Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A280:A241
Extra
PDB:
ATOM 1 O3' G A 279 -3.326 75.903 101.051 1.00 31.79 O
ATOM 2 P A A 280 -3.424 74.541 101.918 1.00 27.41 P
ATOM 3 OP1 A A 280 -2.834 73.475 101.102 1.00 27.41 O
ATOM 4 OP2 A A 280 -4.843 74.403 102.362 1.00 27.41 O
ATOM 5 O5' A A 280 -2.486 74.819 103.175 1.00 27.41 O
ATOM 6 C5' A A 280 -1.431 73.926 103.501 1.00 27.41 C
ATOM 7 C4' A A 280 -0.325 74.624 104.253 1.00 27.41 C
ATOM 8 O4' A A 280 -0.001 75.876 103.585 1.00 27.41 O
ATOM 9 C3' A A 280 -0.647 75.032 105.684 1.00 27.41 C
ATOM 10 O3' A A 280 -0.454 73.989 106.623 1.00 27.41 O
ATOM 11 C2' A A 280 0.261 76.232 105.905 1.00 27.41 C
ATOM 12 O2' A A 280 1.592 75.826 106.159 1.00 27.41 O
ATOM 13 C1' A A 280 0.207 76.893 104.537 1.00 27.41 C
ATOM 14 N9 A A 280 -0.914 77.835 104.446 1.00 27.52 N
ATOM 15 C8 A A 280 -1.909 77.872 103.508 1.00 27.52 C
ATOM 16 N7 A A 280 -2.781 78.833 103.716 1.00 27.52 N
ATOM 17 C5 A A 280 -2.329 79.457 104.876 1.00 27.52 C
ATOM 18 C6 A A 280 -2.814 80.548 105.618 1.00 27.52 C
ATOM 19 N6 A A 280 -3.906 81.253 105.313 1.00 27.52 N
ATOM 20 N1 A A 280 -2.114 80.891 106.712 1.00 27.52 N
ATOM 21 C2 A A 280 -1.013 80.194 107.034 1.00 27.52 C
ATOM 22 N3 A A 280 -0.460 79.156 106.419 1.00 27.52 N
ATOM 23 C4 A A 280 -1.178 78.840 105.336 1.00 27.52 C
ATOM 24 P U A 281 -1.722 73.212 107.227 1.00 29.94 P
ATOM 25 OP1 U A 281 -1.203 72.024 107.921 1.00 29.94 O
ATOM 26 OP2 U A 281 -2.679 73.023 106.112 1.00 29.94 O
ATOM 27 O5' U A 281 -2.339 74.247 108.287 1.00 29.94 O
TER
ATOM 1 O3' G B 240 -14.495 80.295 98.941 1.00 39.24 O
ATOM 2 P A B 241 -13.411 81.062 98.024 1.00 32.70 P
ATOM 3 OP1 A B 241 -14.145 82.176 97.362 1.00 32.70 O
ATOM 4 OP2 A B 241 -12.740 80.038 97.179 1.00 32.70 O
ATOM 5 O5' A B 241 -12.370 81.642 99.088 1.00 32.70 O
ATOM 6 C5' A B 241 -12.834 82.213 100.295 1.00 32.70 C
ATOM 7 C4' A B 241 -12.060 83.437 100.664 1.00 32.70 C
ATOM 8 O4' A B 241 -10.843 83.036 101.319 1.00 32.70 O
ATOM 9 C3' A B 241 -11.650 84.318 99.506 1.00 32.70 C
ATOM 10 O3' A B 241 -11.625 85.677 99.934 1.00 32.70 O
ATOM 11 C2' A B 241 -10.237 83.853 99.206 1.00 32.70 C
ATOM 12 O2' A B 241 -9.432 84.839 98.599 1.00 32.70 O
ATOM 13 C1' A B 241 -9.724 83.489 100.594 1.00 32.70 C
ATOM 14 N9 A B 241 -8.744 82.406 100.612 1.00 32.26 N
ATOM 15 C8 A B 241 -8.607 81.367 99.736 1.00 32.26 C
ATOM 16 N7 A B 241 -7.665 80.522 100.078 1.00 32.26 N
ATOM 17 C5 A B 241 -7.168 81.022 101.263 1.00 32.26 C
ATOM 18 C6 A B 241 -6.151 80.576 102.111 1.00 32.26 C
ATOM 19 N6 A B 241 -5.421 79.481 101.893 1.00 32.26 N
ATOM 20 N1 A B 241 -5.908 81.306 103.214 1.00 32.26 N
ATOM 21 C2 A B 241 -6.640 82.405 103.432 1.00 32.26 C
ATOM 22 N3 A B 241 -7.612 82.933 102.696 1.00 32.26 N
ATOM 23 C4 A B 241 -7.830 82.178 101.610 1.00 32.26 C
ATOM 24 P U B 242 -12.874 86.637 99.623 1.00 21.39 P
ATOM 25 OP1 U B 242 -13.728 85.948 98.618 1.00 21.39 O
ATOM 26 OP2 U B 242 -12.322 87.961 99.295 1.00 21.39 O
ATOM 27 O5' U B 242 -13.639 86.700 101.012 1.00 21.39 O
TER
ATOM 2 P A A 280 -3.424 74.541 101.918 1.00 27.41 P
ATOM 3 OP1 A A 280 -2.834 73.475 101.102 1.00 27.41 O
ATOM 4 OP2 A A 280 -4.843 74.403 102.362 1.00 27.41 O
ATOM 5 O5' A A 280 -2.486 74.819 103.175 1.00 27.41 O
ATOM 6 C5' A A 280 -1.431 73.926 103.501 1.00 27.41 C
ATOM 7 C4' A A 280 -0.325 74.624 104.253 1.00 27.41 C
ATOM 8 O4' A A 280 -0.001 75.876 103.585 1.00 27.41 O
ATOM 9 C3' A A 280 -0.647 75.032 105.684 1.00 27.41 C
ATOM 10 O3' A A 280 -0.454 73.989 106.623 1.00 27.41 O
ATOM 11 C2' A A 280 0.261 76.232 105.905 1.00 27.41 C
ATOM 12 O2' A A 280 1.592 75.826 106.159 1.00 27.41 O
ATOM 13 C1' A A 280 0.207 76.893 104.537 1.00 27.41 C
ATOM 14 N9 A A 280 -0.914 77.835 104.446 1.00 27.52 N
ATOM 15 C8 A A 280 -1.909 77.872 103.508 1.00 27.52 C
ATOM 16 N7 A A 280 -2.781 78.833 103.716 1.00 27.52 N
ATOM 17 C5 A A 280 -2.329 79.457 104.876 1.00 27.52 C
ATOM 18 C6 A A 280 -2.814 80.548 105.618 1.00 27.52 C
ATOM 19 N6 A A 280 -3.906 81.253 105.313 1.00 27.52 N
ATOM 20 N1 A A 280 -2.114 80.891 106.712 1.00 27.52 N
ATOM 21 C2 A A 280 -1.013 80.194 107.034 1.00 27.52 C
ATOM 22 N3 A A 280 -0.460 79.156 106.419 1.00 27.52 N
ATOM 23 C4 A A 280 -1.178 78.840 105.336 1.00 27.52 C
ATOM 24 P U A 281 -1.722 73.212 107.227 1.00 29.94 P
ATOM 25 OP1 U A 281 -1.203 72.024 107.921 1.00 29.94 O
ATOM 26 OP2 U A 281 -2.679 73.023 106.112 1.00 29.94 O
ATOM 27 O5' U A 281 -2.339 74.247 108.287 1.00 29.94 O
TER
ATOM 1 O3' G B 240 -14.495 80.295 98.941 1.00 39.24 O
ATOM 2 P A B 241 -13.411 81.062 98.024 1.00 32.70 P
ATOM 3 OP1 A B 241 -14.145 82.176 97.362 1.00 32.70 O
ATOM 4 OP2 A B 241 -12.740 80.038 97.179 1.00 32.70 O
ATOM 5 O5' A B 241 -12.370 81.642 99.088 1.00 32.70 O
ATOM 6 C5' A B 241 -12.834 82.213 100.295 1.00 32.70 C
ATOM 7 C4' A B 241 -12.060 83.437 100.664 1.00 32.70 C
ATOM 8 O4' A B 241 -10.843 83.036 101.319 1.00 32.70 O
ATOM 9 C3' A B 241 -11.650 84.318 99.506 1.00 32.70 C
ATOM 10 O3' A B 241 -11.625 85.677 99.934 1.00 32.70 O
ATOM 11 C2' A B 241 -10.237 83.853 99.206 1.00 32.70 C
ATOM 12 O2' A B 241 -9.432 84.839 98.599 1.00 32.70 O
ATOM 13 C1' A B 241 -9.724 83.489 100.594 1.00 32.70 C
ATOM 14 N9 A B 241 -8.744 82.406 100.612 1.00 32.26 N
ATOM 15 C8 A B 241 -8.607 81.367 99.736 1.00 32.26 C
ATOM 16 N7 A B 241 -7.665 80.522 100.078 1.00 32.26 N
ATOM 17 C5 A B 241 -7.168 81.022 101.263 1.00 32.26 C
ATOM 18 C6 A B 241 -6.151 80.576 102.111 1.00 32.26 C
ATOM 19 N6 A B 241 -5.421 79.481 101.893 1.00 32.26 N
ATOM 20 N1 A B 241 -5.908 81.306 103.214 1.00 32.26 N
ATOM 21 C2 A B 241 -6.640 82.405 103.432 1.00 32.26 C
ATOM 22 N3 A B 241 -7.612 82.933 102.696 1.00 32.26 N
ATOM 23 C4 A B 241 -7.830 82.178 101.610 1.00 32.26 C
ATOM 24 P U B 242 -12.874 86.637 99.623 1.00 21.39 P
ATOM 25 OP1 U B 242 -13.728 85.948 98.618 1.00 21.39 O
ATOM 26 OP2 U B 242 -12.322 87.961 99.295 1.00 21.39 O
ATOM 27 O5' U B 242 -13.639 86.700 101.012 1.00 21.39 O
TER
Atoms:
OP1: (-2.834,73.475,101.102)
OP2: (-4.843,74.403,102.362)
C3': (-0.647,75.032,105.684)
C1': (0.207,76.893,104.537)
C5': (-1.431,73.926,103.501)
O4': (-0.001,75.876,103.585)
C8: (-1.909,77.872,103.508)
O2': (1.592,75.826,106.159)
C6: (-2.814,80.548,105.618)
C5: (-2.329,79.457,104.876)
C4: (-1.178,78.840,105.336)
P: (-3.424,74.541,101.918)
C4': (-0.325,74.624,104.253)
C2': (0.261,76.232,105.905)
C2: (-1.013,80.194,107.034)
N1: (-2.114,80.891,106.712)
N3: (-0.460,79.156,106.419)
N6: (-3.906,81.253,105.313)
N7: (-2.781,78.833,103.716)
N9: (-0.914,77.835,104.446)
O5': (-2.486,74.819,103.175)
O3': (-0.454,73.989,106.623)
OP2: (-4.843,74.403,102.362)
C3': (-0.647,75.032,105.684)
C1': (0.207,76.893,104.537)
C5': (-1.431,73.926,103.501)
O4': (-0.001,75.876,103.585)
C8: (-1.909,77.872,103.508)
O2': (1.592,75.826,106.159)
C6: (-2.814,80.548,105.618)
C5: (-2.329,79.457,104.876)
C4: (-1.178,78.840,105.336)
P: (-3.424,74.541,101.918)
C4': (-0.325,74.624,104.253)
C2': (0.261,76.232,105.905)
C2: (-1.013,80.194,107.034)
N1: (-2.114,80.891,106.712)
N3: (-0.460,79.156,106.419)
N6: (-3.906,81.253,105.313)
N7: (-2.781,78.833,103.716)
N9: (-0.914,77.835,104.446)
O5': (-2.486,74.819,103.175)
O3': (-0.454,73.989,106.623)
OP1: (-14.145,82.176,97.362)
OP2: (-12.740,80.038,97.179)
C3': (-11.650,84.318,99.506)
C1': (-9.724,83.489,100.594)
C5': (-12.834,82.213,100.295)
O4': (-10.843,83.036,101.319)
C8: (-8.607,81.367,99.736)
O2': (-9.432,84.839,98.599)
C6: (-6.151,80.576,102.111)
C5: (-7.168,81.022,101.263)
C4: (-7.830,82.178,101.610)
P: (-13.411,81.062,98.024)
C4': (-12.060,83.437,100.664)
C2': (-10.237,83.853,99.206)
C2: (-6.640,82.405,103.432)
N1: (-5.908,81.306,103.214)
N3: (-7.612,82.933,102.696)
N6: (-5.421,79.481,101.893)
N7: (-7.665,80.522,100.078)
N9: (-8.744,82.406,100.612)
O5': (-12.370,81.642,99.088)
O3': (-11.625,85.677,99.934)
OP2: (-12.740,80.038,97.179)
C3': (-11.650,84.318,99.506)
C1': (-9.724,83.489,100.594)
C5': (-12.834,82.213,100.295)
O4': (-10.843,83.036,101.319)
C8: (-8.607,81.367,99.736)
O2': (-9.432,84.839,98.599)
C6: (-6.151,80.576,102.111)
C5: (-7.168,81.022,101.263)
C4: (-7.830,82.178,101.610)
P: (-13.411,81.062,98.024)
C4': (-12.060,83.437,100.664)
C2': (-10.237,83.853,99.206)
C2: (-6.640,82.405,103.432)
N1: (-5.908,81.306,103.214)
N3: (-7.612,82.933,102.696)
N6: (-5.421,79.481,101.893)
N7: (-7.665,80.522,100.078)
N9: (-8.744,82.406,100.612)
O5': (-12.370,81.642,99.088)
O3': (-11.625,85.677,99.934)
Image (generated by PyMOL):