Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:5473:5519
Extra
PDB:
ATOM 1 O3' A A 472 96.383 -8.776 310.118 1.00 46.06 O
ATOM 2 P A A 473 95.703 -8.122 311.388 1.00 51.81 P
ATOM 3 OP1 A A 473 96.421 -8.629 312.597 1.00 52.06 O
ATOM 4 OP2 A A 473 94.248 -8.359 311.241 1.00 52.17 O
ATOM 5 O5' A A 473 96.014 -6.568 311.177 1.00 51.56 O
ATOM 6 C5' A A 473 95.048 -5.567 311.502 1.00 51.86 C
ATOM 7 C4' A A 473 95.374 -4.248 310.841 1.00 51.49 C
ATOM 8 O4' A A 473 94.930 -4.269 309.445 1.00 51.15 O
ATOM 9 C3' A A 473 94.713 -3.011 311.444 1.00 51.81 C
ATOM 10 O3' A A 473 95.445 -2.476 312.533 1.00 51.95 O
ATOM 11 C2' A A 473 94.644 -2.067 310.253 1.00 51.39 C
ATOM 12 O2' A A 473 95.900 -1.445 310.031 1.00 50.96 O
ATOM 13 C1' A A 473 94.342 -3.039 309.098 1.00 51.14 C
ATOM 14 N9 A A 473 92.895 -3.253 308.992 1.00 51.52 N
ATOM 15 C8 A A 473 92.142 -4.342 309.269 1.00 51.87 C
ATOM 16 N7 A A 473 90.849 -4.143 309.183 1.00 52.20 N
ATOM 17 C5 A A 473 90.744 -2.804 308.874 1.00 52.07 C
ATOM 18 C6 A A 473 89.656 -1.920 308.643 1.00 52.28 C
ATOM 19 N6 A A 473 88.347 -2.189 308.679 1.00 52.69 N
ATOM 20 N1 A A 473 89.979 -0.646 308.342 1.00 52.04 N
ATOM 21 C2 A A 473 91.261 -0.286 308.280 1.00 51.64 C
ATOM 22 N3 A A 473 92.342 -1.012 308.463 1.00 51.41 N
ATOM 23 C4 A A 473 92.010 -2.265 308.765 1.00 51.65 C
ATOM 24 P U A 474 94.783 -2.269 313.992 1.00 55.06 P
ATOM 25 OP1 U A 474 95.885 -1.827 314.878 1.00 55.05 O
ATOM 26 OP2 U A 474 94.031 -3.488 314.349 1.00 55.44 O
ATOM 27 O5' U A 474 93.766 -1.082 313.769 1.00 55.21 O
TER
ATOM 1 O3' G B 518 80.793 -11.909 313.307 1.00 77.32 O
ATOM 2 P A B 519 80.868 -12.064 311.707 1.00 65.65 P
ATOM 3 OP1 A B 519 79.689 -12.885 311.288 1.00 65.98 O
ATOM 4 OP2 A B 519 82.251 -12.534 311.354 1.00 65.12 O
ATOM 5 O5' A B 519 80.683 -10.581 311.209 1.00 65.42 O
ATOM 6 C5' A B 519 81.517 -10.041 310.202 1.00 64.77 C
ATOM 7 C4' A B 519 81.479 -8.549 310.255 1.00 64.69 C
ATOM 8 O4' A B 519 82.428 -8.068 311.239 1.00 64.67 O
ATOM 9 C3' A B 519 81.864 -7.825 308.991 1.00 64.10 C
ATOM 10 O3' A B 519 80.837 -7.806 308.038 1.00 64.13 O
ATOM 11 C2' A B 519 82.235 -6.450 309.506 1.00 64.05 C
ATOM 12 O2' A B 519 81.070 -5.693 309.772 1.00 64.48 O
ATOM 13 C1' A B 519 82.914 -6.801 310.842 1.00 64.29 C
ATOM 14 N9 A B 519 84.383 -6.886 310.693 1.00 63.78 N
ATOM 15 C8 A B 519 85.155 -7.980 310.885 1.00 63.67 C
ATOM 16 N7 A B 519 86.412 -7.757 310.643 1.00 63.18 N
ATOM 17 C5 A B 519 86.485 -6.446 310.250 1.00 62.95 C
ATOM 18 C6 A B 519 87.566 -5.649 309.844 1.00 62.44 C
ATOM 19 N6 A B 519 88.842 -6.045 309.774 1.00 62.05 N
ATOM 20 N1 A B 519 87.256 -4.387 309.507 1.00 62.35 N
ATOM 21 C2 A B 519 85.981 -3.976 309.581 1.00 62.75 C
ATOM 22 N3 A B 519 84.901 -4.628 309.950 1.00 63.24 N
ATOM 23 C4 A B 519 85.231 -5.882 310.275 1.00 63.31 C
ATOM 24 P A B 520 81.200 -8.094 306.511 1.00 57.86 P
ATOM 25 OP1 A B 520 79.934 -8.256 305.778 1.00 58.07 O
ATOM 26 OP2 A B 520 82.188 -9.213 306.497 1.00 57.62 O
ATOM 27 O5' A B 520 81.890 -6.752 306.071 1.00 57.41 O
TER
ATOM 2 P A A 473 95.703 -8.122 311.388 1.00 51.81 P
ATOM 3 OP1 A A 473 96.421 -8.629 312.597 1.00 52.06 O
ATOM 4 OP2 A A 473 94.248 -8.359 311.241 1.00 52.17 O
ATOM 5 O5' A A 473 96.014 -6.568 311.177 1.00 51.56 O
ATOM 6 C5' A A 473 95.048 -5.567 311.502 1.00 51.86 C
ATOM 7 C4' A A 473 95.374 -4.248 310.841 1.00 51.49 C
ATOM 8 O4' A A 473 94.930 -4.269 309.445 1.00 51.15 O
ATOM 9 C3' A A 473 94.713 -3.011 311.444 1.00 51.81 C
ATOM 10 O3' A A 473 95.445 -2.476 312.533 1.00 51.95 O
ATOM 11 C2' A A 473 94.644 -2.067 310.253 1.00 51.39 C
ATOM 12 O2' A A 473 95.900 -1.445 310.031 1.00 50.96 O
ATOM 13 C1' A A 473 94.342 -3.039 309.098 1.00 51.14 C
ATOM 14 N9 A A 473 92.895 -3.253 308.992 1.00 51.52 N
ATOM 15 C8 A A 473 92.142 -4.342 309.269 1.00 51.87 C
ATOM 16 N7 A A 473 90.849 -4.143 309.183 1.00 52.20 N
ATOM 17 C5 A A 473 90.744 -2.804 308.874 1.00 52.07 C
ATOM 18 C6 A A 473 89.656 -1.920 308.643 1.00 52.28 C
ATOM 19 N6 A A 473 88.347 -2.189 308.679 1.00 52.69 N
ATOM 20 N1 A A 473 89.979 -0.646 308.342 1.00 52.04 N
ATOM 21 C2 A A 473 91.261 -0.286 308.280 1.00 51.64 C
ATOM 22 N3 A A 473 92.342 -1.012 308.463 1.00 51.41 N
ATOM 23 C4 A A 473 92.010 -2.265 308.765 1.00 51.65 C
ATOM 24 P U A 474 94.783 -2.269 313.992 1.00 55.06 P
ATOM 25 OP1 U A 474 95.885 -1.827 314.878 1.00 55.05 O
ATOM 26 OP2 U A 474 94.031 -3.488 314.349 1.00 55.44 O
ATOM 27 O5' U A 474 93.766 -1.082 313.769 1.00 55.21 O
TER
ATOM 1 O3' G B 518 80.793 -11.909 313.307 1.00 77.32 O
ATOM 2 P A B 519 80.868 -12.064 311.707 1.00 65.65 P
ATOM 3 OP1 A B 519 79.689 -12.885 311.288 1.00 65.98 O
ATOM 4 OP2 A B 519 82.251 -12.534 311.354 1.00 65.12 O
ATOM 5 O5' A B 519 80.683 -10.581 311.209 1.00 65.42 O
ATOM 6 C5' A B 519 81.517 -10.041 310.202 1.00 64.77 C
ATOM 7 C4' A B 519 81.479 -8.549 310.255 1.00 64.69 C
ATOM 8 O4' A B 519 82.428 -8.068 311.239 1.00 64.67 O
ATOM 9 C3' A B 519 81.864 -7.825 308.991 1.00 64.10 C
ATOM 10 O3' A B 519 80.837 -7.806 308.038 1.00 64.13 O
ATOM 11 C2' A B 519 82.235 -6.450 309.506 1.00 64.05 C
ATOM 12 O2' A B 519 81.070 -5.693 309.772 1.00 64.48 O
ATOM 13 C1' A B 519 82.914 -6.801 310.842 1.00 64.29 C
ATOM 14 N9 A B 519 84.383 -6.886 310.693 1.00 63.78 N
ATOM 15 C8 A B 519 85.155 -7.980 310.885 1.00 63.67 C
ATOM 16 N7 A B 519 86.412 -7.757 310.643 1.00 63.18 N
ATOM 17 C5 A B 519 86.485 -6.446 310.250 1.00 62.95 C
ATOM 18 C6 A B 519 87.566 -5.649 309.844 1.00 62.44 C
ATOM 19 N6 A B 519 88.842 -6.045 309.774 1.00 62.05 N
ATOM 20 N1 A B 519 87.256 -4.387 309.507 1.00 62.35 N
ATOM 21 C2 A B 519 85.981 -3.976 309.581 1.00 62.75 C
ATOM 22 N3 A B 519 84.901 -4.628 309.950 1.00 63.24 N
ATOM 23 C4 A B 519 85.231 -5.882 310.275 1.00 63.31 C
ATOM 24 P A B 520 81.200 -8.094 306.511 1.00 57.86 P
ATOM 25 OP1 A B 520 79.934 -8.256 305.778 1.00 58.07 O
ATOM 26 OP2 A B 520 82.188 -9.213 306.497 1.00 57.62 O
ATOM 27 O5' A B 520 81.890 -6.752 306.071 1.00 57.41 O
TER
Atoms:
OP1: (96.421,-8.629,312.597)
OP2: (94.248,-8.359,311.241)
C3': (94.713,-3.011,311.444)
C1': (94.342,-3.039,309.098)
C5': (95.048,-5.567,311.502)
O4': (94.930,-4.269,309.445)
C8: (92.142,-4.342,309.269)
O2': (95.900,-1.445,310.031)
C6: (89.656,-1.920,308.643)
C5: (90.744,-2.804,308.874)
C4: (92.010,-2.265,308.765)
P: (95.703,-8.122,311.388)
C4': (95.374,-4.248,310.841)
C2': (94.644,-2.067,310.253)
C2: (91.261,-0.286,308.280)
N1: (89.979,-0.646,308.342)
N3: (92.342,-1.012,308.463)
N6: (88.347,-2.189,308.679)
N7: (90.849,-4.143,309.183)
N9: (92.895,-3.253,308.992)
O5': (96.014,-6.568,311.177)
O3': (95.445,-2.476,312.533)
OP2: (94.248,-8.359,311.241)
C3': (94.713,-3.011,311.444)
C1': (94.342,-3.039,309.098)
C5': (95.048,-5.567,311.502)
O4': (94.930,-4.269,309.445)
C8: (92.142,-4.342,309.269)
O2': (95.900,-1.445,310.031)
C6: (89.656,-1.920,308.643)
C5: (90.744,-2.804,308.874)
C4: (92.010,-2.265,308.765)
P: (95.703,-8.122,311.388)
C4': (95.374,-4.248,310.841)
C2': (94.644,-2.067,310.253)
C2: (91.261,-0.286,308.280)
N1: (89.979,-0.646,308.342)
N3: (92.342,-1.012,308.463)
N6: (88.347,-2.189,308.679)
N7: (90.849,-4.143,309.183)
N9: (92.895,-3.253,308.992)
O5': (96.014,-6.568,311.177)
O3': (95.445,-2.476,312.533)
OP1: (79.689,-12.885,311.288)
OP2: (82.251,-12.534,311.354)
C3': (81.864,-7.825,308.991)
C1': (82.914,-6.801,310.842)
C5': (81.517,-10.041,310.202)
O4': (82.428,-8.068,311.239)
C8: (85.155,-7.980,310.885)
O2': (81.070,-5.693,309.772)
C6: (87.566,-5.649,309.844)
C5: (86.485,-6.446,310.250)
C4: (85.231,-5.882,310.275)
P: (80.868,-12.064,311.707)
C4': (81.479,-8.549,310.255)
C2': (82.235,-6.450,309.506)
C2: (85.981,-3.976,309.581)
N1: (87.256,-4.387,309.507)
N3: (84.901,-4.628,309.950)
N6: (88.842,-6.045,309.774)
N7: (86.412,-7.757,310.643)
N9: (84.383,-6.886,310.693)
O5': (80.683,-10.581,311.209)
O3': (80.837,-7.806,308.038)
OP2: (82.251,-12.534,311.354)
C3': (81.864,-7.825,308.991)
C1': (82.914,-6.801,310.842)
C5': (81.517,-10.041,310.202)
O4': (82.428,-8.068,311.239)
C8: (85.155,-7.980,310.885)
O2': (81.070,-5.693,309.772)
C6: (87.566,-5.649,309.844)
C5: (86.485,-6.446,310.250)
C4: (85.231,-5.882,310.275)
P: (80.868,-12.064,311.707)
C4': (81.479,-8.549,310.255)
C2': (82.235,-6.450,309.506)
C2: (85.981,-3.976,309.581)
N1: (87.256,-4.387,309.507)
N3: (84.901,-4.628,309.950)
N6: (88.842,-6.045,309.774)
N7: (86.412,-7.757,310.643)
N9: (84.383,-6.886,310.693)
O5': (80.683,-10.581,311.209)
O3': (80.837,-7.806,308.038)
Image (generated by PyMOL):