Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:52004:52054
Extra
PDB:
ATOM 1 O3' C A2003 203.678 -0.177 220.670 1.00 49.24 O
ATOM 2 P U A2004 203.729 -1.539 219.858 1.00 51.63 P
ATOM 3 OP1 U A2004 204.559 -2.467 220.644 1.00 51.73 O
ATOM 4 OP2 U A2004 204.125 -1.184 218.482 1.00 51.98 O
ATOM 5 O5' U A2004 202.220 -2.033 219.881 1.00 51.30 O
ATOM 6 C5' U A2004 201.604 -2.393 221.101 1.00 50.95 C
ATOM 7 C4' U A2004 200.126 -2.462 220.954 1.00 50.65 C
ATOM 8 O4' U A2004 199.662 -1.290 220.258 1.00 50.60 O
ATOM 9 C3' U A2004 199.588 -3.633 220.133 1.00 50.79 C
ATOM 10 O3' U A2004 199.456 -4.809 220.923 1.00 50.70 O
ATOM 11 C2' U A2004 198.250 -3.109 219.609 1.00 50.56 C
ATOM 12 O2' U A2004 197.219 -3.344 220.559 1.00 50.17 O
ATOM 13 C1' U A2004 198.481 -1.598 219.540 1.00 50.52 C
ATOM 14 N1 U A2004 198.591 -1.078 218.144 1.00 50.79 N
ATOM 15 C2 U A2004 197.451 -1.013 217.415 1.00 50.70 C
ATOM 16 O2 U A2004 196.429 -1.398 217.881 1.00 50.42 O
ATOM 17 N3 U A2004 197.526 -0.509 216.162 1.00 50.96 N
ATOM 18 C4 U A2004 198.643 -0.034 215.522 1.00 51.31 C
ATOM 19 O4 U A2004 198.596 0.409 214.360 1.00 51.53 O
ATOM 20 C5 U A2004 199.817 -0.115 216.332 1.00 51.39 C
ATOM 21 C6 U A2004 199.762 -0.608 217.576 1.00 51.14 C
ATOM 22 P G A2005 199.971 -6.224 220.389 1.00 52.94 P
ATOM 23 OP1 G A2005 200.873 -5.947 219.250 1.00 53.35 O
ATOM 24 OP2 G A2005 198.784 -7.058 220.157 1.00 52.81 O
ATOM 25 O5' G A2005 200.779 -6.802 221.632 1.00 52.93 O
TER
ATOM 1 O3' A B2053 193.815 -10.607 216.105 1.00 47.28 O
ATOM 2 P A B2054 194.875 -9.441 216.432 1.00 43.31 P
ATOM 3 OP1 A B2054 195.986 -9.574 215.473 1.00 43.76 O
ATOM 4 OP2 A B2054 195.167 -9.496 217.885 1.00 43.06 O
ATOM 5 O5' A B2054 194.069 -8.126 216.099 1.00 43.09 O
ATOM 6 C5' A B2054 192.665 -8.085 216.217 1.00 42.79 C
ATOM 7 C4' A B2054 192.051 -7.392 215.047 1.00 42.87 C
ATOM 8 O4' A B2054 192.622 -6.060 214.948 1.00 42.87 O
ATOM 9 C3' A B2054 192.308 -8.075 213.705 1.00 43.30 C
ATOM 10 O3' A B2054 191.138 -8.046 212.887 1.00 43.27 O
ATOM 11 C2' A B2054 193.375 -7.226 213.065 1.00 43.56 C
ATOM 12 O2' A B2054 193.302 -7.219 211.672 1.00 43.89 O
ATOM 13 C1' A B2054 193.076 -5.850 213.631 1.00 43.24 C
ATOM 14 N9 A B2054 194.231 -4.979 213.658 1.00 43.38 N
ATOM 15 C8 A B2054 195.411 -5.268 214.257 1.00 43.50 C
ATOM 16 N7 A B2054 196.335 -4.348 214.103 1.00 43.64 N
ATOM 17 C5 A B2054 195.714 -3.401 213.319 1.00 43.62 C
ATOM 18 C6 A B2054 196.164 -2.186 212.815 1.00 43.74 C
ATOM 19 N6 A B2054 197.342 -1.678 213.025 1.00 43.90 N
ATOM 20 N1 A B2054 195.313 -1.481 212.080 1.00 43.70 N
ATOM 21 C2 A B2054 194.076 -1.973 211.915 1.00 43.53 C
ATOM 22 N3 A B2054 193.544 -3.122 212.327 1.00 43.41 N
ATOM 23 C4 A B2054 194.418 -3.796 213.039 1.00 43.46 C
ATOM 24 P A B2055 190.443 -9.437 212.503 1.00 43.84 P
ATOM 25 OP1 A B2055 191.514 -10.280 211.960 1.00 44.26 O
ATOM 26 OP2 A B2055 189.269 -9.154 211.654 1.00 43.81 O
ATOM 27 O5' A B2055 189.952 -9.938 213.948 1.00 43.47 O
TER
ATOM 2 P U A2004 203.729 -1.539 219.858 1.00 51.63 P
ATOM 3 OP1 U A2004 204.559 -2.467 220.644 1.00 51.73 O
ATOM 4 OP2 U A2004 204.125 -1.184 218.482 1.00 51.98 O
ATOM 5 O5' U A2004 202.220 -2.033 219.881 1.00 51.30 O
ATOM 6 C5' U A2004 201.604 -2.393 221.101 1.00 50.95 C
ATOM 7 C4' U A2004 200.126 -2.462 220.954 1.00 50.65 C
ATOM 8 O4' U A2004 199.662 -1.290 220.258 1.00 50.60 O
ATOM 9 C3' U A2004 199.588 -3.633 220.133 1.00 50.79 C
ATOM 10 O3' U A2004 199.456 -4.809 220.923 1.00 50.70 O
ATOM 11 C2' U A2004 198.250 -3.109 219.609 1.00 50.56 C
ATOM 12 O2' U A2004 197.219 -3.344 220.559 1.00 50.17 O
ATOM 13 C1' U A2004 198.481 -1.598 219.540 1.00 50.52 C
ATOM 14 N1 U A2004 198.591 -1.078 218.144 1.00 50.79 N
ATOM 15 C2 U A2004 197.451 -1.013 217.415 1.00 50.70 C
ATOM 16 O2 U A2004 196.429 -1.398 217.881 1.00 50.42 O
ATOM 17 N3 U A2004 197.526 -0.509 216.162 1.00 50.96 N
ATOM 18 C4 U A2004 198.643 -0.034 215.522 1.00 51.31 C
ATOM 19 O4 U A2004 198.596 0.409 214.360 1.00 51.53 O
ATOM 20 C5 U A2004 199.817 -0.115 216.332 1.00 51.39 C
ATOM 21 C6 U A2004 199.762 -0.608 217.576 1.00 51.14 C
ATOM 22 P G A2005 199.971 -6.224 220.389 1.00 52.94 P
ATOM 23 OP1 G A2005 200.873 -5.947 219.250 1.00 53.35 O
ATOM 24 OP2 G A2005 198.784 -7.058 220.157 1.00 52.81 O
ATOM 25 O5' G A2005 200.779 -6.802 221.632 1.00 52.93 O
TER
ATOM 1 O3' A B2053 193.815 -10.607 216.105 1.00 47.28 O
ATOM 2 P A B2054 194.875 -9.441 216.432 1.00 43.31 P
ATOM 3 OP1 A B2054 195.986 -9.574 215.473 1.00 43.76 O
ATOM 4 OP2 A B2054 195.167 -9.496 217.885 1.00 43.06 O
ATOM 5 O5' A B2054 194.069 -8.126 216.099 1.00 43.09 O
ATOM 6 C5' A B2054 192.665 -8.085 216.217 1.00 42.79 C
ATOM 7 C4' A B2054 192.051 -7.392 215.047 1.00 42.87 C
ATOM 8 O4' A B2054 192.622 -6.060 214.948 1.00 42.87 O
ATOM 9 C3' A B2054 192.308 -8.075 213.705 1.00 43.30 C
ATOM 10 O3' A B2054 191.138 -8.046 212.887 1.00 43.27 O
ATOM 11 C2' A B2054 193.375 -7.226 213.065 1.00 43.56 C
ATOM 12 O2' A B2054 193.302 -7.219 211.672 1.00 43.89 O
ATOM 13 C1' A B2054 193.076 -5.850 213.631 1.00 43.24 C
ATOM 14 N9 A B2054 194.231 -4.979 213.658 1.00 43.38 N
ATOM 15 C8 A B2054 195.411 -5.268 214.257 1.00 43.50 C
ATOM 16 N7 A B2054 196.335 -4.348 214.103 1.00 43.64 N
ATOM 17 C5 A B2054 195.714 -3.401 213.319 1.00 43.62 C
ATOM 18 C6 A B2054 196.164 -2.186 212.815 1.00 43.74 C
ATOM 19 N6 A B2054 197.342 -1.678 213.025 1.00 43.90 N
ATOM 20 N1 A B2054 195.313 -1.481 212.080 1.00 43.70 N
ATOM 21 C2 A B2054 194.076 -1.973 211.915 1.00 43.53 C
ATOM 22 N3 A B2054 193.544 -3.122 212.327 1.00 43.41 N
ATOM 23 C4 A B2054 194.418 -3.796 213.039 1.00 43.46 C
ATOM 24 P A B2055 190.443 -9.437 212.503 1.00 43.84 P
ATOM 25 OP1 A B2055 191.514 -10.280 211.960 1.00 44.26 O
ATOM 26 OP2 A B2055 189.269 -9.154 211.654 1.00 43.81 O
ATOM 27 O5' A B2055 189.952 -9.938 213.948 1.00 43.47 O
TER
Atoms:
C4: (198.643,-0.034,215.522)
N3: (197.526,-0.509,216.162)
OP1: (204.559,-2.467,220.644)
OP2: (204.125,-1.184,218.482)
C2: (197.451,-1.013,217.415)
C1': (198.481,-1.598,219.540)
C3': (199.588,-3.633,220.133)
O5': (202.220,-2.033,219.881)
O4': (199.662,-1.290,220.258)
C5': (201.604,-2.393,221.101)
P: (203.729,-1.539,219.858)
C4': (200.126,-2.462,220.954)
C2': (198.250,-3.109,219.609)
O2': (197.219,-3.344,220.559)
N1: (198.591,-1.078,218.144)
O4: (198.596,0.409,214.360)
O2: (196.429,-1.398,217.881)
C6: (199.762,-0.608,217.576)
C5: (199.817,-0.115,216.332)
O3': (199.456,-4.809,220.923)
N3: (197.526,-0.509,216.162)
OP1: (204.559,-2.467,220.644)
OP2: (204.125,-1.184,218.482)
C2: (197.451,-1.013,217.415)
C1': (198.481,-1.598,219.540)
C3': (199.588,-3.633,220.133)
O5': (202.220,-2.033,219.881)
O4': (199.662,-1.290,220.258)
C5': (201.604,-2.393,221.101)
P: (203.729,-1.539,219.858)
C4': (200.126,-2.462,220.954)
C2': (198.250,-3.109,219.609)
O2': (197.219,-3.344,220.559)
N1: (198.591,-1.078,218.144)
O4: (198.596,0.409,214.360)
O2: (196.429,-1.398,217.881)
C6: (199.762,-0.608,217.576)
C5: (199.817,-0.115,216.332)
O3': (199.456,-4.809,220.923)
OP1: (195.986,-9.574,215.473)
OP2: (195.167,-9.496,217.885)
C3': (192.308,-8.075,213.705)
C1': (193.076,-5.850,213.631)
C5': (192.665,-8.085,216.217)
O4': (192.622,-6.060,214.948)
C8: (195.411,-5.268,214.257)
O2': (193.302,-7.219,211.672)
C6: (196.164,-2.186,212.815)
C5: (195.714,-3.401,213.319)
C4: (194.418,-3.796,213.039)
P: (194.875,-9.441,216.432)
C4': (192.051,-7.392,215.047)
C2': (193.375,-7.226,213.065)
C2: (194.076,-1.973,211.915)
N1: (195.313,-1.481,212.080)
N3: (193.544,-3.122,212.327)
N6: (197.342,-1.678,213.025)
N7: (196.335,-4.348,214.103)
N9: (194.231,-4.979,213.658)
O5': (194.069,-8.126,216.099)
O3': (191.138,-8.046,212.887)
OP2: (195.167,-9.496,217.885)
C3': (192.308,-8.075,213.705)
C1': (193.076,-5.850,213.631)
C5': (192.665,-8.085,216.217)
O4': (192.622,-6.060,214.948)
C8: (195.411,-5.268,214.257)
O2': (193.302,-7.219,211.672)
C6: (196.164,-2.186,212.815)
C5: (195.714,-3.401,213.319)
C4: (194.418,-3.796,213.039)
P: (194.875,-9.441,216.432)
C4': (192.051,-7.392,215.047)
C2': (193.375,-7.226,213.065)
C2: (194.076,-1.973,211.915)
N1: (195.313,-1.481,212.080)
N3: (193.544,-3.122,212.327)
N6: (197.342,-1.678,213.025)
N7: (196.335,-4.348,214.103)
N9: (194.231,-4.979,213.658)
O5': (194.069,-8.126,216.099)
O3': (191.138,-8.046,212.887)
Image (generated by PyMOL):