ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A161:A138

Extra

PDB:
ATOM 1 O3' A A 160 98.963 33.664 4.796 1.00 40.27 O
ATOM 2 P A A 161 98.362 34.360 3.483 1.00 42.01 P
ATOM 3 OP1 A A 161 96.872 34.397 3.620 1.00 41.35 O
ATOM 4 OP2 A A 161 98.984 33.695 2.284 1.00 40.15 O
ATOM 5 O5' A A 161 98.901 35.850 3.601 1.00 41.43 O
ATOM 6 C5' A A 161 98.535 36.671 4.720 1.00 40.82 C
ATOM 7 C4' A A 161 99.442 37.876 4.819 1.00 40.18 C
ATOM 8 O4' A A 161 100.801 37.452 5.107 1.00 39.23 O
ATOM 9 C3' A A 161 99.571 38.749 3.580 1.00 40.15 C
ATOM 10 O3' A A 161 98.517 39.677 3.452 1.00 40.06 O
ATOM 11 C2' A A 161 100.892 39.454 3.831 1.00 40.81 C
ATOM 12 O2' A A 161 100.741 40.530 4.732 1.00 43.15 O
ATOM 13 C1' A A 161 101.712 38.353 4.507 1.00 40.03 C
ATOM 14 N9 A A 161 102.528 37.630 3.524 1.00 39.50 N
ATOM 15 C8 A A 161 102.126 36.688 2.613 1.00 37.17 C
ATOM 16 N7 A A 161 103.091 36.265 1.832 1.00 38.76 N
ATOM 17 C5 A A 161 104.206 36.968 2.264 1.00 37.78 C
ATOM 18 C6 A A 161 105.544 36.977 1.837 1.00 37.95 C
ATOM 19 N6 A A 161 106.008 36.234 0.835 1.00 38.77 N
ATOM 20 N1 A A 161 106.404 37.790 2.483 1.00 37.39 N
ATOM 21 C2 A A 161 105.946 38.539 3.483 1.00 37.30 C
ATOM 22 N3 A A 161 104.714 38.624 3.974 1.00 38.76 N
ATOM 23 C4 A A 161 103.879 37.803 3.312 1.00 38.82 C
ATOM 24 P U A 162 98.074 40.187 1.989 1.00 41.57 P
ATOM 25 OP1 U A 162 98.511 39.177 0.968 1.00 41.54 O
ATOM 26 OP2 U A 162 96.643 40.598 2.047 1.00 40.76 O
ATOM 27 O5' U A 162 98.984 41.464 1.736 1.00 42.53 O
TER

ATOM 1 O3' G B 137 101.562 28.065 -6.640 1.00 54.64 O
ATOM 2 P A B 138 102.432 27.374 -5.477 1.00 53.84 P
ATOM 3 OP1 A B 138 102.717 25.996 -5.971 1.00 55.10 O
ATOM 4 OP2 A B 138 101.768 27.592 -4.153 1.00 52.55 O
ATOM 5 O5' A B 138 103.804 28.161 -5.485 1.00 52.25 O
ATOM 6 C5' A B 138 104.537 28.373 -6.701 1.00 50.30 C
ATOM 7 C4' A B 138 105.564 29.454 -6.490 1.00 49.47 C
ATOM 8 O4' A B 138 104.886 30.677 -6.106 1.00 48.88 O
ATOM 9 C3' A B 138 106.541 29.193 -5.356 1.00 49.13 C
ATOM 10 O3' A B 138 107.645 28.429 -5.789 1.00 48.21 O
ATOM 11 C2' A B 138 106.954 30.594 -4.918 1.00 49.55 C
ATOM 12 O2' A B 138 108.004 31.136 -5.691 1.00 50.94 O
ATOM 13 C1' A B 138 105.679 31.393 -5.177 1.00 48.97 C
ATOM 14 N9 A B 138 104.883 31.653 -3.979 1.00 48.49 N
ATOM 15 C8 A B 138 103.672 31.114 -3.625 1.00 47.83 C
ATOM 16 N7 A B 138 103.184 31.601 -2.510 1.00 48.20 N
ATOM 17 C5 A B 138 104.143 32.512 -2.095 1.00 47.08 C
ATOM 18 C6 A B 138 104.206 33.376 -0.996 1.00 46.28 C
ATOM 19 N6 A B 138 103.243 33.482 -0.084 1.00 45.47 N
ATOM 20 N1 A B 138 105.300 34.151 -0.870 1.00 46.35 N
ATOM 21 C2 A B 138 106.257 34.064 -1.798 1.00 47.39 C
ATOM 22 N3 A B 138 106.308 33.301 -2.885 1.00 48.55 N
ATOM 23 C4 A B 138 105.204 32.540 -2.978 1.00 48.18 C
ATOM 24 P C B 139 108.601 27.742 -4.700 1.00 48.29 P
ATOM 25 OP1 C B 139 109.555 26.837 -5.425 1.00 47.35 O
ATOM 26 OP2 C B 139 107.741 27.202 -3.609 1.00 47.39 O
ATOM 27 O5' C B 139 109.410 28.960 -4.102 1.00 46.77 O
TER

Atoms:
OP1: (96.872,34.397,3.620)
OP2: (98.984,33.695,2.284)
C3': (99.571,38.749,3.580)
C1': (101.712,38.353,4.507)
C5': (98.535,36.671,4.720)
O4': (100.801,37.452,5.107)
C8: (102.126,36.688,2.613)
O2': (100.741,40.530,4.732)
C6: (105.544,36.977,1.837)
C5: (104.206,36.968,2.264)
C4: (103.879,37.803,3.312)
P: (98.362,34.360,3.483)
C4': (99.442,37.876,4.819)
C2': (100.892,39.454,3.831)
C2: (105.946,38.539,3.483)
N1: (106.404,37.790,2.483)
N3: (104.714,38.624,3.974)
N6: (106.008,36.234,0.835)
N7: (103.091,36.265,1.832)
N9: (102.528,37.630,3.524)
O5': (98.901,35.850,3.601)
O3': (98.517,39.677,3.452)
OP1: (102.717,25.996,-5.971)
OP2: (101.768,27.592,-4.153)
C3': (106.541,29.193,-5.356)
C1': (105.679,31.393,-5.177)
C5': (104.537,28.373,-6.701)
O4': (104.886,30.677,-6.106)
C8: (103.672,31.114,-3.625)
O2': (108.004,31.136,-5.691)
C6: (104.206,33.376,-0.996)
C5: (104.143,32.512,-2.095)
C4: (105.204,32.540,-2.978)
P: (102.432,27.374,-5.477)
C4': (105.564,29.454,-6.490)
C2': (106.954,30.594,-4.918)
C2: (106.257,34.064,-1.798)
N1: (105.300,34.151,-0.870)
N3: (106.308,33.301,-2.885)
N6: (103.243,33.482,-0.084)
N7: (103.184,31.601,-2.510)
N9: (104.883,31.653,-3.979)
O5': (103.804,28.161,-5.485)
O3': (107.645,28.429,-5.789)
Image (generated by PyMOL):
PyMOL image
show in jmol