ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:01848:01899

Extra

PDB:
ATOM 1 O3' C A1847 124.086 122.057 95.954 1.00 52.28 O
ATOM 2 P U A1848 124.482 121.197 94.659 1.00 54.73 P
ATOM 3 OP1 U A1848 125.390 120.108 95.107 1.00 56.66 O
ATOM 4 OP2 U A1848 124.908 122.123 93.572 1.00 51.92 O
ATOM 5 O5' U A1848 123.118 120.533 94.187 1.00 54.75 O
ATOM 6 C5' U A1848 122.267 119.837 95.108 1.00 53.28 C
ATOM 7 C4' U A1848 120.894 119.681 94.509 1.00 53.41 C
ATOM 8 O4' U A1848 120.291 120.988 94.335 1.00 53.55 O
ATOM 9 C3' U A1848 120.860 119.065 93.119 1.00 52.94 C
ATOM 10 O3' U A1848 120.881 117.646 93.209 1.00 52.83 O
ATOM 11 C2' U A1848 119.535 119.573 92.570 1.00 53.44 C
ATOM 12 O2' U A1848 118.427 118.832 93.042 1.00 55.44 O
ATOM 13 C1' U A1848 119.473 120.974 93.181 1.00 53.34 C
ATOM 14 N1 U A1848 119.889 122.058 92.279 1.00 52.91 N
ATOM 15 C2 U A1848 118.966 122.489 91.350 1.00 52.87 C
ATOM 16 O2 U A1848 117.871 121.978 91.220 1.00 54.16 O
ATOM 17 N3 U A1848 119.371 123.537 90.571 1.00 52.73 N
ATOM 18 C4 U A1848 120.576 124.177 90.612 1.00 51.54 C
ATOM 19 O4 U A1848 120.758 125.154 89.889 1.00 53.05 O
ATOM 20 C5 U A1848 121.494 123.658 91.575 1.00 51.57 C
ATOM 21 C6 U A1848 121.128 122.640 92.357 1.00 51.69 C
ATOM 22 P G A1849 121.526 116.773 92.029 1.00 53.50 P
ATOM 23 OP1 G A1849 122.675 117.524 91.466 1.00 53.03 O
ATOM 24 OP2 G A1849 120.446 116.311 91.123 1.00 54.54 O
ATOM 25 O5' G A1849 122.072 115.496 92.805 1.00 53.54 O
TER

ATOM 1 O3' C B1898 117.242 115.159 84.547 1.00 50.13 O
ATOM 2 P A B1899 118.046 115.792 85.785 1.00 49.11 P
ATOM 3 OP1 A B1899 119.446 115.973 85.324 1.00 52.39 O
ATOM 4 OP2 A B1899 117.773 115.028 87.029 1.00 47.38 O
ATOM 5 O5' A B1899 117.389 117.231 85.937 1.00 48.35 O
ATOM 6 C5' A B1899 115.987 117.349 86.205 1.00 49.18 C
ATOM 7 C4' A B1899 115.347 118.368 85.290 1.00 48.75 C
ATOM 8 O4' A B1899 115.650 119.714 85.745 1.00 49.64 O
ATOM 9 C3' A B1899 115.719 118.309 83.818 1.00 48.92 C
ATOM 10 O3' A B1899 114.559 118.585 83.063 1.00 51.11 O
ATOM 11 C2' A B1899 116.744 119.435 83.677 1.00 48.52 C
ATOM 12 O2' A B1899 116.734 120.044 82.401 1.00 46.55 O
ATOM 13 C1' A B1899 116.259 120.453 84.707 1.00 47.94 C
ATOM 14 N9 A B1899 117.371 121.203 85.296 1.00 50.89 N
ATOM 15 C8 A B1899 118.517 120.676 85.848 1.00 50.73 C
ATOM 16 N7 A B1899 119.347 121.578 86.308 1.00 50.93 N
ATOM 17 C5 A B1899 118.713 122.782 86.044 1.00 50.95 C
ATOM 18 C6 A B1899 119.082 124.110 86.290 1.00 51.24 C
ATOM 19 N6 A B1899 120.232 124.462 86.871 1.00 50.73 N
ATOM 20 N1 A B1899 118.222 125.080 85.914 1.00 51.07 N
ATOM 21 C2 A B1899 117.078 124.727 85.325 1.00 51.30 C
ATOM 22 N3 A B1899 116.622 123.514 85.030 1.00 52.88 N
ATOM 23 C4 A B1899 117.495 122.570 85.421 1.00 51.82 C
ATOM 24 P A B1900 114.493 118.166 81.517 1.00 50.93 P
ATOM 25 OP1 A B1900 115.836 117.979 80.927 1.00 50.75 O
ATOM 26 OP2 A B1900 113.561 119.145 80.911 1.00 52.13 O
ATOM 27 O5' A B1900 113.756 116.757 81.489 1.00 52.81 O
TER

Atoms:
C4: (120.576,124.177,90.612)
N3: (119.371,123.537,90.571)
OP1: (125.390,120.108,95.107)
OP2: (124.908,122.123,93.572)
C2: (118.966,122.489,91.350)
C1': (119.473,120.974,93.181)
C3': (120.860,119.065,93.119)
O5': (123.118,120.533,94.187)
O4': (120.291,120.988,94.335)
C5': (122.267,119.837,95.108)
P: (124.482,121.197,94.659)
C4': (120.894,119.681,94.509)
C2': (119.535,119.573,92.570)
O2': (118.427,118.832,93.042)
N1: (119.889,122.058,92.279)
O4: (120.758,125.154,89.889)
O2: (117.871,121.978,91.220)
C6: (121.128,122.640,92.357)
C5: (121.494,123.658,91.575)
O3': (120.881,117.646,93.209)
OP1: (119.446,115.973,85.324)
OP2: (117.773,115.028,87.029)
C3': (115.719,118.309,83.818)
C1': (116.259,120.453,84.707)
C5': (115.987,117.349,86.205)
O4': (115.650,119.714,85.745)
C8: (118.517,120.676,85.848)
O2': (116.734,120.044,82.401)
C6: (119.082,124.110,86.290)
C5: (118.713,122.782,86.044)
C4: (117.495,122.570,85.421)
P: (118.046,115.792,85.785)
C4': (115.347,118.368,85.290)
C2': (116.744,119.435,83.677)
C2: (117.078,124.727,85.325)
N1: (118.222,125.080,85.914)
N3: (116.622,123.514,85.030)
N6: (120.232,124.462,86.871)
N7: (119.347,121.578,86.308)
N9: (117.371,121.203,85.296)
O5': (117.389,117.231,85.937)
O3': (114.559,118.585,83.063)
Image (generated by PyMOL):
PyMOL image
show in jmol