Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2R8S:R96:R21
Extra
PDB:
ATOM 1 O3' C A 95 37.610 -25.353 36.764 1.00 40.89 O
ATOM 2 P A A 96 36.559 -24.300 37.329 1.00 44.13 P
ATOM 3 OP1 A A 96 37.054 -22.953 36.971 1.00 42.49 O
ATOM 4 OP2 A A 96 36.219 -24.639 38.727 1.00 37.64 O
ATOM 5 O5' A A 96 35.304 -24.659 36.401 1.00 41.70 O
ATOM 6 C5' A A 96 35.349 -24.355 35.012 1.00 45.72 C
ATOM 7 C4' A A 96 34.375 -25.202 34.205 1.00 47.06 C
ATOM 8 O4' A A 96 34.795 -26.592 34.218 1.00 46.26 O
ATOM 9 C3' A A 96 32.941 -25.225 34.719 1.00 50.13 C
ATOM 10 O3' A A 96 32.018 -25.457 33.654 1.00 57.39 O
ATOM 11 C2' A A 96 32.956 -26.406 35.680 1.00 48.07 C
ATOM 12 O2' A A 96 31.672 -26.947 35.933 1.00 48.52 O
ATOM 13 C1' A A 96 33.844 -27.383 34.906 1.00 45.32 C
ATOM 14 N9 A A 96 34.498 -28.350 35.787 1.00 43.44 N
ATOM 15 C8 A A 96 35.443 -28.090 36.739 1.00 40.92 C
ATOM 16 N7 A A 96 35.830 -29.150 37.397 1.00 40.03 N
ATOM 17 C5 A A 96 35.084 -30.178 36.852 1.00 42.32 C
ATOM 18 C6 A A 96 35.024 -31.564 37.121 1.00 44.61 C
ATOM 19 N6 A A 96 35.766 -32.168 38.051 1.00 42.29 N
ATOM 20 N1 A A 96 34.160 -32.312 36.394 1.00 44.58 N
ATOM 21 C2 A A 96 33.408 -31.708 35.464 1.00 42.31 C
ATOM 22 N3 A A 96 33.382 -30.419 35.123 1.00 42.06 N
ATOM 23 C4 A A 96 34.254 -29.701 35.855 1.00 42.42 C
ATOM 24 P U A 97 31.638 -24.321 32.595 1.00 61.55 P
ATOM 25 OP1 U A 97 31.819 -23.001 33.238 1.00 61.18 O
ATOM 26 OP2 U A 97 30.325 -24.702 32.039 1.00 61.23 O
ATOM 27 O5' U A 97 32.749 -24.495 31.453 1.00 67.41 O
TER
ATOM 1 O3' A B 20 34.607 -33.807 45.462 1.00 65.33 O
ATOM 2 P A B 21 35.676 -33.210 46.500 1.00 68.38 P
ATOM 3 OP1 A B 21 35.183 -33.533 47.853 1.00 71.10 O
ATOM 4 OP2 A B 21 35.950 -31.802 46.116 1.00 69.95 O
ATOM 5 O5' A B 21 37.000 -34.078 46.295 1.00 63.14 O
ATOM 6 C5' A B 21 38.277 -33.613 46.758 1.00 58.44 C
ATOM 7 C4' A B 21 39.328 -33.940 45.713 1.00 54.18 C
ATOM 8 O4' A B 21 38.861 -33.428 44.446 1.00 49.84 O
ATOM 9 C3' A B 21 40.717 -33.347 45.914 1.00 51.26 C
ATOM 10 O3' A B 21 41.685 -34.308 45.556 1.00 53.72 O
ATOM 11 C2' A B 21 40.786 -32.161 44.963 1.00 47.55 C
ATOM 12 O2' A B 21 42.078 -31.948 44.422 1.00 45.69 O
ATOM 13 C1' A B 21 39.832 -32.595 43.859 1.00 44.16 C
ATOM 14 N9 A B 21 39.150 -31.499 43.167 1.00 41.08 N
ATOM 15 C8 A B 21 38.752 -30.287 43.674 1.00 38.09 C
ATOM 16 N7 A B 21 38.173 -29.523 42.780 1.00 36.37 N
ATOM 17 C5 A B 21 38.181 -30.285 41.623 1.00 38.00 C
ATOM 18 C6 A B 21 37.714 -30.046 40.319 1.00 38.93 C
ATOM 19 N6 A B 21 37.112 -28.911 39.951 1.00 38.93 N
ATOM 20 N1 A B 21 37.886 -31.017 39.402 1.00 39.39 N
ATOM 21 C2 A B 21 38.479 -32.160 39.761 1.00 39.00 C
ATOM 22 N3 A B 21 38.967 -32.495 40.949 1.00 37.29 N
ATOM 23 C4 A B 21 38.779 -31.507 41.844 1.00 39.37 C
ATOM 24 P C B 22 42.454 -35.114 46.691 1.00 54.91 P
ATOM 25 OP1 C B 22 41.438 -35.614 47.642 1.00 57.30 O
ATOM 26 OP2 C B 22 43.606 -34.327 47.165 1.00 53.29 O
ATOM 27 O5' C B 22 43.011 -36.353 45.857 1.00 57.09 O
TER
ATOM 2 P A A 96 36.559 -24.300 37.329 1.00 44.13 P
ATOM 3 OP1 A A 96 37.054 -22.953 36.971 1.00 42.49 O
ATOM 4 OP2 A A 96 36.219 -24.639 38.727 1.00 37.64 O
ATOM 5 O5' A A 96 35.304 -24.659 36.401 1.00 41.70 O
ATOM 6 C5' A A 96 35.349 -24.355 35.012 1.00 45.72 C
ATOM 7 C4' A A 96 34.375 -25.202 34.205 1.00 47.06 C
ATOM 8 O4' A A 96 34.795 -26.592 34.218 1.00 46.26 O
ATOM 9 C3' A A 96 32.941 -25.225 34.719 1.00 50.13 C
ATOM 10 O3' A A 96 32.018 -25.457 33.654 1.00 57.39 O
ATOM 11 C2' A A 96 32.956 -26.406 35.680 1.00 48.07 C
ATOM 12 O2' A A 96 31.672 -26.947 35.933 1.00 48.52 O
ATOM 13 C1' A A 96 33.844 -27.383 34.906 1.00 45.32 C
ATOM 14 N9 A A 96 34.498 -28.350 35.787 1.00 43.44 N
ATOM 15 C8 A A 96 35.443 -28.090 36.739 1.00 40.92 C
ATOM 16 N7 A A 96 35.830 -29.150 37.397 1.00 40.03 N
ATOM 17 C5 A A 96 35.084 -30.178 36.852 1.00 42.32 C
ATOM 18 C6 A A 96 35.024 -31.564 37.121 1.00 44.61 C
ATOM 19 N6 A A 96 35.766 -32.168 38.051 1.00 42.29 N
ATOM 20 N1 A A 96 34.160 -32.312 36.394 1.00 44.58 N
ATOM 21 C2 A A 96 33.408 -31.708 35.464 1.00 42.31 C
ATOM 22 N3 A A 96 33.382 -30.419 35.123 1.00 42.06 N
ATOM 23 C4 A A 96 34.254 -29.701 35.855 1.00 42.42 C
ATOM 24 P U A 97 31.638 -24.321 32.595 1.00 61.55 P
ATOM 25 OP1 U A 97 31.819 -23.001 33.238 1.00 61.18 O
ATOM 26 OP2 U A 97 30.325 -24.702 32.039 1.00 61.23 O
ATOM 27 O5' U A 97 32.749 -24.495 31.453 1.00 67.41 O
TER
ATOM 1 O3' A B 20 34.607 -33.807 45.462 1.00 65.33 O
ATOM 2 P A B 21 35.676 -33.210 46.500 1.00 68.38 P
ATOM 3 OP1 A B 21 35.183 -33.533 47.853 1.00 71.10 O
ATOM 4 OP2 A B 21 35.950 -31.802 46.116 1.00 69.95 O
ATOM 5 O5' A B 21 37.000 -34.078 46.295 1.00 63.14 O
ATOM 6 C5' A B 21 38.277 -33.613 46.758 1.00 58.44 C
ATOM 7 C4' A B 21 39.328 -33.940 45.713 1.00 54.18 C
ATOM 8 O4' A B 21 38.861 -33.428 44.446 1.00 49.84 O
ATOM 9 C3' A B 21 40.717 -33.347 45.914 1.00 51.26 C
ATOM 10 O3' A B 21 41.685 -34.308 45.556 1.00 53.72 O
ATOM 11 C2' A B 21 40.786 -32.161 44.963 1.00 47.55 C
ATOM 12 O2' A B 21 42.078 -31.948 44.422 1.00 45.69 O
ATOM 13 C1' A B 21 39.832 -32.595 43.859 1.00 44.16 C
ATOM 14 N9 A B 21 39.150 -31.499 43.167 1.00 41.08 N
ATOM 15 C8 A B 21 38.752 -30.287 43.674 1.00 38.09 C
ATOM 16 N7 A B 21 38.173 -29.523 42.780 1.00 36.37 N
ATOM 17 C5 A B 21 38.181 -30.285 41.623 1.00 38.00 C
ATOM 18 C6 A B 21 37.714 -30.046 40.319 1.00 38.93 C
ATOM 19 N6 A B 21 37.112 -28.911 39.951 1.00 38.93 N
ATOM 20 N1 A B 21 37.886 -31.017 39.402 1.00 39.39 N
ATOM 21 C2 A B 21 38.479 -32.160 39.761 1.00 39.00 C
ATOM 22 N3 A B 21 38.967 -32.495 40.949 1.00 37.29 N
ATOM 23 C4 A B 21 38.779 -31.507 41.844 1.00 39.37 C
ATOM 24 P C B 22 42.454 -35.114 46.691 1.00 54.91 P
ATOM 25 OP1 C B 22 41.438 -35.614 47.642 1.00 57.30 O
ATOM 26 OP2 C B 22 43.606 -34.327 47.165 1.00 53.29 O
ATOM 27 O5' C B 22 43.011 -36.353 45.857 1.00 57.09 O
TER
Atoms:
OP1: (37.054,-22.953,36.971)
OP2: (36.219,-24.639,38.727)
C3': (32.941,-25.225,34.719)
C1': (33.844,-27.383,34.906)
C5': (35.349,-24.355,35.012)
O4': (34.795,-26.592,34.218)
C8: (35.443,-28.090,36.739)
O2': (31.672,-26.947,35.933)
C6: (35.024,-31.564,37.121)
C5: (35.084,-30.178,36.852)
C4: (34.254,-29.701,35.855)
P: (36.559,-24.300,37.329)
C4': (34.375,-25.202,34.205)
C2': (32.956,-26.406,35.680)
C2: (33.408,-31.708,35.464)
N1: (34.160,-32.312,36.394)
N3: (33.382,-30.419,35.123)
N6: (35.766,-32.168,38.051)
N7: (35.830,-29.150,37.397)
N9: (34.498,-28.350,35.787)
O5': (35.304,-24.659,36.401)
O3': (32.018,-25.457,33.654)
OP2: (36.219,-24.639,38.727)
C3': (32.941,-25.225,34.719)
C1': (33.844,-27.383,34.906)
C5': (35.349,-24.355,35.012)
O4': (34.795,-26.592,34.218)
C8: (35.443,-28.090,36.739)
O2': (31.672,-26.947,35.933)
C6: (35.024,-31.564,37.121)
C5: (35.084,-30.178,36.852)
C4: (34.254,-29.701,35.855)
P: (36.559,-24.300,37.329)
C4': (34.375,-25.202,34.205)
C2': (32.956,-26.406,35.680)
C2: (33.408,-31.708,35.464)
N1: (34.160,-32.312,36.394)
N3: (33.382,-30.419,35.123)
N6: (35.766,-32.168,38.051)
N7: (35.830,-29.150,37.397)
N9: (34.498,-28.350,35.787)
O5': (35.304,-24.659,36.401)
O3': (32.018,-25.457,33.654)
OP1: (35.183,-33.533,47.853)
OP2: (35.950,-31.802,46.116)
C3': (40.717,-33.347,45.914)
C1': (39.832,-32.595,43.859)
C5': (38.277,-33.613,46.758)
O4': (38.861,-33.428,44.446)
C8: (38.752,-30.287,43.674)
O2': (42.078,-31.948,44.422)
C6: (37.714,-30.046,40.319)
C5: (38.181,-30.285,41.623)
C4: (38.779,-31.507,41.844)
P: (35.676,-33.210,46.500)
C4': (39.328,-33.940,45.713)
C2': (40.786,-32.161,44.963)
C2: (38.479,-32.160,39.761)
N1: (37.886,-31.017,39.402)
N3: (38.967,-32.495,40.949)
N6: (37.112,-28.911,39.951)
N7: (38.173,-29.523,42.780)
N9: (39.150,-31.499,43.167)
O5': (37.000,-34.078,46.295)
O3': (41.685,-34.308,45.556)
OP2: (35.950,-31.802,46.116)
C3': (40.717,-33.347,45.914)
C1': (39.832,-32.595,43.859)
C5': (38.277,-33.613,46.758)
O4': (38.861,-33.428,44.446)
C8: (38.752,-30.287,43.674)
O2': (42.078,-31.948,44.422)
C6: (37.714,-30.046,40.319)
C5: (38.181,-30.285,41.623)
C4: (38.779,-31.507,41.844)
P: (35.676,-33.210,46.500)
C4': (39.328,-33.940,45.713)
C2': (40.786,-32.161,44.963)
C2: (38.479,-32.160,39.761)
N1: (37.886,-31.017,39.402)
N3: (38.967,-32.495,40.949)
N6: (37.112,-28.911,39.951)
N7: (38.173,-29.523,42.780)
N9: (39.150,-31.499,43.167)
O5': (37.000,-34.078,46.295)
O3': (41.685,-34.308,45.556)
Image (generated by PyMOL):