Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y27:X52:X19
Extra
PDB:
ATOM 1 O3' A A 51 2.890 0.106 46.603 1.00 53.37 O
ATOM 2 P A A 52 1.661 -0.190 45.614 1.00 53.49 P
ATOM 3 OP1 A A 52 0.699 0.922 45.778 1.00 53.22 O
ATOM 4 OP2 A A 52 1.205 -1.587 45.803 1.00 53.75 O
ATOM 5 O5' A A 52 2.328 -0.061 44.162 1.00 53.34 O
ATOM 6 C5' A A 52 3.430 -0.883 43.766 1.00 53.56 C
ATOM 7 C4' A A 52 4.609 -0.028 43.333 1.00 54.01 C
ATOM 8 O4' A A 52 5.523 0.168 44.451 1.00 53.84 O
ATOM 9 C3' A A 52 5.516 -0.615 42.255 1.00 54.32 C
ATOM 10 O3' A A 52 5.003 -0.511 40.933 1.00 54.85 O
ATOM 11 C2' A A 52 6.757 0.242 42.461 1.00 54.14 C
ATOM 12 O2' A A 52 6.588 1.584 42.042 1.00 54.11 O
ATOM 13 C1' A A 52 6.863 0.124 43.980 1.00 53.94 C
ATOM 14 N9 A A 52 7.518 -1.133 44.368 1.00 53.86 N
ATOM 15 C8 A A 52 6.931 -2.245 44.912 1.00 53.74 C
ATOM 16 N7 A A 52 7.758 -3.234 45.145 1.00 53.70 N
ATOM 17 C5 A A 52 8.980 -2.750 44.714 1.00 53.83 C
ATOM 18 C6 A A 52 10.274 -3.320 44.688 1.00 53.79 C
ATOM 19 N6 A A 52 10.544 -4.555 45.127 1.00 53.70 N
ATOM 20 N1 A A 52 11.285 -2.570 44.193 1.00 53.78 N
ATOM 21 C2 A A 52 11.016 -1.331 43.756 1.00 53.76 C
ATOM 22 N3 A A 52 9.844 -0.690 43.731 1.00 53.73 N
ATOM 23 C4 A A 52 8.853 -1.458 44.228 1.00 53.86 C
ATOM 24 P U A 53 4.860 -1.837 40.041 1.00 55.60 P
ATOM 25 OP1 U A 53 3.657 -1.657 39.197 1.00 56.31 O
ATOM 26 OP2 U A 53 4.961 -3.019 40.926 1.00 55.27 O
ATOM 27 O5' U A 53 6.103 -1.800 39.030 1.00 55.68 O
TER
ATOM 1 O3' G B 18 3.331 -13.477 50.118 1.00 46.49 O
ATOM 2 P A B 19 4.280 -12.658 51.106 1.00 46.10 P
ATOM 3 OP1 A B 19 4.520 -13.486 52.311 1.00 46.21 O
ATOM 4 OP2 A B 19 3.728 -11.293 51.258 1.00 46.25 O
ATOM 5 O5' A B 19 5.636 -12.558 50.265 1.00 45.66 O
ATOM 6 C5' A B 19 6.461 -13.701 50.055 1.00 45.06 C
ATOM 7 C4' A B 19 7.733 -13.301 49.332 1.00 44.61 C
ATOM 8 O4' A B 19 7.394 -12.702 48.057 1.00 44.56 O
ATOM 9 C3' A B 19 8.568 -12.237 50.027 1.00 44.23 C
ATOM 10 O3' A B 19 9.408 -12.816 51.015 1.00 43.81 O
ATOM 11 C2' A B 19 9.357 -11.652 48.863 1.00 44.28 C
ATOM 12 O2' A B 19 10.480 -12.432 48.502 1.00 44.40 O
ATOM 13 C1' A B 19 8.327 -11.684 47.738 1.00 44.34 C
ATOM 14 N9 A B 19 7.624 -10.415 47.534 1.00 44.28 N
ATOM 15 C8 A B 19 6.315 -10.137 47.823 1.00 44.30 C
ATOM 16 N7 A B 19 5.948 -8.911 47.532 1.00 44.22 N
ATOM 17 C5 A B 19 7.098 -8.340 47.013 1.00 44.35 C
ATOM 18 C6 A B 19 7.378 -7.049 46.511 1.00 44.43 C
ATOM 19 N6 A B 19 6.469 -6.071 46.457 1.00 44.46 N
ATOM 20 N1 A B 19 8.630 -6.797 46.069 1.00 44.29 N
ATOM 21 C2 A B 19 9.541 -7.779 46.127 1.00 44.23 C
ATOM 22 N3 A B 19 9.399 -9.029 46.572 1.00 44.12 N
ATOM 23 C4 A B 19 8.142 -9.251 47.006 1.00 44.24 C
ATOM 24 P U B 20 9.616 -12.072 52.419 1.00 43.52 P
ATOM 25 OP1 U B 20 10.246 -13.035 53.350 1.00 43.75 O
ATOM 26 OP2 U B 20 8.350 -11.407 52.800 1.00 43.38 O
ATOM 27 O5' U B 20 10.689 -10.943 52.069 1.00 43.81 O
TER
ATOM 2 P A A 52 1.661 -0.190 45.614 1.00 53.49 P
ATOM 3 OP1 A A 52 0.699 0.922 45.778 1.00 53.22 O
ATOM 4 OP2 A A 52 1.205 -1.587 45.803 1.00 53.75 O
ATOM 5 O5' A A 52 2.328 -0.061 44.162 1.00 53.34 O
ATOM 6 C5' A A 52 3.430 -0.883 43.766 1.00 53.56 C
ATOM 7 C4' A A 52 4.609 -0.028 43.333 1.00 54.01 C
ATOM 8 O4' A A 52 5.523 0.168 44.451 1.00 53.84 O
ATOM 9 C3' A A 52 5.516 -0.615 42.255 1.00 54.32 C
ATOM 10 O3' A A 52 5.003 -0.511 40.933 1.00 54.85 O
ATOM 11 C2' A A 52 6.757 0.242 42.461 1.00 54.14 C
ATOM 12 O2' A A 52 6.588 1.584 42.042 1.00 54.11 O
ATOM 13 C1' A A 52 6.863 0.124 43.980 1.00 53.94 C
ATOM 14 N9 A A 52 7.518 -1.133 44.368 1.00 53.86 N
ATOM 15 C8 A A 52 6.931 -2.245 44.912 1.00 53.74 C
ATOM 16 N7 A A 52 7.758 -3.234 45.145 1.00 53.70 N
ATOM 17 C5 A A 52 8.980 -2.750 44.714 1.00 53.83 C
ATOM 18 C6 A A 52 10.274 -3.320 44.688 1.00 53.79 C
ATOM 19 N6 A A 52 10.544 -4.555 45.127 1.00 53.70 N
ATOM 20 N1 A A 52 11.285 -2.570 44.193 1.00 53.78 N
ATOM 21 C2 A A 52 11.016 -1.331 43.756 1.00 53.76 C
ATOM 22 N3 A A 52 9.844 -0.690 43.731 1.00 53.73 N
ATOM 23 C4 A A 52 8.853 -1.458 44.228 1.00 53.86 C
ATOM 24 P U A 53 4.860 -1.837 40.041 1.00 55.60 P
ATOM 25 OP1 U A 53 3.657 -1.657 39.197 1.00 56.31 O
ATOM 26 OP2 U A 53 4.961 -3.019 40.926 1.00 55.27 O
ATOM 27 O5' U A 53 6.103 -1.800 39.030 1.00 55.68 O
TER
ATOM 1 O3' G B 18 3.331 -13.477 50.118 1.00 46.49 O
ATOM 2 P A B 19 4.280 -12.658 51.106 1.00 46.10 P
ATOM 3 OP1 A B 19 4.520 -13.486 52.311 1.00 46.21 O
ATOM 4 OP2 A B 19 3.728 -11.293 51.258 1.00 46.25 O
ATOM 5 O5' A B 19 5.636 -12.558 50.265 1.00 45.66 O
ATOM 6 C5' A B 19 6.461 -13.701 50.055 1.00 45.06 C
ATOM 7 C4' A B 19 7.733 -13.301 49.332 1.00 44.61 C
ATOM 8 O4' A B 19 7.394 -12.702 48.057 1.00 44.56 O
ATOM 9 C3' A B 19 8.568 -12.237 50.027 1.00 44.23 C
ATOM 10 O3' A B 19 9.408 -12.816 51.015 1.00 43.81 O
ATOM 11 C2' A B 19 9.357 -11.652 48.863 1.00 44.28 C
ATOM 12 O2' A B 19 10.480 -12.432 48.502 1.00 44.40 O
ATOM 13 C1' A B 19 8.327 -11.684 47.738 1.00 44.34 C
ATOM 14 N9 A B 19 7.624 -10.415 47.534 1.00 44.28 N
ATOM 15 C8 A B 19 6.315 -10.137 47.823 1.00 44.30 C
ATOM 16 N7 A B 19 5.948 -8.911 47.532 1.00 44.22 N
ATOM 17 C5 A B 19 7.098 -8.340 47.013 1.00 44.35 C
ATOM 18 C6 A B 19 7.378 -7.049 46.511 1.00 44.43 C
ATOM 19 N6 A B 19 6.469 -6.071 46.457 1.00 44.46 N
ATOM 20 N1 A B 19 8.630 -6.797 46.069 1.00 44.29 N
ATOM 21 C2 A B 19 9.541 -7.779 46.127 1.00 44.23 C
ATOM 22 N3 A B 19 9.399 -9.029 46.572 1.00 44.12 N
ATOM 23 C4 A B 19 8.142 -9.251 47.006 1.00 44.24 C
ATOM 24 P U B 20 9.616 -12.072 52.419 1.00 43.52 P
ATOM 25 OP1 U B 20 10.246 -13.035 53.350 1.00 43.75 O
ATOM 26 OP2 U B 20 8.350 -11.407 52.800 1.00 43.38 O
ATOM 27 O5' U B 20 10.689 -10.943 52.069 1.00 43.81 O
TER
Atoms:
OP1: (0.699,0.922,45.778)
OP2: (1.205,-1.587,45.803)
C3': (5.516,-0.615,42.255)
C1': (6.863,0.124,43.980)
C5': (3.430,-0.883,43.766)
O4': (5.523,0.168,44.451)
C8: (6.931,-2.245,44.912)
O2': (6.588,1.584,42.042)
C6: (10.274,-3.320,44.688)
C5: (8.980,-2.750,44.714)
C4: (8.853,-1.458,44.228)
P: (1.661,-0.190,45.614)
C4': (4.609,-0.028,43.333)
C2': (6.757,0.242,42.461)
C2: (11.016,-1.331,43.756)
N1: (11.285,-2.570,44.193)
N3: (9.844,-0.690,43.731)
N6: (10.544,-4.555,45.127)
N7: (7.758,-3.234,45.145)
N9: (7.518,-1.133,44.368)
O5': (2.328,-0.061,44.162)
O3': (5.003,-0.511,40.933)
OP2: (1.205,-1.587,45.803)
C3': (5.516,-0.615,42.255)
C1': (6.863,0.124,43.980)
C5': (3.430,-0.883,43.766)
O4': (5.523,0.168,44.451)
C8: (6.931,-2.245,44.912)
O2': (6.588,1.584,42.042)
C6: (10.274,-3.320,44.688)
C5: (8.980,-2.750,44.714)
C4: (8.853,-1.458,44.228)
P: (1.661,-0.190,45.614)
C4': (4.609,-0.028,43.333)
C2': (6.757,0.242,42.461)
C2: (11.016,-1.331,43.756)
N1: (11.285,-2.570,44.193)
N3: (9.844,-0.690,43.731)
N6: (10.544,-4.555,45.127)
N7: (7.758,-3.234,45.145)
N9: (7.518,-1.133,44.368)
O5': (2.328,-0.061,44.162)
O3': (5.003,-0.511,40.933)
OP1: (4.520,-13.486,52.311)
OP2: (3.728,-11.293,51.258)
C3': (8.568,-12.237,50.027)
C1': (8.327,-11.684,47.738)
C5': (6.461,-13.701,50.055)
O4': (7.394,-12.702,48.057)
C8: (6.315,-10.137,47.823)
O2': (10.480,-12.432,48.502)
C6: (7.378,-7.049,46.511)
C5: (7.098,-8.340,47.013)
C4: (8.142,-9.251,47.006)
P: (4.280,-12.658,51.106)
C4': (7.733,-13.301,49.332)
C2': (9.357,-11.652,48.863)
C2: (9.541,-7.779,46.127)
N1: (8.630,-6.797,46.069)
N3: (9.399,-9.029,46.572)
N6: (6.469,-6.071,46.457)
N7: (5.948,-8.911,47.532)
N9: (7.624,-10.415,47.534)
O5': (5.636,-12.558,50.265)
O3': (9.408,-12.816,51.015)
OP2: (3.728,-11.293,51.258)
C3': (8.568,-12.237,50.027)
C1': (8.327,-11.684,47.738)
C5': (6.461,-13.701,50.055)
O4': (7.394,-12.702,48.057)
C8: (6.315,-10.137,47.823)
O2': (10.480,-12.432,48.502)
C6: (7.378,-7.049,46.511)
C5: (7.098,-8.340,47.013)
C4: (8.142,-9.251,47.006)
P: (4.280,-12.658,51.106)
C4': (7.733,-13.301,49.332)
C2': (9.357,-11.652,48.863)
C2: (9.541,-7.779,46.127)
N1: (8.630,-6.797,46.069)
N3: (9.399,-9.029,46.572)
N6: (6.469,-6.071,46.457)
N7: (5.948,-8.911,47.532)
N9: (7.624,-10.415,47.534)
O5': (5.636,-12.558,50.265)
O3': (9.408,-12.816,51.015)
Image (generated by PyMOL):