Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A468:A463
Extra
PDB:
ATOM 1 O3' C A 467 52.593 -79.397 -42.866 1.00 31.91 O
ATOM 2 P A A 468 53.469 -80.650 -43.357 1.00 40.38 P
ATOM 3 OP1 A A 468 53.986 -81.330 -42.135 1.00 38.56 O
ATOM 4 OP2 A A 468 54.417 -80.155 -44.358 1.00 33.26 O
ATOM 5 O5' A A 468 52.396 -81.572 -44.060 1.00 39.25 O
ATOM 6 C5' A A 468 51.512 -81.045 -45.036 1.00 33.85 C
ATOM 7 C4' A A 468 50.863 -82.152 -45.794 1.00 35.69 C
ATOM 8 O4' A A 468 51.908 -83.006 -46.349 1.00 41.48 O
ATOM 9 C3' A A 468 50.008 -83.062 -44.944 1.00 38.44 C
ATOM 10 O3' A A 468 49.053 -83.690 -45.776 1.00 50.55 O
ATOM 11 C2' A A 468 51.019 -84.098 -44.487 1.00 36.86 C
ATOM 12 O2' A A 468 50.457 -85.309 -44.042 1.00 38.00 O
ATOM 13 C1' A A 468 51.840 -84.284 -45.759 1.00 37.47 C
ATOM 14 N9 A A 468 53.203 -84.740 -45.523 1.00 37.10 N
ATOM 15 C8 A A 468 54.052 -84.328 -44.535 1.00 39.39 C
ATOM 16 N7 A A 468 55.221 -84.925 -44.565 1.00 36.21 N
ATOM 17 C5 A A 468 55.130 -85.767 -45.640 1.00 33.73 C
ATOM 18 C6 A A 468 56.036 -86.665 -46.190 1.00 35.37 C
ATOM 19 N6 A A 468 57.255 -86.855 -45.713 1.00 43.12 N
ATOM 20 N1 A A 468 55.657 -87.377 -47.256 1.00 35.47 N
ATOM 21 C2 A A 468 54.423 -87.171 -47.725 1.00 37.57 C
ATOM 22 N3 A A 468 53.472 -86.335 -47.294 1.00 37.64 N
ATOM 23 C4 A A 468 53.897 -85.662 -46.234 1.00 34.77 C
ATOM 24 P C A 469 47.690 -82.956 -46.143 1.00 43.96 P
ATOM 25 OP1 C A 469 46.952 -83.879 -47.040 1.00 65.02 O
ATOM 26 OP2 C A 469 48.023 -81.618 -46.632 1.00 38.64 O
ATOM 27 O5' C A 469 46.960 -82.846 -44.734 1.00 43.25 O
TER
ATOM 1 O3' U B 462 63.882 -81.148 -37.936 1.00 34.31 O
ATOM 2 P A B 463 63.667 -80.233 -39.248 1.00 35.54 P
ATOM 3 OP1 A B 463 64.711 -79.182 -39.244 1.00 29.62 O
ATOM 4 OP2 A B 463 62.230 -79.814 -39.245 1.00 32.30 O
ATOM 5 O5' A B 463 63.940 -81.267 -40.425 1.00 23.95 O
ATOM 6 C5' A B 463 65.032 -82.156 -40.339 1.00 28.05 C
ATOM 7 C4' A B 463 65.265 -82.878 -41.632 1.00 34.43 C
ATOM 8 O4' A B 463 64.455 -84.082 -41.671 1.00 33.30 O
ATOM 9 C3' A B 463 64.887 -82.116 -42.883 1.00 29.91 C
ATOM 10 O3' A B 463 65.919 -81.269 -43.341 1.00 22.42 O
ATOM 11 C2' A B 463 64.537 -83.224 -43.853 1.00 30.32 C
ATOM 12 O2' A B 463 65.714 -83.810 -44.372 1.00 32.05 O
ATOM 13 C1' A B 463 63.863 -84.221 -42.925 1.00 28.07 C
ATOM 14 N9 A B 463 62.441 -83.928 -42.761 1.00 31.23 N
ATOM 15 C8 A B 463 61.880 -83.260 -41.694 1.00 32.10 C
ATOM 16 N7 A B 463 60.582 -83.129 -41.772 1.00 34.23 N
ATOM 17 C5 A B 463 60.300 -83.783 -42.968 1.00 32.94 C
ATOM 18 C6 A B 463 59.098 -84.006 -43.624 1.00 36.77 C
ATOM 19 N6 A B 463 57.944 -83.573 -43.109 1.00 36.25 N
ATOM 20 N1 A B 463 59.148 -84.675 -44.803 1.00 40.66 N
ATOM 21 C2 A B 463 60.332 -85.091 -45.264 1.00 33.17 C
ATOM 22 N3 A B 463 61.534 -84.941 -44.731 1.00 29.58 N
ATOM 23 C4 A B 463 61.427 -84.276 -43.587 1.00 30.31 C
ATOM 24 P G B 464 65.657 -80.276 -44.569 1.00 35.94 P
ATOM 25 OP1 G B 464 66.869 -80.305 -45.421 1.00 32.88 O
ATOM 26 OP2 G B 464 65.197 -78.970 -43.994 1.00 30.21 O
ATOM 27 O5' G B 464 64.469 -80.970 -45.348 1.00 33.39 O
TER
ATOM 2 P A A 468 53.469 -80.650 -43.357 1.00 40.38 P
ATOM 3 OP1 A A 468 53.986 -81.330 -42.135 1.00 38.56 O
ATOM 4 OP2 A A 468 54.417 -80.155 -44.358 1.00 33.26 O
ATOM 5 O5' A A 468 52.396 -81.572 -44.060 1.00 39.25 O
ATOM 6 C5' A A 468 51.512 -81.045 -45.036 1.00 33.85 C
ATOM 7 C4' A A 468 50.863 -82.152 -45.794 1.00 35.69 C
ATOM 8 O4' A A 468 51.908 -83.006 -46.349 1.00 41.48 O
ATOM 9 C3' A A 468 50.008 -83.062 -44.944 1.00 38.44 C
ATOM 10 O3' A A 468 49.053 -83.690 -45.776 1.00 50.55 O
ATOM 11 C2' A A 468 51.019 -84.098 -44.487 1.00 36.86 C
ATOM 12 O2' A A 468 50.457 -85.309 -44.042 1.00 38.00 O
ATOM 13 C1' A A 468 51.840 -84.284 -45.759 1.00 37.47 C
ATOM 14 N9 A A 468 53.203 -84.740 -45.523 1.00 37.10 N
ATOM 15 C8 A A 468 54.052 -84.328 -44.535 1.00 39.39 C
ATOM 16 N7 A A 468 55.221 -84.925 -44.565 1.00 36.21 N
ATOM 17 C5 A A 468 55.130 -85.767 -45.640 1.00 33.73 C
ATOM 18 C6 A A 468 56.036 -86.665 -46.190 1.00 35.37 C
ATOM 19 N6 A A 468 57.255 -86.855 -45.713 1.00 43.12 N
ATOM 20 N1 A A 468 55.657 -87.377 -47.256 1.00 35.47 N
ATOM 21 C2 A A 468 54.423 -87.171 -47.725 1.00 37.57 C
ATOM 22 N3 A A 468 53.472 -86.335 -47.294 1.00 37.64 N
ATOM 23 C4 A A 468 53.897 -85.662 -46.234 1.00 34.77 C
ATOM 24 P C A 469 47.690 -82.956 -46.143 1.00 43.96 P
ATOM 25 OP1 C A 469 46.952 -83.879 -47.040 1.00 65.02 O
ATOM 26 OP2 C A 469 48.023 -81.618 -46.632 1.00 38.64 O
ATOM 27 O5' C A 469 46.960 -82.846 -44.734 1.00 43.25 O
TER
ATOM 1 O3' U B 462 63.882 -81.148 -37.936 1.00 34.31 O
ATOM 2 P A B 463 63.667 -80.233 -39.248 1.00 35.54 P
ATOM 3 OP1 A B 463 64.711 -79.182 -39.244 1.00 29.62 O
ATOM 4 OP2 A B 463 62.230 -79.814 -39.245 1.00 32.30 O
ATOM 5 O5' A B 463 63.940 -81.267 -40.425 1.00 23.95 O
ATOM 6 C5' A B 463 65.032 -82.156 -40.339 1.00 28.05 C
ATOM 7 C4' A B 463 65.265 -82.878 -41.632 1.00 34.43 C
ATOM 8 O4' A B 463 64.455 -84.082 -41.671 1.00 33.30 O
ATOM 9 C3' A B 463 64.887 -82.116 -42.883 1.00 29.91 C
ATOM 10 O3' A B 463 65.919 -81.269 -43.341 1.00 22.42 O
ATOM 11 C2' A B 463 64.537 -83.224 -43.853 1.00 30.32 C
ATOM 12 O2' A B 463 65.714 -83.810 -44.372 1.00 32.05 O
ATOM 13 C1' A B 463 63.863 -84.221 -42.925 1.00 28.07 C
ATOM 14 N9 A B 463 62.441 -83.928 -42.761 1.00 31.23 N
ATOM 15 C8 A B 463 61.880 -83.260 -41.694 1.00 32.10 C
ATOM 16 N7 A B 463 60.582 -83.129 -41.772 1.00 34.23 N
ATOM 17 C5 A B 463 60.300 -83.783 -42.968 1.00 32.94 C
ATOM 18 C6 A B 463 59.098 -84.006 -43.624 1.00 36.77 C
ATOM 19 N6 A B 463 57.944 -83.573 -43.109 1.00 36.25 N
ATOM 20 N1 A B 463 59.148 -84.675 -44.803 1.00 40.66 N
ATOM 21 C2 A B 463 60.332 -85.091 -45.264 1.00 33.17 C
ATOM 22 N3 A B 463 61.534 -84.941 -44.731 1.00 29.58 N
ATOM 23 C4 A B 463 61.427 -84.276 -43.587 1.00 30.31 C
ATOM 24 P G B 464 65.657 -80.276 -44.569 1.00 35.94 P
ATOM 25 OP1 G B 464 66.869 -80.305 -45.421 1.00 32.88 O
ATOM 26 OP2 G B 464 65.197 -78.970 -43.994 1.00 30.21 O
ATOM 27 O5' G B 464 64.469 -80.970 -45.348 1.00 33.39 O
TER
Atoms:
OP1: (53.986,-81.330,-42.135)
OP2: (54.417,-80.155,-44.358)
C3': (50.008,-83.062,-44.944)
C1': (51.840,-84.284,-45.759)
C5': (51.512,-81.045,-45.036)
O4': (51.908,-83.006,-46.349)
C8: (54.052,-84.328,-44.535)
O2': (50.457,-85.309,-44.042)
C6: (56.036,-86.665,-46.190)
C5: (55.130,-85.767,-45.640)
C4: (53.897,-85.662,-46.234)
P: (53.469,-80.650,-43.357)
C4': (50.863,-82.152,-45.794)
C2': (51.019,-84.098,-44.487)
C2: (54.423,-87.171,-47.725)
N1: (55.657,-87.377,-47.256)
N3: (53.472,-86.335,-47.294)
N6: (57.255,-86.855,-45.713)
N7: (55.221,-84.925,-44.565)
N9: (53.203,-84.740,-45.523)
O5': (52.396,-81.572,-44.060)
O3': (49.053,-83.690,-45.776)
OP2: (54.417,-80.155,-44.358)
C3': (50.008,-83.062,-44.944)
C1': (51.840,-84.284,-45.759)
C5': (51.512,-81.045,-45.036)
O4': (51.908,-83.006,-46.349)
C8: (54.052,-84.328,-44.535)
O2': (50.457,-85.309,-44.042)
C6: (56.036,-86.665,-46.190)
C5: (55.130,-85.767,-45.640)
C4: (53.897,-85.662,-46.234)
P: (53.469,-80.650,-43.357)
C4': (50.863,-82.152,-45.794)
C2': (51.019,-84.098,-44.487)
C2: (54.423,-87.171,-47.725)
N1: (55.657,-87.377,-47.256)
N3: (53.472,-86.335,-47.294)
N6: (57.255,-86.855,-45.713)
N7: (55.221,-84.925,-44.565)
N9: (53.203,-84.740,-45.523)
O5': (52.396,-81.572,-44.060)
O3': (49.053,-83.690,-45.776)
OP1: (64.711,-79.182,-39.244)
OP2: (62.230,-79.814,-39.245)
C3': (64.887,-82.116,-42.883)
C1': (63.863,-84.221,-42.925)
C5': (65.032,-82.156,-40.339)
O4': (64.455,-84.082,-41.671)
C8: (61.880,-83.260,-41.694)
O2': (65.714,-83.810,-44.372)
C6: (59.098,-84.006,-43.624)
C5: (60.300,-83.783,-42.968)
C4: (61.427,-84.276,-43.587)
P: (63.667,-80.233,-39.248)
C4': (65.265,-82.878,-41.632)
C2': (64.537,-83.224,-43.853)
C2: (60.332,-85.091,-45.264)
N1: (59.148,-84.675,-44.803)
N3: (61.534,-84.941,-44.731)
N6: (57.944,-83.573,-43.109)
N7: (60.582,-83.129,-41.772)
N9: (62.441,-83.928,-42.761)
O5': (63.940,-81.267,-40.425)
O3': (65.919,-81.269,-43.341)
OP2: (62.230,-79.814,-39.245)
C3': (64.887,-82.116,-42.883)
C1': (63.863,-84.221,-42.925)
C5': (65.032,-82.156,-40.339)
O4': (64.455,-84.082,-41.671)
C8: (61.880,-83.260,-41.694)
O2': (65.714,-83.810,-44.372)
C6: (59.098,-84.006,-43.624)
C5: (60.300,-83.783,-42.968)
C4: (61.427,-84.276,-43.587)
P: (63.667,-80.233,-39.248)
C4': (65.265,-82.878,-41.632)
C2': (64.537,-83.224,-43.853)
C2: (60.332,-85.091,-45.264)
N1: (59.148,-84.675,-44.803)
N3: (61.534,-84.941,-44.731)
N6: (57.944,-83.573,-43.109)
N7: (60.582,-83.129,-41.772)
N9: (62.441,-83.928,-42.761)
O5': (63.940,-81.267,-40.425)
O3': (65.919,-81.269,-43.341)
Image (generated by PyMOL):