Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XNZ:A19:A48
Extra
PDB:
ATOM 1 O3' U A 18 45.041 -3.501 4.207 1.00 18.25 O
ATOM 2 P A A 19 46.074 -2.827 3.190 1.00 17.08 P
ATOM 3 OP1 A A 19 45.714 -3.214 1.812 1.00 18.30 O
ATOM 4 OP2 A A 19 47.442 -3.082 3.672 1.00 18.14 O
ATOM 5 O5' A A 19 45.765 -1.298 3.483 1.00 16.36 O
ATOM 6 C5' A A 19 44.571 -0.668 2.970 1.00 15.86 C
ATOM 7 C4' A A 19 44.714 0.821 3.218 1.00 15.62 C
ATOM 8 O4' A A 19 44.628 1.068 4.648 1.00 15.24 O
ATOM 9 C3' A A 19 46.063 1.373 2.769 1.00 15.46 C
ATOM 10 O3' A A 19 45.858 2.620 2.154 1.00 16.36 O
ATOM 11 C2' A A 19 46.853 1.488 4.082 1.00 15.38 C
ATOM 12 O2' A A 19 47.793 2.553 4.072 1.00 17.64 O
ATOM 13 C1' A A 19 45.775 1.728 5.134 1.00 16.70 C
ATOM 14 N9 A A 19 46.095 1.084 6.408 1.00 15.00 N
ATOM 15 C8 A A 19 45.847 -0.218 6.743 1.00 16.61 C
ATOM 16 N7 A A 19 46.251 -0.550 7.953 1.00 16.63 N
ATOM 17 C5 A A 19 46.821 0.613 8.434 1.00 16.95 C
ATOM 18 C6 A A 19 47.441 0.935 9.663 1.00 16.86 C
ATOM 19 N6 A A 19 47.596 0.056 10.671 1.00 17.10 N
ATOM 20 N1 A A 19 47.892 2.200 9.813 1.00 18.04 N
ATOM 21 C2 A A 19 47.739 3.089 8.817 1.00 17.00 C
ATOM 22 N3 A A 19 47.167 2.896 7.619 1.00 16.95 N
ATOM 23 C4 A A 19 46.734 1.633 7.495 1.00 15.20 C
ATOM 24 P U A 20 45.890 2.733 0.557 1.00 17.39 P
ATOM 25 OP1 U A 20 47.111 2.082 0.063 1.00 17.81 O
ATOM 26 OP2 U A 20 45.607 4.173 0.265 1.00 20.75 O
ATOM 27 O5' U A 20 44.647 1.871 0.094 1.00 15.57 O
TER
ATOM 1 O3' U B 47 49.774 -8.204 9.990 1.00 31.78 O
ATOM 2 P A B 48 50.220 -9.581 10.679 1.00 34.33 P
ATOM 3 OP1 A B 48 51.665 -9.491 11.002 1.00 32.90 O
ATOM 4 OP2 A B 48 49.677 -10.658 9.825 1.00 33.44 O
ATOM 5 O5' A B 48 49.439 -9.550 12.074 1.00 32.69 O
ATOM 6 C5' A B 48 48.050 -9.689 12.108 1.00 30.50 C
ATOM 7 C4' A B 48 47.505 -9.151 13.412 1.00 29.29 C
ATOM 8 O4' A B 48 47.675 -7.705 13.483 1.00 27.63 O
ATOM 9 C3' A B 48 46.015 -9.413 13.522 1.00 27.88 C
ATOM 10 O3' A B 48 45.804 -10.577 14.311 1.00 27.86 O
ATOM 11 C2' A B 48 45.472 -8.141 14.167 1.00 26.83 C
ATOM 12 O2' A B 48 45.594 -8.164 15.575 1.00 27.38 O
ATOM 13 C1' A B 48 46.408 -7.067 13.630 1.00 25.34 C
ATOM 14 N9 A B 48 46.108 -6.417 12.344 1.00 22.98 N
ATOM 15 C8 A B 48 45.618 -6.970 11.179 1.00 20.66 C
ATOM 16 N7 A B 48 45.511 -6.101 10.189 1.00 21.10 N
ATOM 17 C5 A B 48 45.967 -4.907 10.728 1.00 18.92 C
ATOM 18 C6 A B 48 46.113 -3.599 10.200 1.00 19.28 C
ATOM 19 N6 A B 48 45.805 -3.258 8.940 1.00 18.55 N
ATOM 20 N1 A B 48 46.611 -2.643 11.015 1.00 20.28 N
ATOM 21 C2 A B 48 46.941 -2.964 12.279 1.00 20.60 C
ATOM 22 N3 A B 48 46.838 -4.150 12.890 1.00 20.65 N
ATOM 23 C4 A B 48 46.345 -5.087 12.056 1.00 19.67 C
ATOM 24 P A B 49 44.496 -11.463 14.102 1.00 28.16 P
ATOM 25 OP1 A B 49 44.656 -12.672 14.956 1.00 30.69 O
ATOM 26 OP2 A B 49 44.147 -11.582 12.665 1.00 28.67 O
ATOM 27 O5' A B 49 43.400 -10.544 14.800 1.00 25.39 O
TER
ATOM 2 P A A 19 46.074 -2.827 3.190 1.00 17.08 P
ATOM 3 OP1 A A 19 45.714 -3.214 1.812 1.00 18.30 O
ATOM 4 OP2 A A 19 47.442 -3.082 3.672 1.00 18.14 O
ATOM 5 O5' A A 19 45.765 -1.298 3.483 1.00 16.36 O
ATOM 6 C5' A A 19 44.571 -0.668 2.970 1.00 15.86 C
ATOM 7 C4' A A 19 44.714 0.821 3.218 1.00 15.62 C
ATOM 8 O4' A A 19 44.628 1.068 4.648 1.00 15.24 O
ATOM 9 C3' A A 19 46.063 1.373 2.769 1.00 15.46 C
ATOM 10 O3' A A 19 45.858 2.620 2.154 1.00 16.36 O
ATOM 11 C2' A A 19 46.853 1.488 4.082 1.00 15.38 C
ATOM 12 O2' A A 19 47.793 2.553 4.072 1.00 17.64 O
ATOM 13 C1' A A 19 45.775 1.728 5.134 1.00 16.70 C
ATOM 14 N9 A A 19 46.095 1.084 6.408 1.00 15.00 N
ATOM 15 C8 A A 19 45.847 -0.218 6.743 1.00 16.61 C
ATOM 16 N7 A A 19 46.251 -0.550 7.953 1.00 16.63 N
ATOM 17 C5 A A 19 46.821 0.613 8.434 1.00 16.95 C
ATOM 18 C6 A A 19 47.441 0.935 9.663 1.00 16.86 C
ATOM 19 N6 A A 19 47.596 0.056 10.671 1.00 17.10 N
ATOM 20 N1 A A 19 47.892 2.200 9.813 1.00 18.04 N
ATOM 21 C2 A A 19 47.739 3.089 8.817 1.00 17.00 C
ATOM 22 N3 A A 19 47.167 2.896 7.619 1.00 16.95 N
ATOM 23 C4 A A 19 46.734 1.633 7.495 1.00 15.20 C
ATOM 24 P U A 20 45.890 2.733 0.557 1.00 17.39 P
ATOM 25 OP1 U A 20 47.111 2.082 0.063 1.00 17.81 O
ATOM 26 OP2 U A 20 45.607 4.173 0.265 1.00 20.75 O
ATOM 27 O5' U A 20 44.647 1.871 0.094 1.00 15.57 O
TER
ATOM 1 O3' U B 47 49.774 -8.204 9.990 1.00 31.78 O
ATOM 2 P A B 48 50.220 -9.581 10.679 1.00 34.33 P
ATOM 3 OP1 A B 48 51.665 -9.491 11.002 1.00 32.90 O
ATOM 4 OP2 A B 48 49.677 -10.658 9.825 1.00 33.44 O
ATOM 5 O5' A B 48 49.439 -9.550 12.074 1.00 32.69 O
ATOM 6 C5' A B 48 48.050 -9.689 12.108 1.00 30.50 C
ATOM 7 C4' A B 48 47.505 -9.151 13.412 1.00 29.29 C
ATOM 8 O4' A B 48 47.675 -7.705 13.483 1.00 27.63 O
ATOM 9 C3' A B 48 46.015 -9.413 13.522 1.00 27.88 C
ATOM 10 O3' A B 48 45.804 -10.577 14.311 1.00 27.86 O
ATOM 11 C2' A B 48 45.472 -8.141 14.167 1.00 26.83 C
ATOM 12 O2' A B 48 45.594 -8.164 15.575 1.00 27.38 O
ATOM 13 C1' A B 48 46.408 -7.067 13.630 1.00 25.34 C
ATOM 14 N9 A B 48 46.108 -6.417 12.344 1.00 22.98 N
ATOM 15 C8 A B 48 45.618 -6.970 11.179 1.00 20.66 C
ATOM 16 N7 A B 48 45.511 -6.101 10.189 1.00 21.10 N
ATOM 17 C5 A B 48 45.967 -4.907 10.728 1.00 18.92 C
ATOM 18 C6 A B 48 46.113 -3.599 10.200 1.00 19.28 C
ATOM 19 N6 A B 48 45.805 -3.258 8.940 1.00 18.55 N
ATOM 20 N1 A B 48 46.611 -2.643 11.015 1.00 20.28 N
ATOM 21 C2 A B 48 46.941 -2.964 12.279 1.00 20.60 C
ATOM 22 N3 A B 48 46.838 -4.150 12.890 1.00 20.65 N
ATOM 23 C4 A B 48 46.345 -5.087 12.056 1.00 19.67 C
ATOM 24 P A B 49 44.496 -11.463 14.102 1.00 28.16 P
ATOM 25 OP1 A B 49 44.656 -12.672 14.956 1.00 30.69 O
ATOM 26 OP2 A B 49 44.147 -11.582 12.665 1.00 28.67 O
ATOM 27 O5' A B 49 43.400 -10.544 14.800 1.00 25.39 O
TER
Atoms:
OP1: (45.714,-3.214,1.812)
OP2: (47.442,-3.082,3.672)
C3': (46.063,1.373,2.769)
C1': (45.775,1.728,5.134)
C5': (44.571,-0.668,2.970)
O4': (44.628,1.068,4.648)
C8: (45.847,-0.218,6.743)
O2': (47.793,2.553,4.072)
C6: (47.441,0.935,9.663)
C5: (46.821,0.613,8.434)
C4: (46.734,1.633,7.495)
P: (46.074,-2.827,3.190)
C4': (44.714,0.821,3.218)
C2': (46.853,1.488,4.082)
C2: (47.739,3.089,8.817)
N1: (47.892,2.200,9.813)
N3: (47.167,2.896,7.619)
N6: (47.596,0.056,10.671)
N7: (46.251,-0.550,7.953)
N9: (46.095,1.084,6.408)
O5': (45.765,-1.298,3.483)
O3': (45.858,2.620,2.154)
OP2: (47.442,-3.082,3.672)
C3': (46.063,1.373,2.769)
C1': (45.775,1.728,5.134)
C5': (44.571,-0.668,2.970)
O4': (44.628,1.068,4.648)
C8: (45.847,-0.218,6.743)
O2': (47.793,2.553,4.072)
C6: (47.441,0.935,9.663)
C5: (46.821,0.613,8.434)
C4: (46.734,1.633,7.495)
P: (46.074,-2.827,3.190)
C4': (44.714,0.821,3.218)
C2': (46.853,1.488,4.082)
C2: (47.739,3.089,8.817)
N1: (47.892,2.200,9.813)
N3: (47.167,2.896,7.619)
N6: (47.596,0.056,10.671)
N7: (46.251,-0.550,7.953)
N9: (46.095,1.084,6.408)
O5': (45.765,-1.298,3.483)
O3': (45.858,2.620,2.154)
OP1: (51.665,-9.491,11.002)
OP2: (49.677,-10.658,9.825)
C3': (46.015,-9.413,13.522)
C1': (46.408,-7.067,13.630)
C5': (48.050,-9.689,12.108)
O4': (47.675,-7.705,13.483)
C8: (45.618,-6.970,11.179)
O2': (45.594,-8.164,15.575)
C6: (46.113,-3.599,10.200)
C5: (45.967,-4.907,10.728)
C4: (46.345,-5.087,12.056)
P: (50.220,-9.581,10.679)
C4': (47.505,-9.151,13.412)
C2': (45.472,-8.141,14.167)
C2: (46.941,-2.964,12.279)
N1: (46.611,-2.643,11.015)
N3: (46.838,-4.150,12.890)
N6: (45.805,-3.258,8.940)
N7: (45.511,-6.101,10.189)
N9: (46.108,-6.417,12.344)
O5': (49.439,-9.550,12.074)
O3': (45.804,-10.577,14.311)
OP2: (49.677,-10.658,9.825)
C3': (46.015,-9.413,13.522)
C1': (46.408,-7.067,13.630)
C5': (48.050,-9.689,12.108)
O4': (47.675,-7.705,13.483)
C8: (45.618,-6.970,11.179)
O2': (45.594,-8.164,15.575)
C6: (46.113,-3.599,10.200)
C5: (45.967,-4.907,10.728)
C4: (46.345,-5.087,12.056)
P: (50.220,-9.581,10.679)
C4': (47.505,-9.151,13.412)
C2': (45.472,-8.141,14.167)
C2: (46.941,-2.964,12.279)
N1: (46.611,-2.643,11.015)
N3: (46.838,-4.150,12.890)
N6: (45.805,-3.258,8.940)
N7: (45.511,-6.101,10.189)
N9: (46.108,-6.417,12.344)
O5': (49.439,-9.550,12.074)
O3': (45.804,-10.577,14.311)
Image (generated by PyMOL):