Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GOT:A51:A18
Extra
PDB:
ATOM 1 O3' A A 50 -40.242 -21.129 3.919 1.00 30.72 O
ATOM 2 P A A 51 -38.928 -21.811 3.316 1.00 31.69 P
ATOM 3 OP1 A A 51 -39.247 -22.145 1.871 1.00 34.38 O
ATOM 4 OP2 A A 51 -38.391 -22.889 4.209 1.00 33.31 O
ATOM 5 O5' A A 51 -37.864 -20.625 3.253 1.00 31.23 O
ATOM 6 C5' A A 51 -37.567 -19.796 4.388 1.00 28.81 C
ATOM 7 C4' A A 51 -37.796 -18.337 4.020 1.00 25.49 C
ATOM 8 O4' A A 51 -39.173 -17.964 4.307 1.00 27.64 O
ATOM 9 C3' A A 51 -36.988 -17.325 4.804 1.00 24.30 C
ATOM 10 O3' A A 51 -35.677 -17.271 4.287 1.00 21.18 O
ATOM 11 C2' A A 51 -37.824 -16.075 4.565 1.00 25.65 C
ATOM 12 O2' A A 51 -37.791 -15.536 3.244 1.00 23.21 O
ATOM 13 C1' A A 51 -39.208 -16.641 4.828 1.00 25.56 C
ATOM 14 N9 A A 51 -39.416 -16.673 6.284 1.00 24.29 N
ATOM 15 C8 A A 51 -39.379 -17.684 7.228 1.00 25.14 C
ATOM 16 N7 A A 51 -39.531 -17.258 8.483 1.00 24.43 N
ATOM 17 C5 A A 51 -39.679 -15.882 8.337 1.00 23.19 C
ATOM 18 C6 A A 51 -39.827 -14.838 9.279 1.00 26.32 C
ATOM 19 N6 A A 51 -39.793 -15.053 10.644 1.00 21.96 N
ATOM 20 N1 A A 51 -39.978 -13.561 8.791 1.00 25.06 N
ATOM 21 C2 A A 51 -39.939 -13.373 7.461 1.00 26.49 C
ATOM 22 N3 A A 51 -39.765 -14.288 6.472 1.00 22.51 N
ATOM 23 C4 A A 51 -39.643 -15.519 6.986 1.00 24.70 C
ATOM 24 P U A 52 -34.423 -17.304 5.274 1.00 20.89 P
ATOM 25 OP1 U A 52 -33.204 -17.021 4.545 1.00 23.03 O
ATOM 26 OP2 U A 52 -34.566 -18.619 6.017 1.00 25.09 O
ATOM 27 O5' U A 52 -34.730 -16.123 6.315 1.00 22.00 O
TER
ATOM 1 O3' G B 17 -38.777 -25.694 17.284 1.00 28.17 O
ATOM 2 P A B 18 -40.261 -25.177 17.039 1.00 29.30 P
ATOM 3 OP1 A B 18 -41.000 -25.774 18.177 1.00 31.42 O
ATOM 4 OP2 A B 18 -40.746 -25.392 15.665 1.00 30.02 O
ATOM 5 O5' A B 18 -40.182 -23.602 17.228 1.00 26.12 O
ATOM 6 C5' A B 18 -39.626 -23.050 18.420 1.00 29.46 C
ATOM 7 C4' A B 18 -39.478 -21.553 18.274 1.00 27.38 C
ATOM 8 O4' A B 18 -38.491 -21.204 17.275 1.00 28.44 O
ATOM 9 C3' A B 18 -40.710 -20.803 17.837 1.00 29.15 C
ATOM 10 O3' A B 18 -41.598 -20.703 18.950 1.00 29.70 O
ATOM 11 C2' A B 18 -40.099 -19.459 17.409 1.00 28.75 C
ATOM 12 O2' A B 18 -39.676 -18.643 18.507 1.00 28.80 O
ATOM 13 C1' A B 18 -38.833 -19.941 16.699 1.00 27.12 C
ATOM 14 N9 A B 18 -39.011 -20.089 15.254 1.00 28.26 N
ATOM 15 C8 A B 18 -39.038 -21.229 14.490 1.00 27.44 C
ATOM 16 N7 A B 18 -39.192 -20.996 13.208 1.00 28.86 N
ATOM 17 C5 A B 18 -39.265 -19.618 13.121 1.00 25.18 C
ATOM 18 C6 A B 18 -39.421 -18.747 12.021 1.00 25.25 C
ATOM 19 N6 A B 18 -39.442 -19.156 10.751 1.00 21.49 N
ATOM 20 N1 A B 18 -39.531 -17.426 12.284 1.00 24.95 N
ATOM 21 C2 A B 18 -39.429 -17.015 13.563 1.00 26.43 C
ATOM 22 N3 A B 18 -39.234 -17.746 14.673 1.00 25.32 N
ATOM 23 C4 A B 18 -39.173 -19.047 14.374 1.00 25.77 C
ATOM 24 P U B 19 -43.182 -20.788 18.722 1.00 31.87 P
ATOM 25 OP1 U B 19 -43.818 -20.707 20.071 1.00 30.96 O
ATOM 26 OP2 U B 19 -43.512 -21.935 17.799 1.00 32.74 O
ATOM 27 O5' U B 19 -43.513 -19.442 17.919 1.00 27.91 O
TER
ATOM 2 P A A 51 -38.928 -21.811 3.316 1.00 31.69 P
ATOM 3 OP1 A A 51 -39.247 -22.145 1.871 1.00 34.38 O
ATOM 4 OP2 A A 51 -38.391 -22.889 4.209 1.00 33.31 O
ATOM 5 O5' A A 51 -37.864 -20.625 3.253 1.00 31.23 O
ATOM 6 C5' A A 51 -37.567 -19.796 4.388 1.00 28.81 C
ATOM 7 C4' A A 51 -37.796 -18.337 4.020 1.00 25.49 C
ATOM 8 O4' A A 51 -39.173 -17.964 4.307 1.00 27.64 O
ATOM 9 C3' A A 51 -36.988 -17.325 4.804 1.00 24.30 C
ATOM 10 O3' A A 51 -35.677 -17.271 4.287 1.00 21.18 O
ATOM 11 C2' A A 51 -37.824 -16.075 4.565 1.00 25.65 C
ATOM 12 O2' A A 51 -37.791 -15.536 3.244 1.00 23.21 O
ATOM 13 C1' A A 51 -39.208 -16.641 4.828 1.00 25.56 C
ATOM 14 N9 A A 51 -39.416 -16.673 6.284 1.00 24.29 N
ATOM 15 C8 A A 51 -39.379 -17.684 7.228 1.00 25.14 C
ATOM 16 N7 A A 51 -39.531 -17.258 8.483 1.00 24.43 N
ATOM 17 C5 A A 51 -39.679 -15.882 8.337 1.00 23.19 C
ATOM 18 C6 A A 51 -39.827 -14.838 9.279 1.00 26.32 C
ATOM 19 N6 A A 51 -39.793 -15.053 10.644 1.00 21.96 N
ATOM 20 N1 A A 51 -39.978 -13.561 8.791 1.00 25.06 N
ATOM 21 C2 A A 51 -39.939 -13.373 7.461 1.00 26.49 C
ATOM 22 N3 A A 51 -39.765 -14.288 6.472 1.00 22.51 N
ATOM 23 C4 A A 51 -39.643 -15.519 6.986 1.00 24.70 C
ATOM 24 P U A 52 -34.423 -17.304 5.274 1.00 20.89 P
ATOM 25 OP1 U A 52 -33.204 -17.021 4.545 1.00 23.03 O
ATOM 26 OP2 U A 52 -34.566 -18.619 6.017 1.00 25.09 O
ATOM 27 O5' U A 52 -34.730 -16.123 6.315 1.00 22.00 O
TER
ATOM 1 O3' G B 17 -38.777 -25.694 17.284 1.00 28.17 O
ATOM 2 P A B 18 -40.261 -25.177 17.039 1.00 29.30 P
ATOM 3 OP1 A B 18 -41.000 -25.774 18.177 1.00 31.42 O
ATOM 4 OP2 A B 18 -40.746 -25.392 15.665 1.00 30.02 O
ATOM 5 O5' A B 18 -40.182 -23.602 17.228 1.00 26.12 O
ATOM 6 C5' A B 18 -39.626 -23.050 18.420 1.00 29.46 C
ATOM 7 C4' A B 18 -39.478 -21.553 18.274 1.00 27.38 C
ATOM 8 O4' A B 18 -38.491 -21.204 17.275 1.00 28.44 O
ATOM 9 C3' A B 18 -40.710 -20.803 17.837 1.00 29.15 C
ATOM 10 O3' A B 18 -41.598 -20.703 18.950 1.00 29.70 O
ATOM 11 C2' A B 18 -40.099 -19.459 17.409 1.00 28.75 C
ATOM 12 O2' A B 18 -39.676 -18.643 18.507 1.00 28.80 O
ATOM 13 C1' A B 18 -38.833 -19.941 16.699 1.00 27.12 C
ATOM 14 N9 A B 18 -39.011 -20.089 15.254 1.00 28.26 N
ATOM 15 C8 A B 18 -39.038 -21.229 14.490 1.00 27.44 C
ATOM 16 N7 A B 18 -39.192 -20.996 13.208 1.00 28.86 N
ATOM 17 C5 A B 18 -39.265 -19.618 13.121 1.00 25.18 C
ATOM 18 C6 A B 18 -39.421 -18.747 12.021 1.00 25.25 C
ATOM 19 N6 A B 18 -39.442 -19.156 10.751 1.00 21.49 N
ATOM 20 N1 A B 18 -39.531 -17.426 12.284 1.00 24.95 N
ATOM 21 C2 A B 18 -39.429 -17.015 13.563 1.00 26.43 C
ATOM 22 N3 A B 18 -39.234 -17.746 14.673 1.00 25.32 N
ATOM 23 C4 A B 18 -39.173 -19.047 14.374 1.00 25.77 C
ATOM 24 P U B 19 -43.182 -20.788 18.722 1.00 31.87 P
ATOM 25 OP1 U B 19 -43.818 -20.707 20.071 1.00 30.96 O
ATOM 26 OP2 U B 19 -43.512 -21.935 17.799 1.00 32.74 O
ATOM 27 O5' U B 19 -43.513 -19.442 17.919 1.00 27.91 O
TER
Atoms:
OP1: (-39.247,-22.145,1.871)
OP2: (-38.391,-22.889,4.209)
C3': (-36.988,-17.325,4.804)
C1': (-39.208,-16.641,4.828)
C5': (-37.567,-19.796,4.388)
O4': (-39.173,-17.964,4.307)
C8: (-39.379,-17.684,7.228)
O2': (-37.791,-15.536,3.244)
C6: (-39.827,-14.838,9.279)
C5: (-39.679,-15.882,8.337)
C4: (-39.643,-15.519,6.986)
P: (-38.928,-21.811,3.316)
C4': (-37.796,-18.337,4.020)
C2': (-37.824,-16.075,4.565)
C2: (-39.939,-13.373,7.461)
N1: (-39.978,-13.561,8.791)
N3: (-39.765,-14.288,6.472)
N6: (-39.793,-15.053,10.644)
N7: (-39.531,-17.258,8.483)
N9: (-39.416,-16.673,6.284)
O5': (-37.864,-20.625,3.253)
O3': (-35.677,-17.271,4.287)
OP2: (-38.391,-22.889,4.209)
C3': (-36.988,-17.325,4.804)
C1': (-39.208,-16.641,4.828)
C5': (-37.567,-19.796,4.388)
O4': (-39.173,-17.964,4.307)
C8: (-39.379,-17.684,7.228)
O2': (-37.791,-15.536,3.244)
C6: (-39.827,-14.838,9.279)
C5: (-39.679,-15.882,8.337)
C4: (-39.643,-15.519,6.986)
P: (-38.928,-21.811,3.316)
C4': (-37.796,-18.337,4.020)
C2': (-37.824,-16.075,4.565)
C2: (-39.939,-13.373,7.461)
N1: (-39.978,-13.561,8.791)
N3: (-39.765,-14.288,6.472)
N6: (-39.793,-15.053,10.644)
N7: (-39.531,-17.258,8.483)
N9: (-39.416,-16.673,6.284)
O5': (-37.864,-20.625,3.253)
O3': (-35.677,-17.271,4.287)
OP1: (-41.000,-25.774,18.177)
OP2: (-40.746,-25.392,15.665)
C3': (-40.710,-20.803,17.837)
C1': (-38.833,-19.941,16.699)
C5': (-39.626,-23.050,18.420)
O4': (-38.491,-21.204,17.275)
C8: (-39.038,-21.229,14.490)
O2': (-39.676,-18.643,18.507)
C6: (-39.421,-18.747,12.021)
C5: (-39.265,-19.618,13.121)
C4: (-39.173,-19.047,14.374)
P: (-40.261,-25.177,17.039)
C4': (-39.478,-21.553,18.274)
C2': (-40.099,-19.459,17.409)
C2: (-39.429,-17.015,13.563)
N1: (-39.531,-17.426,12.284)
N3: (-39.234,-17.746,14.673)
N6: (-39.442,-19.156,10.751)
N7: (-39.192,-20.996,13.208)
N9: (-39.011,-20.089,15.254)
O5': (-40.182,-23.602,17.228)
O3': (-41.598,-20.703,18.950)
OP2: (-40.746,-25.392,15.665)
C3': (-40.710,-20.803,17.837)
C1': (-38.833,-19.941,16.699)
C5': (-39.626,-23.050,18.420)
O4': (-38.491,-21.204,17.275)
C8: (-39.038,-21.229,14.490)
O2': (-39.676,-18.643,18.507)
C6: (-39.421,-18.747,12.021)
C5: (-39.265,-19.618,13.121)
C4: (-39.173,-19.047,14.374)
P: (-40.261,-25.177,17.039)
C4': (-39.478,-21.553,18.274)
C2': (-40.099,-19.459,17.409)
C2: (-39.429,-17.015,13.563)
N1: (-39.531,-17.426,12.284)
N3: (-39.234,-17.746,14.673)
N6: (-39.442,-19.156,10.751)
N7: (-39.192,-20.996,13.208)
N9: (-39.011,-20.089,15.254)
O5': (-40.182,-23.602,17.228)
O3': (-41.598,-20.703,18.950)
Image (generated by PyMOL):