Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GER:A20:A49
Extra
PDB:
ATOM 1 O3' U A 19 45.002 16.399 16.770 1.00 17.64 O
ATOM 2 P A A 20 46.078 15.739 17.756 1.00 16.86 P
ATOM 3 OP1 A A 20 45.682 16.105 19.143 1.00 16.11 O
ATOM 4 OP2 A A 20 47.445 16.052 17.285 1.00 17.77 O
ATOM 5 O5' A A 20 45.845 14.182 17.543 1.00 15.88 O
ATOM 6 C5' A A 20 44.574 13.606 17.784 1.00 16.01 C
ATOM 7 C4' A A 20 44.666 12.105 17.704 1.00 16.47 C
ATOM 8 O4' A A 20 44.577 11.714 16.305 1.00 16.26 O
ATOM 9 C3' A A 20 46.000 11.553 18.184 1.00 15.70 C
ATOM 10 O3' A A 20 45.839 10.279 18.776 1.00 16.36 O
ATOM 11 C2' A A 20 46.862 11.552 16.923 1.00 16.37 C
ATOM 12 O2' A A 20 47.866 10.551 16.932 1.00 16.53 O
ATOM 13 C1' A A 20 45.830 11.242 15.841 1.00 16.64 C
ATOM 14 N9 A A 20 46.129 11.891 14.563 1.00 16.14 N
ATOM 15 C8 A A 20 45.893 13.195 14.208 1.00 16.52 C
ATOM 16 N7 A A 20 46.315 13.500 13.002 1.00 16.97 N
ATOM 17 C5 A A 20 46.861 12.316 12.530 1.00 16.87 C
ATOM 18 C6 A A 20 47.484 11.979 11.311 1.00 17.10 C
ATOM 19 N6 A A 20 47.689 12.850 10.316 1.00 17.38 N
ATOM 20 N1 A A 20 47.900 10.702 11.151 1.00 17.38 N
ATOM 21 C2 A A 20 47.708 9.836 12.153 1.00 18.03 C
ATOM 22 N3 A A 20 47.144 10.036 13.348 1.00 16.88 N
ATOM 23 C4 A A 20 46.739 11.311 13.474 1.00 15.96 C
ATOM 24 P U A 21 45.857 10.149 20.378 1.00 15.89 P
ATOM 25 OP1 U A 21 47.100 10.793 20.848 1.00 15.32 O
ATOM 26 OP2 U A 21 45.602 8.713 20.698 1.00 17.69 O
ATOM 27 O5' U A 21 44.626 11.043 20.854 1.00 16.01 O
TER
ATOM 1 O3' U B 48 50.896 21.214 10.866 1.00 35.07 O
ATOM 2 P A B 49 49.521 21.996 10.621 1.00 35.58 P
ATOM 3 OP1 A B 49 49.717 23.387 11.103 1.00 37.35 O
ATOM 4 OP2 A B 49 48.405 21.180 11.164 1.00 35.30 O
ATOM 5 O5' A B 49 49.385 22.056 9.036 1.00 34.33 O
ATOM 6 C5' A B 49 48.426 22.909 8.430 1.00 31.70 C
ATOM 7 C4' A B 49 47.633 22.155 7.392 1.00 30.21 C
ATOM 8 O4' A B 49 47.796 20.724 7.582 1.00 28.67 O
ATOM 9 C3' A B 49 46.134 22.399 7.436 1.00 29.23 C
ATOM 10 O3' A B 49 45.840 23.550 6.648 1.00 28.96 O
ATOM 11 C2' A B 49 45.582 21.117 6.816 1.00 27.98 C
ATOM 12 O2' A B 49 45.646 21.135 5.402 1.00 27.90 O
ATOM 13 C1' A B 49 46.563 20.067 7.346 1.00 27.28 C
ATOM 14 N9 A B 49 46.181 19.387 8.585 1.00 25.01 N
ATOM 15 C8 A B 49 45.628 19.919 9.724 1.00 24.12 C
ATOM 16 N7 A B 49 45.483 19.048 10.697 1.00 23.56 N
ATOM 17 C5 A B 49 45.960 17.861 10.157 1.00 22.71 C
ATOM 18 C6 A B 49 46.099 16.566 10.690 1.00 22.51 C
ATOM 19 N6 A B 49 45.775 16.240 11.948 1.00 22.07 N
ATOM 20 N1 A B 49 46.596 15.606 9.881 1.00 22.41 N
ATOM 21 C2 A B 49 46.939 15.936 8.629 1.00 23.08 C
ATOM 22 N3 A B 49 46.867 17.118 8.020 1.00 22.79 N
ATOM 23 C4 A B 49 46.366 18.049 8.848 1.00 23.33 C
ATOM 24 P A B 50 44.474 24.360 6.886 1.00 29.12 P
ATOM 25 OP1 A B 50 44.568 25.617 6.094 1.00 30.02 O
ATOM 26 OP2 A B 50 44.207 24.431 8.347 1.00 29.33 O
ATOM 27 O5' A B 50 43.364 23.438 6.207 1.00 26.89 O
TER
ATOM 2 P A A 20 46.078 15.739 17.756 1.00 16.86 P
ATOM 3 OP1 A A 20 45.682 16.105 19.143 1.00 16.11 O
ATOM 4 OP2 A A 20 47.445 16.052 17.285 1.00 17.77 O
ATOM 5 O5' A A 20 45.845 14.182 17.543 1.00 15.88 O
ATOM 6 C5' A A 20 44.574 13.606 17.784 1.00 16.01 C
ATOM 7 C4' A A 20 44.666 12.105 17.704 1.00 16.47 C
ATOM 8 O4' A A 20 44.577 11.714 16.305 1.00 16.26 O
ATOM 9 C3' A A 20 46.000 11.553 18.184 1.00 15.70 C
ATOM 10 O3' A A 20 45.839 10.279 18.776 1.00 16.36 O
ATOM 11 C2' A A 20 46.862 11.552 16.923 1.00 16.37 C
ATOM 12 O2' A A 20 47.866 10.551 16.932 1.00 16.53 O
ATOM 13 C1' A A 20 45.830 11.242 15.841 1.00 16.64 C
ATOM 14 N9 A A 20 46.129 11.891 14.563 1.00 16.14 N
ATOM 15 C8 A A 20 45.893 13.195 14.208 1.00 16.52 C
ATOM 16 N7 A A 20 46.315 13.500 13.002 1.00 16.97 N
ATOM 17 C5 A A 20 46.861 12.316 12.530 1.00 16.87 C
ATOM 18 C6 A A 20 47.484 11.979 11.311 1.00 17.10 C
ATOM 19 N6 A A 20 47.689 12.850 10.316 1.00 17.38 N
ATOM 20 N1 A A 20 47.900 10.702 11.151 1.00 17.38 N
ATOM 21 C2 A A 20 47.708 9.836 12.153 1.00 18.03 C
ATOM 22 N3 A A 20 47.144 10.036 13.348 1.00 16.88 N
ATOM 23 C4 A A 20 46.739 11.311 13.474 1.00 15.96 C
ATOM 24 P U A 21 45.857 10.149 20.378 1.00 15.89 P
ATOM 25 OP1 U A 21 47.100 10.793 20.848 1.00 15.32 O
ATOM 26 OP2 U A 21 45.602 8.713 20.698 1.00 17.69 O
ATOM 27 O5' U A 21 44.626 11.043 20.854 1.00 16.01 O
TER
ATOM 1 O3' U B 48 50.896 21.214 10.866 1.00 35.07 O
ATOM 2 P A B 49 49.521 21.996 10.621 1.00 35.58 P
ATOM 3 OP1 A B 49 49.717 23.387 11.103 1.00 37.35 O
ATOM 4 OP2 A B 49 48.405 21.180 11.164 1.00 35.30 O
ATOM 5 O5' A B 49 49.385 22.056 9.036 1.00 34.33 O
ATOM 6 C5' A B 49 48.426 22.909 8.430 1.00 31.70 C
ATOM 7 C4' A B 49 47.633 22.155 7.392 1.00 30.21 C
ATOM 8 O4' A B 49 47.796 20.724 7.582 1.00 28.67 O
ATOM 9 C3' A B 49 46.134 22.399 7.436 1.00 29.23 C
ATOM 10 O3' A B 49 45.840 23.550 6.648 1.00 28.96 O
ATOM 11 C2' A B 49 45.582 21.117 6.816 1.00 27.98 C
ATOM 12 O2' A B 49 45.646 21.135 5.402 1.00 27.90 O
ATOM 13 C1' A B 49 46.563 20.067 7.346 1.00 27.28 C
ATOM 14 N9 A B 49 46.181 19.387 8.585 1.00 25.01 N
ATOM 15 C8 A B 49 45.628 19.919 9.724 1.00 24.12 C
ATOM 16 N7 A B 49 45.483 19.048 10.697 1.00 23.56 N
ATOM 17 C5 A B 49 45.960 17.861 10.157 1.00 22.71 C
ATOM 18 C6 A B 49 46.099 16.566 10.690 1.00 22.51 C
ATOM 19 N6 A B 49 45.775 16.240 11.948 1.00 22.07 N
ATOM 20 N1 A B 49 46.596 15.606 9.881 1.00 22.41 N
ATOM 21 C2 A B 49 46.939 15.936 8.629 1.00 23.08 C
ATOM 22 N3 A B 49 46.867 17.118 8.020 1.00 22.79 N
ATOM 23 C4 A B 49 46.366 18.049 8.848 1.00 23.33 C
ATOM 24 P A B 50 44.474 24.360 6.886 1.00 29.12 P
ATOM 25 OP1 A B 50 44.568 25.617 6.094 1.00 30.02 O
ATOM 26 OP2 A B 50 44.207 24.431 8.347 1.00 29.33 O
ATOM 27 O5' A B 50 43.364 23.438 6.207 1.00 26.89 O
TER
Atoms:
OP1: (45.682,16.105,19.143)
OP2: (47.445,16.052,17.285)
C3': (46.000,11.553,18.184)
C1': (45.830,11.242,15.841)
C5': (44.574,13.606,17.784)
O4': (44.577,11.714,16.305)
C8: (45.893,13.195,14.208)
O2': (47.866,10.551,16.932)
C6: (47.484,11.979,11.311)
C5: (46.861,12.316,12.530)
C4: (46.739,11.311,13.474)
P: (46.078,15.739,17.756)
C4': (44.666,12.105,17.704)
C2': (46.862,11.552,16.923)
C2: (47.708,9.836,12.153)
N1: (47.900,10.702,11.151)
N3: (47.144,10.036,13.348)
N6: (47.689,12.850,10.316)
N7: (46.315,13.500,13.002)
N9: (46.129,11.891,14.563)
O5': (45.845,14.182,17.543)
O3': (45.839,10.279,18.776)
OP2: (47.445,16.052,17.285)
C3': (46.000,11.553,18.184)
C1': (45.830,11.242,15.841)
C5': (44.574,13.606,17.784)
O4': (44.577,11.714,16.305)
C8: (45.893,13.195,14.208)
O2': (47.866,10.551,16.932)
C6: (47.484,11.979,11.311)
C5: (46.861,12.316,12.530)
C4: (46.739,11.311,13.474)
P: (46.078,15.739,17.756)
C4': (44.666,12.105,17.704)
C2': (46.862,11.552,16.923)
C2: (47.708,9.836,12.153)
N1: (47.900,10.702,11.151)
N3: (47.144,10.036,13.348)
N6: (47.689,12.850,10.316)
N7: (46.315,13.500,13.002)
N9: (46.129,11.891,14.563)
O5': (45.845,14.182,17.543)
O3': (45.839,10.279,18.776)
OP1: (49.717,23.387,11.103)
OP2: (48.405,21.180,11.164)
C3': (46.134,22.399,7.436)
C1': (46.563,20.067,7.346)
C5': (48.426,22.909,8.430)
O4': (47.796,20.724,7.582)
C8: (45.628,19.919,9.724)
O2': (45.646,21.135,5.402)
C6: (46.099,16.566,10.690)
C5: (45.960,17.861,10.157)
C4: (46.366,18.049,8.848)
P: (49.521,21.996,10.621)
C4': (47.633,22.155,7.392)
C2': (45.582,21.117,6.816)
C2: (46.939,15.936,8.629)
N1: (46.596,15.606,9.881)
N3: (46.867,17.118,8.020)
N6: (45.775,16.240,11.948)
N7: (45.483,19.048,10.697)
N9: (46.181,19.387,8.585)
O5': (49.385,22.056,9.036)
O3': (45.840,23.550,6.648)
OP2: (48.405,21.180,11.164)
C3': (46.134,22.399,7.436)
C1': (46.563,20.067,7.346)
C5': (48.426,22.909,8.430)
O4': (47.796,20.724,7.582)
C8: (45.628,19.919,9.724)
O2': (45.646,21.135,5.402)
C6: (46.099,16.566,10.690)
C5: (45.960,17.861,10.157)
C4: (46.366,18.049,8.848)
P: (49.521,21.996,10.621)
C4': (47.633,22.155,7.392)
C2': (45.582,21.117,6.816)
C2: (46.939,15.936,8.629)
N1: (46.596,15.606,9.881)
N3: (46.867,17.118,8.020)
N6: (45.775,16.240,11.948)
N7: (45.483,19.048,10.697)
N9: (46.181,19.387,8.585)
O5': (49.385,22.056,9.036)
O3': (45.840,23.550,6.648)
Image (generated by PyMOL):