Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3L3C:Q99:Q120
Extra
PDB:
ATOM 1 O3' A A 98 6.676 29.010 31.793 1.00 59.57 O
ATOM 2 P A A 99 6.228 27.500 32.068 1.00 60.22 P
ATOM 3 OP1 A A 99 6.873 26.686 31.012 1.00 60.24 O
ATOM 4 OP2 A A 99 4.759 27.462 32.258 1.00 60.54 O
ATOM 5 O5' A A 99 6.874 27.148 33.489 1.00 60.08 O
ATOM 6 C5' A A 99 8.096 26.419 33.609 1.00 59.57 C
ATOM 7 C4' A A 99 8.833 26.842 34.867 1.00 58.85 C
ATOM 8 O4' A A 99 8.319 28.110 35.336 1.00 58.15 O
ATOM 9 C3' A A 99 8.633 25.966 36.090 1.00 58.81 C
ATOM 10 O3' A A 99 9.385 24.755 36.008 1.00 59.68 O
ATOM 11 C2' A A 99 9.155 26.908 37.171 1.00 58.21 C
ATOM 12 O2' A A 99 10.568 26.999 37.209 1.00 58.83 O
ATOM 13 C1' A A 99 8.549 28.231 36.723 1.00 57.36 C
ATOM 14 N9 A A 99 7.299 28.514 37.422 1.00 56.28 N
ATOM 15 C8 A A 99 6.017 28.332 36.976 1.00 55.72 C
ATOM 16 N7 A A 99 5.099 28.675 37.852 1.00 55.16 N
ATOM 17 C5 A A 99 5.828 29.101 38.949 1.00 54.94 C
ATOM 18 C6 A A 99 5.457 29.593 40.217 1.00 54.53 C
ATOM 19 N6 A A 99 4.190 29.743 40.607 1.00 54.47 N
ATOM 20 N1 A A 99 6.441 29.935 41.077 1.00 54.49 N
ATOM 21 C2 A A 99 7.715 29.791 40.696 1.00 54.49 C
ATOM 22 N3 A A 99 8.186 29.337 39.537 1.00 54.90 N
ATOM 23 C4 A A 99 7.185 29.010 38.700 1.00 55.41 C
ATOM 24 P U A 100 8.827 23.410 36.683 1.00 60.30 P
ATOM 25 OP1 U A 100 9.893 22.388 36.562 1.00 59.73 O
ATOM 26 OP2 U A 100 7.477 23.153 36.128 1.00 59.94 O
ATOM 27 O5' U A 100 8.645 23.784 38.232 1.00 60.82 O
TER
ATOM 1 O3' G B 119 -7.388 26.355 36.255 1.00 77.08 O
ATOM 2 P A B 120 -7.295 27.884 35.779 1.00 76.48 P
ATOM 3 OP1 A B 120 -8.650 28.469 35.909 1.00 76.52 O
ATOM 4 OP2 A B 120 -6.593 27.960 34.476 1.00 76.01 O
ATOM 5 O5' A B 120 -6.354 28.504 36.916 1.00 75.54 O
ATOM 6 C5' A B 120 -6.717 28.308 38.278 1.00 73.80 C
ATOM 7 C4' A B 120 -5.561 28.489 39.242 1.00 72.63 C
ATOM 8 O4' A B 120 -4.425 27.646 38.929 1.00 72.34 O
ATOM 9 C3' A B 120 -4.912 29.858 39.264 1.00 71.77 C
ATOM 10 O3' A B 120 -5.796 30.820 39.809 1.00 70.67 O
ATOM 11 C2' A B 120 -3.744 29.528 40.184 1.00 71.91 C
ATOM 12 O2' A B 120 -4.124 29.366 41.538 1.00 72.32 O
ATOM 13 C1' A B 120 -3.301 28.187 39.606 1.00 71.67 C
ATOM 14 N9 A B 120 -2.174 28.330 38.687 1.00 70.91 N
ATOM 15 C8 A B 120 -2.206 28.310 37.321 1.00 70.64 C
ATOM 16 N7 A B 120 -1.031 28.467 36.761 1.00 70.44 N
ATOM 17 C5 A B 120 -0.166 28.602 37.831 1.00 70.27 C
ATOM 18 C6 A B 120 1.230 28.798 37.912 1.00 69.99 C
ATOM 19 N6 A B 120 2.021 28.895 36.839 1.00 69.38 N
ATOM 20 N1 A B 120 1.783 28.894 39.143 1.00 70.02 N
ATOM 21 C2 A B 120 0.989 28.798 40.221 1.00 70.29 C
ATOM 22 N3 A B 120 -0.333 28.613 40.267 1.00 70.59 N
ATOM 23 C4 A B 120 -0.855 28.522 39.028 1.00 70.59 C
ATOM 24 P C B 121 -5.752 32.332 39.288 1.00 69.81 P
ATOM 25 OP1 C B 121 -7.033 32.975 39.660 1.00 70.01 O
ATOM 26 OP2 C B 121 -5.316 32.337 37.872 1.00 69.87 O
ATOM 27 O5' C B 121 -4.596 32.967 40.194 1.00 68.35 O
TER
ATOM 2 P A A 99 6.228 27.500 32.068 1.00 60.22 P
ATOM 3 OP1 A A 99 6.873 26.686 31.012 1.00 60.24 O
ATOM 4 OP2 A A 99 4.759 27.462 32.258 1.00 60.54 O
ATOM 5 O5' A A 99 6.874 27.148 33.489 1.00 60.08 O
ATOM 6 C5' A A 99 8.096 26.419 33.609 1.00 59.57 C
ATOM 7 C4' A A 99 8.833 26.842 34.867 1.00 58.85 C
ATOM 8 O4' A A 99 8.319 28.110 35.336 1.00 58.15 O
ATOM 9 C3' A A 99 8.633 25.966 36.090 1.00 58.81 C
ATOM 10 O3' A A 99 9.385 24.755 36.008 1.00 59.68 O
ATOM 11 C2' A A 99 9.155 26.908 37.171 1.00 58.21 C
ATOM 12 O2' A A 99 10.568 26.999 37.209 1.00 58.83 O
ATOM 13 C1' A A 99 8.549 28.231 36.723 1.00 57.36 C
ATOM 14 N9 A A 99 7.299 28.514 37.422 1.00 56.28 N
ATOM 15 C8 A A 99 6.017 28.332 36.976 1.00 55.72 C
ATOM 16 N7 A A 99 5.099 28.675 37.852 1.00 55.16 N
ATOM 17 C5 A A 99 5.828 29.101 38.949 1.00 54.94 C
ATOM 18 C6 A A 99 5.457 29.593 40.217 1.00 54.53 C
ATOM 19 N6 A A 99 4.190 29.743 40.607 1.00 54.47 N
ATOM 20 N1 A A 99 6.441 29.935 41.077 1.00 54.49 N
ATOM 21 C2 A A 99 7.715 29.791 40.696 1.00 54.49 C
ATOM 22 N3 A A 99 8.186 29.337 39.537 1.00 54.90 N
ATOM 23 C4 A A 99 7.185 29.010 38.700 1.00 55.41 C
ATOM 24 P U A 100 8.827 23.410 36.683 1.00 60.30 P
ATOM 25 OP1 U A 100 9.893 22.388 36.562 1.00 59.73 O
ATOM 26 OP2 U A 100 7.477 23.153 36.128 1.00 59.94 O
ATOM 27 O5' U A 100 8.645 23.784 38.232 1.00 60.82 O
TER
ATOM 1 O3' G B 119 -7.388 26.355 36.255 1.00 77.08 O
ATOM 2 P A B 120 -7.295 27.884 35.779 1.00 76.48 P
ATOM 3 OP1 A B 120 -8.650 28.469 35.909 1.00 76.52 O
ATOM 4 OP2 A B 120 -6.593 27.960 34.476 1.00 76.01 O
ATOM 5 O5' A B 120 -6.354 28.504 36.916 1.00 75.54 O
ATOM 6 C5' A B 120 -6.717 28.308 38.278 1.00 73.80 C
ATOM 7 C4' A B 120 -5.561 28.489 39.242 1.00 72.63 C
ATOM 8 O4' A B 120 -4.425 27.646 38.929 1.00 72.34 O
ATOM 9 C3' A B 120 -4.912 29.858 39.264 1.00 71.77 C
ATOM 10 O3' A B 120 -5.796 30.820 39.809 1.00 70.67 O
ATOM 11 C2' A B 120 -3.744 29.528 40.184 1.00 71.91 C
ATOM 12 O2' A B 120 -4.124 29.366 41.538 1.00 72.32 O
ATOM 13 C1' A B 120 -3.301 28.187 39.606 1.00 71.67 C
ATOM 14 N9 A B 120 -2.174 28.330 38.687 1.00 70.91 N
ATOM 15 C8 A B 120 -2.206 28.310 37.321 1.00 70.64 C
ATOM 16 N7 A B 120 -1.031 28.467 36.761 1.00 70.44 N
ATOM 17 C5 A B 120 -0.166 28.602 37.831 1.00 70.27 C
ATOM 18 C6 A B 120 1.230 28.798 37.912 1.00 69.99 C
ATOM 19 N6 A B 120 2.021 28.895 36.839 1.00 69.38 N
ATOM 20 N1 A B 120 1.783 28.894 39.143 1.00 70.02 N
ATOM 21 C2 A B 120 0.989 28.798 40.221 1.00 70.29 C
ATOM 22 N3 A B 120 -0.333 28.613 40.267 1.00 70.59 N
ATOM 23 C4 A B 120 -0.855 28.522 39.028 1.00 70.59 C
ATOM 24 P C B 121 -5.752 32.332 39.288 1.00 69.81 P
ATOM 25 OP1 C B 121 -7.033 32.975 39.660 1.00 70.01 O
ATOM 26 OP2 C B 121 -5.316 32.337 37.872 1.00 69.87 O
ATOM 27 O5' C B 121 -4.596 32.967 40.194 1.00 68.35 O
TER
Atoms:
OP1: (6.873,26.686,31.012)
OP2: (4.759,27.462,32.258)
C3': (8.633,25.966,36.090)
C1': (8.549,28.231,36.723)
C5': (8.096,26.419,33.609)
O4': (8.319,28.110,35.336)
C8: (6.017,28.332,36.976)
O2': (10.568,26.999,37.209)
C6: (5.457,29.593,40.217)
C5: (5.828,29.101,38.949)
C4: (7.185,29.010,38.700)
P: (6.228,27.500,32.068)
C4': (8.833,26.842,34.867)
C2': (9.155,26.908,37.171)
C2: (7.715,29.791,40.696)
N1: (6.441,29.935,41.077)
N3: (8.186,29.337,39.537)
N6: (4.190,29.743,40.607)
N7: (5.099,28.675,37.852)
N9: (7.299,28.514,37.422)
O5': (6.874,27.148,33.489)
O3': (9.385,24.755,36.008)
OP2: (4.759,27.462,32.258)
C3': (8.633,25.966,36.090)
C1': (8.549,28.231,36.723)
C5': (8.096,26.419,33.609)
O4': (8.319,28.110,35.336)
C8: (6.017,28.332,36.976)
O2': (10.568,26.999,37.209)
C6: (5.457,29.593,40.217)
C5: (5.828,29.101,38.949)
C4: (7.185,29.010,38.700)
P: (6.228,27.500,32.068)
C4': (8.833,26.842,34.867)
C2': (9.155,26.908,37.171)
C2: (7.715,29.791,40.696)
N1: (6.441,29.935,41.077)
N3: (8.186,29.337,39.537)
N6: (4.190,29.743,40.607)
N7: (5.099,28.675,37.852)
N9: (7.299,28.514,37.422)
O5': (6.874,27.148,33.489)
O3': (9.385,24.755,36.008)
OP1: (-8.650,28.469,35.909)
OP2: (-6.593,27.960,34.476)
C3': (-4.912,29.858,39.264)
C1': (-3.301,28.187,39.606)
C5': (-6.717,28.308,38.278)
O4': (-4.425,27.646,38.929)
C8: (-2.206,28.310,37.321)
O2': (-4.124,29.366,41.538)
C6: (1.230,28.798,37.912)
C5: (-0.166,28.602,37.831)
C4: (-0.855,28.522,39.028)
P: (-7.295,27.884,35.779)
C4': (-5.561,28.489,39.242)
C2': (-3.744,29.528,40.184)
C2: (0.989,28.798,40.221)
N1: (1.783,28.894,39.143)
N3: (-0.333,28.613,40.267)
N6: (2.021,28.895,36.839)
N7: (-1.031,28.467,36.761)
N9: (-2.174,28.330,38.687)
O5': (-6.354,28.504,36.916)
O3': (-5.796,30.820,39.809)
OP2: (-6.593,27.960,34.476)
C3': (-4.912,29.858,39.264)
C1': (-3.301,28.187,39.606)
C5': (-6.717,28.308,38.278)
O4': (-4.425,27.646,38.929)
C8: (-2.206,28.310,37.321)
O2': (-4.124,29.366,41.538)
C6: (1.230,28.798,37.912)
C5: (-0.166,28.602,37.831)
C4: (-0.855,28.522,39.028)
P: (-7.295,27.884,35.779)
C4': (-5.561,28.489,39.242)
C2': (-3.744,29.528,40.184)
C2: (0.989,28.798,40.221)
N1: (1.783,28.894,39.143)
N3: (-0.333,28.613,40.267)
N6: (2.021,28.895,36.839)
N7: (-1.031,28.467,36.761)
N9: (-2.174,28.330,38.687)
O5': (-6.354,28.504,36.916)
O3': (-5.796,30.820,39.809)
Image (generated by PyMOL):