ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1848:A1899

Extra

PDB:
ATOM 1 O3' C A1847 124.111 122.397 96.239 1.00 55.83 O
ATOM 2 P U A1848 124.462 121.580 94.910 1.00 55.00 P
ATOM 3 OP1 U A1848 125.307 120.469 95.387 1.00 56.56 O
ATOM 4 OP2 U A1848 124.972 122.503 93.855 1.00 53.70 O
ATOM 5 O5' U A1848 123.056 120.987 94.461 1.00 56.46 O
ATOM 6 C5' U A1848 122.243 120.259 95.408 1.00 58.02 C
ATOM 7 C4' U A1848 120.860 120.023 94.855 1.00 58.95 C
ATOM 8 O4' U A1848 120.161 121.280 94.690 1.00 59.29 O
ATOM 9 C3' U A1848 120.857 119.401 93.474 1.00 59.43 C
ATOM 10 O3' U A1848 120.966 118.000 93.578 1.00 59.19 O
ATOM 11 C2' U A1848 119.513 119.825 92.914 1.00 60.46 C
ATOM 12 O2' U A1848 118.461 118.990 93.358 1.00 62.45 O
ATOM 13 C1' U A1848 119.391 121.230 93.503 1.00 59.79 C
ATOM 14 N1 U A1848 119.859 122.289 92.598 1.00 59.33 N
ATOM 15 C2 U A1848 118.958 122.759 91.660 1.00 59.69 C
ATOM 16 O2 U A1848 117.858 122.258 91.488 1.00 59.93 O
ATOM 17 N3 U A1848 119.396 123.825 90.915 1.00 58.62 N
ATOM 18 C4 U A1848 120.617 124.429 90.979 1.00 58.38 C
ATOM 19 O4 U A1848 120.811 125.458 90.327 1.00 57.59 O
ATOM 20 C5 U A1848 121.519 123.844 91.925 1.00 59.14 C
ATOM 21 C6 U A1848 121.117 122.821 92.687 1.00 58.70 C
ATOM 22 P G A1849 121.610 117.177 92.378 1.00 60.46 P
ATOM 23 OP1 G A1849 122.749 118.012 91.902 1.00 59.73 O
ATOM 24 OP2 G A1849 120.521 116.817 91.428 1.00 60.87 O
ATOM 25 O5' G A1849 122.127 115.856 93.105 1.00 60.40 O
TER

ATOM 1 O3' C B1898 117.269 115.489 84.960 1.00 52.60 O
ATOM 2 P A B1899 118.076 116.182 86.177 1.00 52.01 P
ATOM 3 OP1 A B1899 119.445 116.409 85.672 1.00 52.88 O
ATOM 4 OP2 A B1899 117.867 115.429 87.451 1.00 51.58 O
ATOM 5 O5' A B1899 117.416 117.629 86.311 1.00 51.16 O
ATOM 6 C5' A B1899 116.006 117.767 86.610 1.00 52.77 C
ATOM 7 C4' A B1899 115.326 118.742 85.659 1.00 52.90 C
ATOM 8 O4' A B1899 115.562 120.109 86.067 1.00 53.45 O
ATOM 9 C3' A B1899 115.680 118.670 84.183 1.00 52.36 C
ATOM 10 O3' A B1899 114.560 119.017 83.407 1.00 51.59 O
ATOM 11 C2' A B1899 116.708 119.779 84.029 1.00 52.86 C
ATOM 12 O2' A B1899 116.641 120.394 82.760 1.00 52.24 O
ATOM 13 C1' A B1899 116.232 120.806 85.047 1.00 53.35 C
ATOM 14 N9 A B1899 117.363 121.484 85.668 1.00 55.98 N
ATOM 15 C8 A B1899 118.486 120.926 86.244 1.00 57.03 C
ATOM 16 N7 A B1899 119.316 121.805 86.739 1.00 57.25 N
ATOM 17 C5 A B1899 118.707 123.020 86.468 1.00 57.16 C
ATOM 18 C6 A B1899 119.083 124.335 86.737 1.00 57.51 C
ATOM 19 N6 A B1899 120.218 124.660 87.351 1.00 57.83 N
ATOM 20 N1 A B1899 118.244 125.324 86.347 1.00 57.09 N
ATOM 21 C2 A B1899 117.110 124.994 85.721 1.00 56.95 C
ATOM 22 N3 A B1899 116.653 123.794 85.400 1.00 57.42 N
ATOM 23 C4 A B1899 117.506 122.837 85.808 1.00 56.84 C
ATOM 24 P A B1900 114.549 118.679 81.840 1.00 50.31 P
ATOM 25 OP1 A B1900 115.941 118.493 81.368 1.00 50.30 O
ATOM 26 OP2 A B1900 113.700 119.709 81.183 1.00 50.11 O
ATOM 27 O5' A B1900 113.842 117.250 81.825 1.00 51.90 O
TER

Atoms:
C4: (120.617,124.429,90.979)
N3: (119.396,123.825,90.915)
OP1: (125.307,120.469,95.387)
OP2: (124.972,122.503,93.855)
C2: (118.958,122.759,91.660)
C1': (119.391,121.230,93.503)
C3': (120.857,119.401,93.474)
O5': (123.056,120.987,94.461)
O4': (120.161,121.280,94.690)
C5': (122.243,120.259,95.408)
P: (124.462,121.580,94.910)
C4': (120.860,120.023,94.855)
C2': (119.513,119.825,92.914)
O2': (118.461,118.990,93.358)
N1: (119.859,122.289,92.598)
O4: (120.811,125.458,90.327)
O2: (117.858,122.258,91.488)
C6: (121.117,122.821,92.687)
C5: (121.519,123.844,91.925)
O3': (120.966,118.000,93.578)
OP1: (119.445,116.409,85.672)
OP2: (117.867,115.429,87.451)
C3': (115.680,118.670,84.183)
C1': (116.232,120.806,85.047)
C5': (116.006,117.767,86.610)
O4': (115.562,120.109,86.067)
C8: (118.486,120.926,86.244)
O2': (116.641,120.394,82.760)
C6: (119.083,124.335,86.737)
C5: (118.707,123.020,86.468)
C4: (117.506,122.837,85.808)
P: (118.076,116.182,86.177)
C4': (115.326,118.742,85.659)
C2': (116.708,119.779,84.029)
C2: (117.110,124.994,85.721)
N1: (118.244,125.324,86.347)
N3: (116.653,123.794,85.400)
N6: (120.218,124.660,87.351)
N7: (119.316,121.805,86.739)
N9: (117.363,121.484,85.668)
O5': (117.416,117.629,86.311)
O3': (114.560,119.017,83.407)
Image (generated by PyMOL):
PyMOL image
show in jmol