Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01848:01899
Extra
PDB:
ATOM 1 O3' C A1847 123.917 122.291 95.927 1.00 47.73 O
ATOM 2 P U A1848 124.311 121.428 94.635 1.00 48.67 P
ATOM 3 OP1 U A1848 125.195 120.318 95.077 1.00 50.83 O
ATOM 4 OP2 U A1848 124.765 122.357 93.562 1.00 45.48 O
ATOM 5 O5' U A1848 122.937 120.788 94.158 1.00 49.35 O
ATOM 6 C5' U A1848 122.092 120.070 95.071 1.00 48.17 C
ATOM 7 C4' U A1848 120.718 119.901 94.469 1.00 47.89 C
ATOM 8 O4' U A1848 120.098 121.201 94.304 1.00 47.13 O
ATOM 9 C3' U A1848 120.694 119.286 93.078 1.00 47.52 C
ATOM 10 O3' U A1848 120.715 117.867 93.176 1.00 46.47 O
ATOM 11 C2' U A1848 119.373 119.795 92.517 1.00 48.32 C
ATOM 12 O2' U A1848 118.260 119.052 92.976 1.00 50.96 O
ATOM 13 C1' U A1848 119.303 121.195 93.132 1.00 48.03 C
ATOM 14 N1 U A1848 119.738 122.286 92.246 1.00 47.85 N
ATOM 15 C2 U A1848 118.834 122.736 91.302 1.00 47.50 C
ATOM 16 O2 U A1848 117.737 122.243 91.150 1.00 47.60 O
ATOM 17 N3 U A1848 119.267 123.783 90.534 1.00 48.13 N
ATOM 18 C4 U A1848 120.482 124.409 90.601 1.00 48.25 C
ATOM 19 O4 U A1848 120.702 125.371 89.866 1.00 50.41 O
ATOM 20 C5 U A1848 121.374 123.877 91.585 1.00 47.94 C
ATOM 21 C6 U A1848 120.983 122.859 92.354 1.00 47.57 C
ATOM 22 P G A1849 121.359 116.986 91.999 1.00 47.89 P
ATOM 23 OP1 G A1849 122.495 117.744 91.425 1.00 48.27 O
ATOM 24 OP2 G A1849 120.285 116.493 91.101 1.00 48.27 O
ATOM 25 O5' G A1849 121.922 115.721 92.782 1.00 48.70 O
TER
ATOM 1 O3' C B1898 117.102 115.345 84.527 1.00 45.12 O
ATOM 2 P A B1899 117.911 116.004 85.747 1.00 46.10 P
ATOM 3 OP1 A B1899 119.311 116.196 85.281 1.00 49.07 O
ATOM 4 OP2 A B1899 117.649 115.251 87.001 1.00 45.69 O
ATOM 5 O5' A B1899 117.240 117.438 85.895 1.00 44.94 O
ATOM 6 C5' A B1899 115.837 117.549 86.164 1.00 45.62 C
ATOM 7 C4' A B1899 115.204 118.590 85.273 1.00 44.90 C
ATOM 8 O4' A B1899 115.548 119.920 85.749 1.00 46.25 O
ATOM 9 C3' A B1899 115.578 118.543 83.799 1.00 44.92 C
ATOM 10 O3' A B1899 114.435 118.845 83.032 1.00 46.41 O
ATOM 11 C2' A B1899 116.618 119.657 83.671 1.00 45.48 C
ATOM 12 O2' A B1899 116.629 120.280 82.400 1.00 44.21 O
ATOM 13 C1' A B1899 116.141 120.667 84.710 1.00 45.54 C
ATOM 14 N9 A B1899 117.257 121.423 85.282 1.00 48.58 N
ATOM 15 C8 A B1899 118.425 120.911 85.798 1.00 48.65 C
ATOM 16 N7 A B1899 119.258 121.824 86.232 1.00 48.66 N
ATOM 17 C5 A B1899 118.599 123.019 85.990 1.00 48.57 C
ATOM 18 C6 A B1899 118.957 124.353 86.220 1.00 49.48 C
ATOM 19 N6 A B1899 120.125 124.723 86.754 1.00 49.03 N
ATOM 20 N1 A B1899 118.070 125.310 85.875 1.00 49.27 N
ATOM 21 C2 A B1899 116.912 124.941 85.328 1.00 48.19 C
ATOM 22 N3 A B1899 116.464 123.722 85.050 1.00 50.45 N
ATOM 23 C4 A B1899 117.364 122.791 85.411 1.00 49.39 C
ATOM 24 P A B1900 114.369 118.407 81.492 1.00 44.90 P
ATOM 25 OP1 A B1900 115.712 118.254 80.894 1.00 45.61 O
ATOM 26 OP2 A B1900 113.396 119.335 80.865 1.00 46.01 O
ATOM 27 O5' A B1900 113.687 116.971 81.480 1.00 48.28 O
TER
ATOM 2 P U A1848 124.311 121.428 94.635 1.00 48.67 P
ATOM 3 OP1 U A1848 125.195 120.318 95.077 1.00 50.83 O
ATOM 4 OP2 U A1848 124.765 122.357 93.562 1.00 45.48 O
ATOM 5 O5' U A1848 122.937 120.788 94.158 1.00 49.35 O
ATOM 6 C5' U A1848 122.092 120.070 95.071 1.00 48.17 C
ATOM 7 C4' U A1848 120.718 119.901 94.469 1.00 47.89 C
ATOM 8 O4' U A1848 120.098 121.201 94.304 1.00 47.13 O
ATOM 9 C3' U A1848 120.694 119.286 93.078 1.00 47.52 C
ATOM 10 O3' U A1848 120.715 117.867 93.176 1.00 46.47 O
ATOM 11 C2' U A1848 119.373 119.795 92.517 1.00 48.32 C
ATOM 12 O2' U A1848 118.260 119.052 92.976 1.00 50.96 O
ATOM 13 C1' U A1848 119.303 121.195 93.132 1.00 48.03 C
ATOM 14 N1 U A1848 119.738 122.286 92.246 1.00 47.85 N
ATOM 15 C2 U A1848 118.834 122.736 91.302 1.00 47.50 C
ATOM 16 O2 U A1848 117.737 122.243 91.150 1.00 47.60 O
ATOM 17 N3 U A1848 119.267 123.783 90.534 1.00 48.13 N
ATOM 18 C4 U A1848 120.482 124.409 90.601 1.00 48.25 C
ATOM 19 O4 U A1848 120.702 125.371 89.866 1.00 50.41 O
ATOM 20 C5 U A1848 121.374 123.877 91.585 1.00 47.94 C
ATOM 21 C6 U A1848 120.983 122.859 92.354 1.00 47.57 C
ATOM 22 P G A1849 121.359 116.986 91.999 1.00 47.89 P
ATOM 23 OP1 G A1849 122.495 117.744 91.425 1.00 48.27 O
ATOM 24 OP2 G A1849 120.285 116.493 91.101 1.00 48.27 O
ATOM 25 O5' G A1849 121.922 115.721 92.782 1.00 48.70 O
TER
ATOM 1 O3' C B1898 117.102 115.345 84.527 1.00 45.12 O
ATOM 2 P A B1899 117.911 116.004 85.747 1.00 46.10 P
ATOM 3 OP1 A B1899 119.311 116.196 85.281 1.00 49.07 O
ATOM 4 OP2 A B1899 117.649 115.251 87.001 1.00 45.69 O
ATOM 5 O5' A B1899 117.240 117.438 85.895 1.00 44.94 O
ATOM 6 C5' A B1899 115.837 117.549 86.164 1.00 45.62 C
ATOM 7 C4' A B1899 115.204 118.590 85.273 1.00 44.90 C
ATOM 8 O4' A B1899 115.548 119.920 85.749 1.00 46.25 O
ATOM 9 C3' A B1899 115.578 118.543 83.799 1.00 44.92 C
ATOM 10 O3' A B1899 114.435 118.845 83.032 1.00 46.41 O
ATOM 11 C2' A B1899 116.618 119.657 83.671 1.00 45.48 C
ATOM 12 O2' A B1899 116.629 120.280 82.400 1.00 44.21 O
ATOM 13 C1' A B1899 116.141 120.667 84.710 1.00 45.54 C
ATOM 14 N9 A B1899 117.257 121.423 85.282 1.00 48.58 N
ATOM 15 C8 A B1899 118.425 120.911 85.798 1.00 48.65 C
ATOM 16 N7 A B1899 119.258 121.824 86.232 1.00 48.66 N
ATOM 17 C5 A B1899 118.599 123.019 85.990 1.00 48.57 C
ATOM 18 C6 A B1899 118.957 124.353 86.220 1.00 49.48 C
ATOM 19 N6 A B1899 120.125 124.723 86.754 1.00 49.03 N
ATOM 20 N1 A B1899 118.070 125.310 85.875 1.00 49.27 N
ATOM 21 C2 A B1899 116.912 124.941 85.328 1.00 48.19 C
ATOM 22 N3 A B1899 116.464 123.722 85.050 1.00 50.45 N
ATOM 23 C4 A B1899 117.364 122.791 85.411 1.00 49.39 C
ATOM 24 P A B1900 114.369 118.407 81.492 1.00 44.90 P
ATOM 25 OP1 A B1900 115.712 118.254 80.894 1.00 45.61 O
ATOM 26 OP2 A B1900 113.396 119.335 80.865 1.00 46.01 O
ATOM 27 O5' A B1900 113.687 116.971 81.480 1.00 48.28 O
TER
Atoms:
C4: (120.482,124.409,90.601)
N3: (119.267,123.783,90.534)
OP1: (125.195,120.318,95.077)
OP2: (124.765,122.357,93.562)
C2: (118.834,122.736,91.302)
C1': (119.303,121.195,93.132)
C3': (120.694,119.286,93.078)
O5': (122.937,120.788,94.158)
O4': (120.098,121.201,94.304)
C5': (122.092,120.070,95.071)
P: (124.311,121.428,94.635)
C4': (120.718,119.901,94.469)
C2': (119.373,119.795,92.517)
O2': (118.260,119.052,92.976)
N1: (119.738,122.286,92.246)
O4: (120.702,125.371,89.866)
O2: (117.737,122.243,91.150)
C6: (120.983,122.859,92.354)
C5: (121.374,123.877,91.585)
O3': (120.715,117.867,93.176)
N3: (119.267,123.783,90.534)
OP1: (125.195,120.318,95.077)
OP2: (124.765,122.357,93.562)
C2: (118.834,122.736,91.302)
C1': (119.303,121.195,93.132)
C3': (120.694,119.286,93.078)
O5': (122.937,120.788,94.158)
O4': (120.098,121.201,94.304)
C5': (122.092,120.070,95.071)
P: (124.311,121.428,94.635)
C4': (120.718,119.901,94.469)
C2': (119.373,119.795,92.517)
O2': (118.260,119.052,92.976)
N1: (119.738,122.286,92.246)
O4: (120.702,125.371,89.866)
O2: (117.737,122.243,91.150)
C6: (120.983,122.859,92.354)
C5: (121.374,123.877,91.585)
O3': (120.715,117.867,93.176)
OP1: (119.311,116.196,85.281)
OP2: (117.649,115.251,87.001)
C3': (115.578,118.543,83.799)
C1': (116.141,120.667,84.710)
C5': (115.837,117.549,86.164)
O4': (115.548,119.920,85.749)
C8: (118.425,120.911,85.798)
O2': (116.629,120.280,82.400)
C6: (118.957,124.353,86.220)
C5: (118.599,123.019,85.990)
C4: (117.364,122.791,85.411)
P: (117.911,116.004,85.747)
C4': (115.204,118.590,85.273)
C2': (116.618,119.657,83.671)
C2: (116.912,124.941,85.328)
N1: (118.070,125.310,85.875)
N3: (116.464,123.722,85.050)
N6: (120.125,124.723,86.754)
N7: (119.258,121.824,86.232)
N9: (117.257,121.423,85.282)
O5': (117.240,117.438,85.895)
O3': (114.435,118.845,83.032)
OP2: (117.649,115.251,87.001)
C3': (115.578,118.543,83.799)
C1': (116.141,120.667,84.710)
C5': (115.837,117.549,86.164)
O4': (115.548,119.920,85.749)
C8: (118.425,120.911,85.798)
O2': (116.629,120.280,82.400)
C6: (118.957,124.353,86.220)
C5: (118.599,123.019,85.990)
C4: (117.364,122.791,85.411)
P: (117.911,116.004,85.747)
C4': (115.204,118.590,85.273)
C2': (116.618,119.657,83.671)
C2: (116.912,124.941,85.328)
N1: (118.070,125.310,85.875)
N3: (116.464,123.722,85.050)
N6: (120.125,124.723,86.754)
N7: (119.258,121.824,86.232)
N9: (117.257,121.423,85.282)
O5': (117.240,117.438,85.895)
O3': (114.435,118.845,83.032)
Image (generated by PyMOL):