Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0129:0132
Extra
PDB:
ATOM 1 O3' G A 128 93.408 149.066 15.972 1.00 55.57 O
ATOM 2 P C A 129 92.815 148.379 17.291 1.00 54.32 P
ATOM 3 OP1 C A 129 93.517 148.951 18.469 1.00 52.58 O
ATOM 4 OP2 C A 129 92.833 146.905 17.065 1.00 55.34 O
ATOM 5 O5' C A 129 91.308 148.895 17.317 1.00 52.80 O
ATOM 6 C5' C A 129 90.321 148.214 18.084 1.00 50.46 C
ATOM 7 C4' C A 129 89.148 147.858 17.214 1.00 51.45 C
ATOM 8 O4' C A 129 88.638 146.569 17.631 1.00 52.82 O
ATOM 9 C3' C A 129 87.962 148.814 17.233 1.00 50.51 C
ATOM 10 O3' C A 129 87.286 148.690 15.981 1.00 52.57 O
ATOM 11 C2' C A 129 87.092 148.198 18.331 1.00 50.95 C
ATOM 12 O2' C A 129 85.724 148.530 18.217 1.00 47.49 O
ATOM 13 C1' C A 129 87.300 146.703 18.065 1.00 52.30 C
ATOM 14 N1 C A 129 87.107 145.767 19.192 1.00 53.51 N
ATOM 15 C2 C A 129 87.487 144.424 19.012 1.00 55.31 C
ATOM 16 O2 C A 129 87.941 144.063 17.907 1.00 56.81 O
ATOM 17 N3 C A 129 87.352 143.556 20.039 1.00 54.01 N
ATOM 18 C4 C A 129 86.856 143.972 21.201 1.00 52.24 C
ATOM 19 N4 C A 129 86.761 143.082 22.188 1.00 52.59 N
ATOM 20 C5 C A 129 86.441 145.321 21.405 1.00 52.37 C
ATOM 21 C6 C A 129 86.584 146.176 20.386 1.00 52.87 C
ATOM 22 P G A 130 87.112 149.962 15.009 1.00 53.92 P
ATOM 23 OP1 G A 130 88.378 150.112 14.235 1.00 51.70 O
ATOM 24 OP2 G A 130 86.568 151.115 15.782 1.00 52.21 O
ATOM 25 O5' G A 130 85.975 149.478 14.005 1.00 50.94 O
TER
ATOM 1 O3' C B 131 79.447 143.505 11.616 1.00 45.11 O
ATOM 2 P A B 132 78.367 143.247 12.775 1.00 48.93 P
ATOM 3 OP1 A B 132 77.010 143.222 12.153 1.00 46.91 O
ATOM 4 OP2 A B 132 78.634 144.169 13.919 1.00 45.32 O
ATOM 5 O5' A B 132 78.708 141.761 13.225 1.00 47.54 O
ATOM 6 C5' A B 132 78.521 141.337 14.573 1.00 45.64 C
ATOM 7 C4' A B 132 79.027 139.934 14.735 1.00 44.04 C
ATOM 8 O4' A B 132 80.456 139.906 14.481 1.00 43.68 O
ATOM 9 C3' A B 132 78.894 139.371 16.133 1.00 43.32 C
ATOM 10 O3' A B 132 77.580 138.892 16.374 1.00 41.60 O
ATOM 11 C2' A B 132 79.956 138.287 16.133 1.00 41.99 C
ATOM 12 O2' A B 132 79.528 137.158 15.404 1.00 41.76 O
ATOM 13 C1' A B 132 81.079 138.989 15.365 1.00 42.05 C
ATOM 14 N9 A B 132 81.989 139.755 16.220 1.00 41.52 N
ATOM 15 C8 A B 132 82.125 141.120 16.274 1.00 40.57 C
ATOM 16 N7 A B 132 83.055 141.528 17.101 1.00 40.22 N
ATOM 17 C5 A B 132 83.562 140.355 17.637 1.00 40.47 C
ATOM 18 C6 A B 132 84.590 140.104 18.569 1.00 40.80 C
ATOM 19 N6 A B 132 85.330 141.062 19.138 1.00 37.18 N
ATOM 20 N1 A B 132 84.839 138.815 18.892 1.00 41.08 N
ATOM 21 C2 A B 132 84.108 137.855 18.312 1.00 39.97 C
ATOM 22 N3 A B 132 83.127 137.964 17.419 1.00 40.32 N
ATOM 23 C4 A B 132 82.902 139.254 17.118 1.00 41.05 C
ATOM 24 P A B 133 76.917 139.109 17.819 1.00 43.90 P
ATOM 25 OP1 A B 133 75.470 138.835 17.688 1.00 41.90 O
ATOM 26 OP2 A B 133 77.372 140.412 18.380 1.00 43.22 O
ATOM 27 O5' A B 133 77.575 137.961 18.701 1.00 42.01 O
TER
ATOM 2 P C A 129 92.815 148.379 17.291 1.00 54.32 P
ATOM 3 OP1 C A 129 93.517 148.951 18.469 1.00 52.58 O
ATOM 4 OP2 C A 129 92.833 146.905 17.065 1.00 55.34 O
ATOM 5 O5' C A 129 91.308 148.895 17.317 1.00 52.80 O
ATOM 6 C5' C A 129 90.321 148.214 18.084 1.00 50.46 C
ATOM 7 C4' C A 129 89.148 147.858 17.214 1.00 51.45 C
ATOM 8 O4' C A 129 88.638 146.569 17.631 1.00 52.82 O
ATOM 9 C3' C A 129 87.962 148.814 17.233 1.00 50.51 C
ATOM 10 O3' C A 129 87.286 148.690 15.981 1.00 52.57 O
ATOM 11 C2' C A 129 87.092 148.198 18.331 1.00 50.95 C
ATOM 12 O2' C A 129 85.724 148.530 18.217 1.00 47.49 O
ATOM 13 C1' C A 129 87.300 146.703 18.065 1.00 52.30 C
ATOM 14 N1 C A 129 87.107 145.767 19.192 1.00 53.51 N
ATOM 15 C2 C A 129 87.487 144.424 19.012 1.00 55.31 C
ATOM 16 O2 C A 129 87.941 144.063 17.907 1.00 56.81 O
ATOM 17 N3 C A 129 87.352 143.556 20.039 1.00 54.01 N
ATOM 18 C4 C A 129 86.856 143.972 21.201 1.00 52.24 C
ATOM 19 N4 C A 129 86.761 143.082 22.188 1.00 52.59 N
ATOM 20 C5 C A 129 86.441 145.321 21.405 1.00 52.37 C
ATOM 21 C6 C A 129 86.584 146.176 20.386 1.00 52.87 C
ATOM 22 P G A 130 87.112 149.962 15.009 1.00 53.92 P
ATOM 23 OP1 G A 130 88.378 150.112 14.235 1.00 51.70 O
ATOM 24 OP2 G A 130 86.568 151.115 15.782 1.00 52.21 O
ATOM 25 O5' G A 130 85.975 149.478 14.005 1.00 50.94 O
TER
ATOM 1 O3' C B 131 79.447 143.505 11.616 1.00 45.11 O
ATOM 2 P A B 132 78.367 143.247 12.775 1.00 48.93 P
ATOM 3 OP1 A B 132 77.010 143.222 12.153 1.00 46.91 O
ATOM 4 OP2 A B 132 78.634 144.169 13.919 1.00 45.32 O
ATOM 5 O5' A B 132 78.708 141.761 13.225 1.00 47.54 O
ATOM 6 C5' A B 132 78.521 141.337 14.573 1.00 45.64 C
ATOM 7 C4' A B 132 79.027 139.934 14.735 1.00 44.04 C
ATOM 8 O4' A B 132 80.456 139.906 14.481 1.00 43.68 O
ATOM 9 C3' A B 132 78.894 139.371 16.133 1.00 43.32 C
ATOM 10 O3' A B 132 77.580 138.892 16.374 1.00 41.60 O
ATOM 11 C2' A B 132 79.956 138.287 16.133 1.00 41.99 C
ATOM 12 O2' A B 132 79.528 137.158 15.404 1.00 41.76 O
ATOM 13 C1' A B 132 81.079 138.989 15.365 1.00 42.05 C
ATOM 14 N9 A B 132 81.989 139.755 16.220 1.00 41.52 N
ATOM 15 C8 A B 132 82.125 141.120 16.274 1.00 40.57 C
ATOM 16 N7 A B 132 83.055 141.528 17.101 1.00 40.22 N
ATOM 17 C5 A B 132 83.562 140.355 17.637 1.00 40.47 C
ATOM 18 C6 A B 132 84.590 140.104 18.569 1.00 40.80 C
ATOM 19 N6 A B 132 85.330 141.062 19.138 1.00 37.18 N
ATOM 20 N1 A B 132 84.839 138.815 18.892 1.00 41.08 N
ATOM 21 C2 A B 132 84.108 137.855 18.312 1.00 39.97 C
ATOM 22 N3 A B 132 83.127 137.964 17.419 1.00 40.32 N
ATOM 23 C4 A B 132 82.902 139.254 17.118 1.00 41.05 C
ATOM 24 P A B 133 76.917 139.109 17.819 1.00 43.90 P
ATOM 25 OP1 A B 133 75.470 138.835 17.688 1.00 41.90 O
ATOM 26 OP2 A B 133 77.372 140.412 18.380 1.00 43.22 O
ATOM 27 O5' A B 133 77.575 137.961 18.701 1.00 42.01 O
TER
Atoms:
C2: (87.487,144.424,19.012)
OP1: (93.517,148.951,18.469)
OP2: (92.833,146.905,17.065)
C4: (86.856,143.972,21.201)
O5': (91.308,148.895,17.317)
C3': (87.962,148.814,17.233)
C1': (87.300,146.703,18.065)
O4': (88.638,146.569,17.631)
C5': (90.321,148.214,18.084)
P: (92.815,148.379,17.291)
O2: (87.941,144.063,17.907)
C4': (89.148,147.858,17.214)
C2': (87.092,148.198,18.331)
O2': (85.724,148.530,18.217)
N1: (87.107,145.767,19.192)
N3: (87.352,143.556,20.039)
N4: (86.761,143.082,22.188)
C6: (86.584,146.176,20.386)
C5: (86.441,145.321,21.405)
O3': (87.286,148.690,15.981)
OP1: (93.517,148.951,18.469)
OP2: (92.833,146.905,17.065)
C4: (86.856,143.972,21.201)
O5': (91.308,148.895,17.317)
C3': (87.962,148.814,17.233)
C1': (87.300,146.703,18.065)
O4': (88.638,146.569,17.631)
C5': (90.321,148.214,18.084)
P: (92.815,148.379,17.291)
O2: (87.941,144.063,17.907)
C4': (89.148,147.858,17.214)
C2': (87.092,148.198,18.331)
O2': (85.724,148.530,18.217)
N1: (87.107,145.767,19.192)
N3: (87.352,143.556,20.039)
N4: (86.761,143.082,22.188)
C6: (86.584,146.176,20.386)
C5: (86.441,145.321,21.405)
O3': (87.286,148.690,15.981)
OP1: (77.010,143.222,12.153)
OP2: (78.634,144.169,13.919)
C3': (78.894,139.371,16.133)
C1': (81.079,138.989,15.365)
C5': (78.521,141.337,14.573)
O4': (80.456,139.906,14.481)
C8: (82.125,141.120,16.274)
O2': (79.528,137.158,15.404)
C6: (84.590,140.104,18.569)
C5: (83.562,140.355,17.637)
C4: (82.902,139.254,17.118)
P: (78.367,143.247,12.775)
C4': (79.027,139.934,14.735)
C2': (79.956,138.287,16.133)
C2: (84.108,137.855,18.312)
N1: (84.839,138.815,18.892)
N3: (83.127,137.964,17.419)
N6: (85.330,141.062,19.138)
N7: (83.055,141.528,17.101)
N9: (81.989,139.755,16.220)
O5': (78.708,141.761,13.225)
O3': (77.580,138.892,16.374)
OP2: (78.634,144.169,13.919)
C3': (78.894,139.371,16.133)
C1': (81.079,138.989,15.365)
C5': (78.521,141.337,14.573)
O4': (80.456,139.906,14.481)
C8: (82.125,141.120,16.274)
O2': (79.528,137.158,15.404)
C6: (84.590,140.104,18.569)
C5: (83.562,140.355,17.637)
C4: (82.902,139.254,17.118)
P: (78.367,143.247,12.775)
C4': (79.027,139.934,14.735)
C2': (79.956,138.287,16.133)
C2: (84.108,137.855,18.312)
N1: (84.839,138.815,18.892)
N3: (83.127,137.964,17.419)
N6: (85.330,141.062,19.138)
N7: (83.055,141.528,17.101)
N9: (81.989,139.755,16.220)
O5': (78.708,141.761,13.225)
O3': (77.580,138.892,16.374)
Image (generated by PyMOL):