Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0129:0132
Extra
PDB:
ATOM 1 O3' G A 128 93.304 149.099 15.832 1.00 66.23 O
ATOM 2 P C A 129 92.783 148.370 17.154 1.00 63.35 P
ATOM 3 OP1 C A 129 93.633 148.834 18.277 1.00 61.86 O
ATOM 4 OP2 C A 129 92.686 146.916 16.858 1.00 62.72 O
ATOM 5 O5' C A 129 91.314 148.963 17.338 1.00 61.98 O
ATOM 6 C5' C A 129 90.331 148.247 18.092 1.00 59.31 C
ATOM 7 C4' C A 129 89.180 147.857 17.204 1.00 58.63 C
ATOM 8 O4' C A 129 88.671 146.576 17.635 1.00 60.42 O
ATOM 9 C3' C A 129 87.983 148.797 17.172 1.00 57.67 C
ATOM 10 O3' C A 129 87.341 148.645 15.904 1.00 57.29 O
ATOM 11 C2' C A 129 87.098 148.205 18.266 1.00 57.35 C
ATOM 12 O2' C A 129 85.731 148.517 18.107 1.00 54.54 O
ATOM 13 C1' C A 129 87.327 146.708 18.047 1.00 60.12 C
ATOM 14 N1 C A 129 87.129 145.803 19.202 1.00 62.75 N
ATOM 15 C2 C A 129 87.314 144.418 19.007 1.00 63.86 C
ATOM 16 O2 C A 129 87.614 143.997 17.868 1.00 64.54 O
ATOM 17 N3 C A 129 87.162 143.578 20.056 1.00 63.71 N
ATOM 18 C4 C A 129 86.836 144.060 21.255 1.00 63.51 C
ATOM 19 N4 C A 129 86.706 143.194 22.262 1.00 64.09 N
ATOM 20 C5 C A 129 86.629 145.453 21.478 1.00 63.78 C
ATOM 21 C6 C A 129 86.785 146.280 20.437 1.00 63.04 C
ATOM 22 P G A 130 87.135 149.915 14.937 1.00 54.91 P
ATOM 23 OP1 G A 130 88.384 150.100 14.150 1.00 54.66 O
ATOM 24 OP2 G A 130 86.579 151.044 15.730 1.00 54.15 O
ATOM 25 O5' G A 130 86.012 149.419 13.932 1.00 54.01 O
TER
ATOM 1 O3' C B 131 79.578 143.460 11.596 1.00 52.84 O
ATOM 2 P A B 132 78.511 143.236 12.768 1.00 55.30 P
ATOM 3 OP1 A B 132 77.154 143.354 12.166 1.00 55.37 O
ATOM 4 OP2 A B 132 78.887 144.111 13.919 1.00 52.85 O
ATOM 5 O5' A B 132 78.750 141.713 13.170 1.00 53.72 O
ATOM 6 C5' A B 132 78.568 141.266 14.525 1.00 51.76 C
ATOM 7 C4' A B 132 79.077 139.853 14.685 1.00 49.52 C
ATOM 8 O4' A B 132 80.505 139.815 14.422 1.00 47.74 O
ATOM 9 C3' A B 132 78.949 139.296 16.089 1.00 48.66 C
ATOM 10 O3' A B 132 77.648 138.796 16.347 1.00 48.06 O
ATOM 11 C2' A B 132 80.023 138.224 16.111 1.00 47.55 C
ATOM 12 O2' A B 132 79.617 137.043 15.454 1.00 46.80 O
ATOM 13 C1' A B 132 81.133 138.915 15.316 1.00 46.12 C
ATOM 14 N9 A B 132 82.021 139.701 16.166 1.00 45.76 N
ATOM 15 C8 A B 132 82.121 141.066 16.224 1.00 45.60 C
ATOM 16 N7 A B 132 83.026 141.494 17.067 1.00 46.74 N
ATOM 17 C5 A B 132 83.557 140.331 17.605 1.00 46.12 C
ATOM 18 C6 A B 132 84.572 140.101 18.553 1.00 46.51 C
ATOM 19 N6 A B 132 85.273 141.071 19.146 1.00 45.64 N
ATOM 20 N1 A B 132 84.850 138.822 18.871 1.00 46.63 N
ATOM 21 C2 A B 132 84.157 137.848 18.274 1.00 46.50 C
ATOM 22 N3 A B 132 83.190 137.936 17.367 1.00 46.68 N
ATOM 23 C4 A B 132 82.937 139.220 17.069 1.00 46.16 C
ATOM 24 P A B 133 77.033 138.933 17.823 1.00 49.79 P
ATOM 25 OP1 A B 133 75.606 138.552 17.732 1.00 48.89 O
ATOM 26 OP2 A B 133 77.408 140.264 18.398 1.00 49.25 O
ATOM 27 O5' A B 133 77.787 137.796 18.639 1.00 45.85 O
TER
ATOM 2 P C A 129 92.783 148.370 17.154 1.00 63.35 P
ATOM 3 OP1 C A 129 93.633 148.834 18.277 1.00 61.86 O
ATOM 4 OP2 C A 129 92.686 146.916 16.858 1.00 62.72 O
ATOM 5 O5' C A 129 91.314 148.963 17.338 1.00 61.98 O
ATOM 6 C5' C A 129 90.331 148.247 18.092 1.00 59.31 C
ATOM 7 C4' C A 129 89.180 147.857 17.204 1.00 58.63 C
ATOM 8 O4' C A 129 88.671 146.576 17.635 1.00 60.42 O
ATOM 9 C3' C A 129 87.983 148.797 17.172 1.00 57.67 C
ATOM 10 O3' C A 129 87.341 148.645 15.904 1.00 57.29 O
ATOM 11 C2' C A 129 87.098 148.205 18.266 1.00 57.35 C
ATOM 12 O2' C A 129 85.731 148.517 18.107 1.00 54.54 O
ATOM 13 C1' C A 129 87.327 146.708 18.047 1.00 60.12 C
ATOM 14 N1 C A 129 87.129 145.803 19.202 1.00 62.75 N
ATOM 15 C2 C A 129 87.314 144.418 19.007 1.00 63.86 C
ATOM 16 O2 C A 129 87.614 143.997 17.868 1.00 64.54 O
ATOM 17 N3 C A 129 87.162 143.578 20.056 1.00 63.71 N
ATOM 18 C4 C A 129 86.836 144.060 21.255 1.00 63.51 C
ATOM 19 N4 C A 129 86.706 143.194 22.262 1.00 64.09 N
ATOM 20 C5 C A 129 86.629 145.453 21.478 1.00 63.78 C
ATOM 21 C6 C A 129 86.785 146.280 20.437 1.00 63.04 C
ATOM 22 P G A 130 87.135 149.915 14.937 1.00 54.91 P
ATOM 23 OP1 G A 130 88.384 150.100 14.150 1.00 54.66 O
ATOM 24 OP2 G A 130 86.579 151.044 15.730 1.00 54.15 O
ATOM 25 O5' G A 130 86.012 149.419 13.932 1.00 54.01 O
TER
ATOM 1 O3' C B 131 79.578 143.460 11.596 1.00 52.84 O
ATOM 2 P A B 132 78.511 143.236 12.768 1.00 55.30 P
ATOM 3 OP1 A B 132 77.154 143.354 12.166 1.00 55.37 O
ATOM 4 OP2 A B 132 78.887 144.111 13.919 1.00 52.85 O
ATOM 5 O5' A B 132 78.750 141.713 13.170 1.00 53.72 O
ATOM 6 C5' A B 132 78.568 141.266 14.525 1.00 51.76 C
ATOM 7 C4' A B 132 79.077 139.853 14.685 1.00 49.52 C
ATOM 8 O4' A B 132 80.505 139.815 14.422 1.00 47.74 O
ATOM 9 C3' A B 132 78.949 139.296 16.089 1.00 48.66 C
ATOM 10 O3' A B 132 77.648 138.796 16.347 1.00 48.06 O
ATOM 11 C2' A B 132 80.023 138.224 16.111 1.00 47.55 C
ATOM 12 O2' A B 132 79.617 137.043 15.454 1.00 46.80 O
ATOM 13 C1' A B 132 81.133 138.915 15.316 1.00 46.12 C
ATOM 14 N9 A B 132 82.021 139.701 16.166 1.00 45.76 N
ATOM 15 C8 A B 132 82.121 141.066 16.224 1.00 45.60 C
ATOM 16 N7 A B 132 83.026 141.494 17.067 1.00 46.74 N
ATOM 17 C5 A B 132 83.557 140.331 17.605 1.00 46.12 C
ATOM 18 C6 A B 132 84.572 140.101 18.553 1.00 46.51 C
ATOM 19 N6 A B 132 85.273 141.071 19.146 1.00 45.64 N
ATOM 20 N1 A B 132 84.850 138.822 18.871 1.00 46.63 N
ATOM 21 C2 A B 132 84.157 137.848 18.274 1.00 46.50 C
ATOM 22 N3 A B 132 83.190 137.936 17.367 1.00 46.68 N
ATOM 23 C4 A B 132 82.937 139.220 17.069 1.00 46.16 C
ATOM 24 P A B 133 77.033 138.933 17.823 1.00 49.79 P
ATOM 25 OP1 A B 133 75.606 138.552 17.732 1.00 48.89 O
ATOM 26 OP2 A B 133 77.408 140.264 18.398 1.00 49.25 O
ATOM 27 O5' A B 133 77.787 137.796 18.639 1.00 45.85 O
TER
Atoms:
C2: (87.314,144.418,19.007)
OP1: (93.633,148.834,18.277)
OP2: (92.686,146.916,16.858)
C4: (86.836,144.060,21.255)
O5': (91.314,148.963,17.338)
C3': (87.983,148.797,17.172)
C1': (87.327,146.708,18.047)
O4': (88.671,146.576,17.635)
C5': (90.331,148.247,18.092)
P: (92.783,148.370,17.154)
O2: (87.614,143.997,17.868)
C4': (89.180,147.857,17.204)
C2': (87.098,148.205,18.266)
O2': (85.731,148.517,18.107)
N1: (87.129,145.803,19.202)
N3: (87.162,143.578,20.056)
N4: (86.706,143.194,22.262)
C6: (86.785,146.280,20.437)
C5: (86.629,145.453,21.478)
O3': (87.341,148.645,15.904)
OP1: (93.633,148.834,18.277)
OP2: (92.686,146.916,16.858)
C4: (86.836,144.060,21.255)
O5': (91.314,148.963,17.338)
C3': (87.983,148.797,17.172)
C1': (87.327,146.708,18.047)
O4': (88.671,146.576,17.635)
C5': (90.331,148.247,18.092)
P: (92.783,148.370,17.154)
O2: (87.614,143.997,17.868)
C4': (89.180,147.857,17.204)
C2': (87.098,148.205,18.266)
O2': (85.731,148.517,18.107)
N1: (87.129,145.803,19.202)
N3: (87.162,143.578,20.056)
N4: (86.706,143.194,22.262)
C6: (86.785,146.280,20.437)
C5: (86.629,145.453,21.478)
O3': (87.341,148.645,15.904)
OP1: (77.154,143.354,12.166)
OP2: (78.887,144.111,13.919)
C3': (78.949,139.296,16.089)
C1': (81.133,138.915,15.316)
C5': (78.568,141.266,14.525)
O4': (80.505,139.815,14.422)
C8: (82.121,141.066,16.224)
O2': (79.617,137.043,15.454)
C6: (84.572,140.101,18.553)
C5: (83.557,140.331,17.605)
C4: (82.937,139.220,17.069)
P: (78.511,143.236,12.768)
C4': (79.077,139.853,14.685)
C2': (80.023,138.224,16.111)
C2: (84.157,137.848,18.274)
N1: (84.850,138.822,18.871)
N3: (83.190,137.936,17.367)
N6: (85.273,141.071,19.146)
N7: (83.026,141.494,17.067)
N9: (82.021,139.701,16.166)
O5': (78.750,141.713,13.170)
O3': (77.648,138.796,16.347)
OP2: (78.887,144.111,13.919)
C3': (78.949,139.296,16.089)
C1': (81.133,138.915,15.316)
C5': (78.568,141.266,14.525)
O4': (80.505,139.815,14.422)
C8: (82.121,141.066,16.224)
O2': (79.617,137.043,15.454)
C6: (84.572,140.101,18.553)
C5: (83.557,140.331,17.605)
C4: (82.937,139.220,17.069)
P: (78.511,143.236,12.768)
C4': (79.077,139.853,14.685)
C2': (80.023,138.224,16.111)
C2: (84.157,137.848,18.274)
N1: (84.850,138.822,18.871)
N3: (83.190,137.936,17.367)
N6: (85.273,141.071,19.146)
N7: (83.026,141.494,17.067)
N9: (82.021,139.701,16.166)
O5': (78.750,141.713,13.170)
O3': (77.648,138.796,16.347)
Image (generated by PyMOL):