Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5O:E22:E58
Extra
PDB:
ATOM 1 O3' A A 21 -0.812 11.619 110.503 1.00 81.54 O
ATOM 2 P A A 22 0.398 12.498 109.920 1.00 77.45 P
ATOM 3 OP1 A A 22 0.781 11.928 108.606 1.00 82.19 O
ATOM 4 OP2 A A 22 1.418 12.625 110.990 1.00 81.67 O
ATOM 5 O5' A A 22 -0.245 13.937 109.690 1.00 74.31 O
ATOM 6 C5' A A 22 -1.334 14.110 108.791 1.00 68.56 C
ATOM 7 C4' A A 22 -1.962 15.473 108.976 1.00 65.63 C
ATOM 8 O4' A A 22 -2.476 15.588 110.331 1.00 66.40 O
ATOM 9 C3' A A 22 -1.037 16.671 108.838 1.00 73.54 C
ATOM 10 O3' A A 22 -0.842 17.030 107.472 1.00 70.06 O
ATOM 11 C2' A A 22 -1.809 17.746 109.593 1.00 76.25 C
ATOM 12 O2' A A 22 -2.858 18.308 108.832 1.00 80.48 O
ATOM 13 C1' A A 22 -2.391 16.940 110.756 1.00 77.47 C
ATOM 14 N9 A A 22 -1.531 17.006 111.936 1.00 71.49 N
ATOM 15 C8 A A 22 -0.621 16.081 112.378 1.00 71.04 C
ATOM 16 N7 A A 22 0.028 16.452 113.455 1.00 70.88 N
ATOM 17 C5 A A 22 -0.496 17.702 113.744 1.00 70.47 C
ATOM 18 C6 A A 22 -0.224 18.627 114.765 1.00 69.84 C
ATOM 19 N6 A A 22 0.684 18.426 115.720 1.00 68.99 N
ATOM 20 N1 A A 22 -0.927 19.781 114.771 1.00 70.34 N
ATOM 21 C2 A A 22 -1.836 19.981 113.809 1.00 71.14 C
ATOM 22 N3 A A 22 -2.178 19.189 112.795 1.00 70.73 N
ATOM 23 C4 A A 22 -1.463 18.052 112.821 1.00 70.03 C
ATOM 24 P A A 23 0.474 17.851 107.042 1.00 77.76 P
ATOM 25 OP1 A A 23 0.428 18.093 105.579 1.00 85.01 O
ATOM 26 OP2 A A 23 1.648 17.160 107.634 1.00 83.99 O
ATOM 27 O5' A A 23 0.311 19.258 107.768 1.00 73.20 O
TER
ATOM 1 O3' U B 57 5.578 8.325 120.145 1.00 76.84 O
ATOM 2 P A B 58 4.133 9.024 120.129 1.00 65.79 P
ATOM 3 OP1 A B 58 3.327 8.361 121.182 1.00 75.90 O
ATOM 4 OP2 A B 58 3.633 9.044 118.730 1.00 72.36 O
ATOM 5 O5' A B 58 4.422 10.520 120.589 1.00 69.55 O
ATOM 6 C5' A B 58 5.391 10.807 121.589 1.00 50.48 C
ATOM 7 C4' A B 58 5.664 12.287 121.613 1.00 62.20 C
ATOM 8 O4' A B 58 6.024 12.698 120.269 1.00 66.97 O
ATOM 9 C3' A B 58 4.461 13.150 121.957 1.00 65.42 C
ATOM 10 O3' A B 58 4.375 13.321 123.365 1.00 70.26 O
ATOM 11 C2' A B 58 4.796 14.463 121.263 1.00 67.56 C
ATOM 12 O2' A B 58 5.717 15.251 121.993 1.00 68.89 O
ATOM 13 C1' A B 58 5.453 13.960 119.980 1.00 61.84 C
ATOM 14 N9 A B 58 4.525 13.786 118.863 1.00 59.59 N
ATOM 15 C8 A B 58 4.142 12.605 118.280 1.00 58.03 C
ATOM 16 N7 A B 58 3.302 12.755 117.285 1.00 58.68 N
ATOM 17 C5 A B 58 3.118 14.128 117.209 1.00 57.10 C
ATOM 18 C6 A B 58 2.336 14.931 116.359 1.00 57.61 C
ATOM 19 N6 A B 58 1.563 14.442 115.386 1.00 53.54 N
ATOM 20 N1 A B 58 2.377 16.270 116.546 1.00 55.89 N
ATOM 21 C2 A B 58 3.148 16.755 117.524 1.00 59.44 C
ATOM 22 N3 A B 58 3.925 16.101 118.390 1.00 61.75 N
ATOM 23 C4 A B 58 3.865 14.775 118.175 1.00 57.59 C
ATOM 24 P U B 59 2.944 13.275 124.088 1.00 64.41 P
ATOM 25 OP1 U B 59 3.187 13.587 125.519 1.00 80.07 O
ATOM 26 OP2 U B 59 2.294 11.991 123.718 1.00 61.35 O
ATOM 27 O5' U B 59 2.145 14.497 123.435 1.00 69.32 O
TER
ATOM 2 P A A 22 0.398 12.498 109.920 1.00 77.45 P
ATOM 3 OP1 A A 22 0.781 11.928 108.606 1.00 82.19 O
ATOM 4 OP2 A A 22 1.418 12.625 110.990 1.00 81.67 O
ATOM 5 O5' A A 22 -0.245 13.937 109.690 1.00 74.31 O
ATOM 6 C5' A A 22 -1.334 14.110 108.791 1.00 68.56 C
ATOM 7 C4' A A 22 -1.962 15.473 108.976 1.00 65.63 C
ATOM 8 O4' A A 22 -2.476 15.588 110.331 1.00 66.40 O
ATOM 9 C3' A A 22 -1.037 16.671 108.838 1.00 73.54 C
ATOM 10 O3' A A 22 -0.842 17.030 107.472 1.00 70.06 O
ATOM 11 C2' A A 22 -1.809 17.746 109.593 1.00 76.25 C
ATOM 12 O2' A A 22 -2.858 18.308 108.832 1.00 80.48 O
ATOM 13 C1' A A 22 -2.391 16.940 110.756 1.00 77.47 C
ATOM 14 N9 A A 22 -1.531 17.006 111.936 1.00 71.49 N
ATOM 15 C8 A A 22 -0.621 16.081 112.378 1.00 71.04 C
ATOM 16 N7 A A 22 0.028 16.452 113.455 1.00 70.88 N
ATOM 17 C5 A A 22 -0.496 17.702 113.744 1.00 70.47 C
ATOM 18 C6 A A 22 -0.224 18.627 114.765 1.00 69.84 C
ATOM 19 N6 A A 22 0.684 18.426 115.720 1.00 68.99 N
ATOM 20 N1 A A 22 -0.927 19.781 114.771 1.00 70.34 N
ATOM 21 C2 A A 22 -1.836 19.981 113.809 1.00 71.14 C
ATOM 22 N3 A A 22 -2.178 19.189 112.795 1.00 70.73 N
ATOM 23 C4 A A 22 -1.463 18.052 112.821 1.00 70.03 C
ATOM 24 P A A 23 0.474 17.851 107.042 1.00 77.76 P
ATOM 25 OP1 A A 23 0.428 18.093 105.579 1.00 85.01 O
ATOM 26 OP2 A A 23 1.648 17.160 107.634 1.00 83.99 O
ATOM 27 O5' A A 23 0.311 19.258 107.768 1.00 73.20 O
TER
ATOM 1 O3' U B 57 5.578 8.325 120.145 1.00 76.84 O
ATOM 2 P A B 58 4.133 9.024 120.129 1.00 65.79 P
ATOM 3 OP1 A B 58 3.327 8.361 121.182 1.00 75.90 O
ATOM 4 OP2 A B 58 3.633 9.044 118.730 1.00 72.36 O
ATOM 5 O5' A B 58 4.422 10.520 120.589 1.00 69.55 O
ATOM 6 C5' A B 58 5.391 10.807 121.589 1.00 50.48 C
ATOM 7 C4' A B 58 5.664 12.287 121.613 1.00 62.20 C
ATOM 8 O4' A B 58 6.024 12.698 120.269 1.00 66.97 O
ATOM 9 C3' A B 58 4.461 13.150 121.957 1.00 65.42 C
ATOM 10 O3' A B 58 4.375 13.321 123.365 1.00 70.26 O
ATOM 11 C2' A B 58 4.796 14.463 121.263 1.00 67.56 C
ATOM 12 O2' A B 58 5.717 15.251 121.993 1.00 68.89 O
ATOM 13 C1' A B 58 5.453 13.960 119.980 1.00 61.84 C
ATOM 14 N9 A B 58 4.525 13.786 118.863 1.00 59.59 N
ATOM 15 C8 A B 58 4.142 12.605 118.280 1.00 58.03 C
ATOM 16 N7 A B 58 3.302 12.755 117.285 1.00 58.68 N
ATOM 17 C5 A B 58 3.118 14.128 117.209 1.00 57.10 C
ATOM 18 C6 A B 58 2.336 14.931 116.359 1.00 57.61 C
ATOM 19 N6 A B 58 1.563 14.442 115.386 1.00 53.54 N
ATOM 20 N1 A B 58 2.377 16.270 116.546 1.00 55.89 N
ATOM 21 C2 A B 58 3.148 16.755 117.524 1.00 59.44 C
ATOM 22 N3 A B 58 3.925 16.101 118.390 1.00 61.75 N
ATOM 23 C4 A B 58 3.865 14.775 118.175 1.00 57.59 C
ATOM 24 P U B 59 2.944 13.275 124.088 1.00 64.41 P
ATOM 25 OP1 U B 59 3.187 13.587 125.519 1.00 80.07 O
ATOM 26 OP2 U B 59 2.294 11.991 123.718 1.00 61.35 O
ATOM 27 O5' U B 59 2.145 14.497 123.435 1.00 69.32 O
TER
Atoms:
OP1: (0.781,11.928,108.606)
OP2: (1.418,12.625,110.990)
C3': (-1.037,16.671,108.838)
C1': (-2.391,16.940,110.756)
C5': (-1.334,14.110,108.791)
O4': (-2.476,15.588,110.331)
C8: (-0.621,16.081,112.378)
O2': (-2.858,18.308,108.832)
C6: (-0.224,18.627,114.765)
C5: (-0.496,17.702,113.744)
C4: (-1.463,18.052,112.821)
P: (0.398,12.498,109.920)
C4': (-1.962,15.473,108.976)
C2': (-1.809,17.746,109.593)
C2: (-1.836,19.981,113.809)
N1: (-0.927,19.781,114.771)
N3: (-2.178,19.189,112.795)
N6: (0.684,18.426,115.720)
N7: (0.028,16.452,113.455)
N9: (-1.531,17.006,111.936)
O5': (-0.245,13.937,109.690)
O3': (-0.842,17.030,107.472)
OP2: (1.418,12.625,110.990)
C3': (-1.037,16.671,108.838)
C1': (-2.391,16.940,110.756)
C5': (-1.334,14.110,108.791)
O4': (-2.476,15.588,110.331)
C8: (-0.621,16.081,112.378)
O2': (-2.858,18.308,108.832)
C6: (-0.224,18.627,114.765)
C5: (-0.496,17.702,113.744)
C4: (-1.463,18.052,112.821)
P: (0.398,12.498,109.920)
C4': (-1.962,15.473,108.976)
C2': (-1.809,17.746,109.593)
C2: (-1.836,19.981,113.809)
N1: (-0.927,19.781,114.771)
N3: (-2.178,19.189,112.795)
N6: (0.684,18.426,115.720)
N7: (0.028,16.452,113.455)
N9: (-1.531,17.006,111.936)
O5': (-0.245,13.937,109.690)
O3': (-0.842,17.030,107.472)
OP1: (3.327,8.361,121.182)
OP2: (3.633,9.044,118.730)
C3': (4.461,13.150,121.957)
C1': (5.453,13.960,119.980)
C5': (5.391,10.807,121.589)
O4': (6.024,12.698,120.269)
C8: (4.142,12.605,118.280)
O2': (5.717,15.251,121.993)
C6: (2.336,14.931,116.359)
C5: (3.118,14.128,117.209)
C4: (3.865,14.775,118.175)
P: (4.133,9.024,120.129)
C4': (5.664,12.287,121.613)
C2': (4.796,14.463,121.263)
C2: (3.148,16.755,117.524)
N1: (2.377,16.270,116.546)
N3: (3.925,16.101,118.390)
N6: (1.563,14.442,115.386)
N7: (3.302,12.755,117.285)
N9: (4.525,13.786,118.863)
O5': (4.422,10.520,120.589)
O3': (4.375,13.321,123.365)
OP2: (3.633,9.044,118.730)
C3': (4.461,13.150,121.957)
C1': (5.453,13.960,119.980)
C5': (5.391,10.807,121.589)
O4': (6.024,12.698,120.269)
C8: (4.142,12.605,118.280)
O2': (5.717,15.251,121.993)
C6: (2.336,14.931,116.359)
C5: (3.118,14.128,117.209)
C4: (3.865,14.775,118.175)
P: (4.133,9.024,120.129)
C4': (5.664,12.287,121.613)
C2': (4.796,14.463,121.263)
C2: (3.148,16.755,117.524)
N1: (2.377,16.270,116.546)
N3: (3.925,16.101,118.390)
N6: (1.563,14.442,115.386)
N7: (3.302,12.755,117.285)
N9: (4.525,13.786,118.863)
O5': (4.422,10.520,120.589)
O3': (4.375,13.321,123.365)
Image (generated by PyMOL):