B2453 60.457 135.290 103.884 1.00 31.63 O
ATOM 6 C5' A B2453 61.096 136.157 102.914 1.00 31.03 C
ATOM 7 C4' A B2453 60.064 136.905 102.086 1.00 31.81 C
ATOM 8 O4' A B2453 59.169 135.955 101.452 1.00 33.62 O
ATOM 9 C3' A B2453 59.105 137.839 102.808 1.00 31.48 C
ATOM 10 O3' A B2453 59.671 139.107 103.079 1.00 33.54 O
ATOM 11 C2' A B2453 57.978 137.979 101.798 1.00 32.29 C
ATOM 12 O2' A B2453 58.290 138.851 100.731 1.00 32.44 O
ATOM 13 C1' A B2453 57.895 136.557 101.259 1.00 32.96 C
ATOM 14 N9 A B2453 56.878 135.763 101.945 1.00 32.78 N
ATOM 15 C8 A B2453 57.039 134.875 102.974 1.00 33.19 C
ATOM 16 N7 A B2453 55.928 134.287 103.342 1.00 34.63 N
ATOM 17 C5 A B2453 54.966 134.832 102.504 1.00 34.66 C
ATOM 18 C6 A B2453 53.577 134.613 102.378 1.00 34.57 C
ATOM 19 N6 A B2453 52.890 133.735 103.119 1.00 32.98 N
ATOM 20 N1 A B2453 52.913 135.330 101.448 1.00 34.12 N
ATOM 21 C2 A B2453 53.602 136.199 100.698 1.00 34.13 C
ATOM 22 N3 A B2453 54.900 136.486 100.716 1.00 33.73 N
ATOM 23 C4 A B2453 55.534 135.757 101.651 1.00 33.83 C
ATOM 24 P G B2454 59.927 139.539 104.596 1.00 34.20 P
ATOM 25 OP1 G B2454 58.628 139.445 105.300 1.00 33.46 O
ATOM 26 OP2 G B2454 60.666 140.825 104.603 1.00 33.38 O
ATOM 27 O5' G B2454 60.905 138.376 105.075 1.00 32.79 O
TER
Atoms:
OP1: (53.032,126.361,104.154)
OP2: (53.513,128.878,104.103)
C3': (49.002,127.894,101.404)
C1': (48.033,129.824,102.361)
C5': (50.124,127.160,103.632)
O4': (48.685,129.086,103.382)
C8: (50.108,131.328,102.415)
O2': (46.618,128.263,101.223)
C6: (49.183,134.237,100.687)
C5: (49.401,133.024,101.350)
C4: (48.343,132.135,101.395)
P: (52.575,127.756,104.355)
C4': (48.925,127.736,102.915)
C2': (47.884,128.892,101.154)
C2: (47.032,133.491,100.272)
N1: (47.960,134.445,100.145)
N3: (47.118,132.311,100.871)
N6: (50.112,135.187,100.563)
N7: (50.510,132.505,102.001)
N9: (48.805,131.037,102.079)
O5': (51.265,128.014,103.489)
O3': (48.699,126.675,100.742)
OP2: (53.513,128.878,104.103)
C3': (49.002,127.894,101.404)
C1': (48.033,129.824,102.361)
C5': (50.124,127.160,103.632)
O4': (48.685,129.086,103.382)
C8: (50.108,131.328,102.415)
O2': (46.618,128.263,101.223)
C6: (49.183,134.237,100.687)
C5: (49.401,133.024,101.350)
C4: (48.343,132.135,101.395)
P: (52.575,127.756,104.355)
C4': (48.925,127.736,102.915)
C2': (47.884,128.892,101.154)
C2: (47.032,133.491,100.272)
N1: (47.960,134.445,100.145)
N3: (47.118,132.311,100.871)
N6: (50.112,135.187,100.563)
N7: (50.510,132.505,102.001)
N9: (48.805,131.037,102.079)
O5': (51.265,128.014,103.489)
O3': (48.699,126.675,100.742)
OP1: (60.535,133.531,105.664)
OP2: (61.219,133.000,103.267)
C3': (59.105,137.839,102.808)
C1': (57.895,136.557,101.259)
C5': (61.096,136.157,102.914)
O4': (59.169,135.955,101.452)
C8: (57.039,134.875,102.974)
O2': (58.290,138.851,100.731)
C6: (53.577,134.613,102.378)
C5: (54.966,134.832,102.504)
C4: (55.534,135.757,101.651)
P: (61.166,133.951,104.395)
C4': (60.064,136.905,102.086)
C2': (57.978,137.979,101.798)
C2: (53.602,136.199,100.698)
N1: (52.913,135.330,101.448)
N3: (54.900,136.486,100.716)
N6: (52.890,133.735,103.119)
N7: (55.928,134.287,103.342)
N9: (56.878,135.763,101.945)
O5': (60.457,135.290,103.884)
O3': (59.671,139.107,103.079)
OP2: (61.219,133.000,103.267)
C3': (59.105,137.839,102.808)
C1': (57.895,136.557,101.259)
C5': (61.096,136.157,102.914)
O4': (59.169,135.955,101.452)
C8: (57.039,134.875,102.974)
O2': (58.290,138.851,100.731)
C6: (53.577,134.613,102.378)
C5: (54.966,134.832,102.504)
C4: (55.534,135.757,101.651)
P: (61.166,133.951,104.395)
C4': (60.064,136.905,102.086)
C2': (57.978,137.979,101.798)
C2: (53.602,136.199,100.698)
N1: (52.913,135.330,101.448)
N3: (54.900,136.486,100.716)
N6: (52.890,133.735,103.119)
N7: (55.928,134.287,103.342)
N9: (56.878,135.763,101.945)
O5': (60.457,135.290,103.884)
O3': (59.671,139.107,103.079)
Image (generated by PyMOL):