ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:0448:0443

Extra

PDB:
ATOM 1 O3' A A 447 45.143 138.163 53.295 1.00 34.92 O
ATOM 2 P A A 448 43.669 137.528 53.183 1.00 33.62 P
ATOM 3 OP1 A A 448 43.030 137.675 54.509 1.00 33.06 O
ATOM 4 OP2 A A 448 43.741 136.193 52.538 1.00 32.00 O
ATOM 5 O5' A A 448 42.909 138.519 52.198 1.00 35.86 O
ATOM 6 C5' A A 448 43.306 138.636 50.817 1.00 34.58 C
ATOM 7 C4' A A 448 42.131 139.070 49.973 1.00 38.51 C
ATOM 8 O4' A A 448 41.159 137.992 49.873 1.00 37.81 O
ATOM 9 C3' A A 448 41.356 140.290 50.460 1.00 38.61 C
ATOM 10 O3' A A 448 40.919 140.990 49.303 1.00 46.01 O
ATOM 11 C2' A A 448 40.176 139.661 51.197 1.00 38.70 C
ATOM 12 O2' A A 448 39.034 140.485 51.233 1.00 40.09 O
ATOM 13 C1' A A 448 39.895 138.432 50.334 1.00 37.55 C
ATOM 14 N9 A A 448 39.267 137.298 51.018 1.00 40.02 N
ATOM 15 C8 A A 448 39.688 136.694 52.177 1.00 41.00 C
ATOM 16 N7 A A 448 39.012 135.616 52.489 1.00 39.97 N
ATOM 17 C5 A A 448 38.061 135.515 51.486 1.00 40.95 C
ATOM 18 C6 A A 448 37.048 134.566 51.235 1.00 39.47 C
ATOM 19 N6 A A 448 36.856 133.481 51.980 1.00 39.82 N
ATOM 20 N1 A A 448 36.245 134.769 50.170 1.00 38.59 N
ATOM 21 C2 A A 448 36.466 135.843 49.400 1.00 40.01 C
ATOM 22 N3 A A 448 37.399 136.790 49.515 1.00 41.11 N
ATOM 23 C4 A A 448 38.178 136.566 50.592 1.00 41.30 C
ATOM 24 P C A 449 41.869 142.112 48.644 1.00 46.28 P
ATOM 25 OP1 C A 449 41.207 142.574 47.395 1.00 47.61 O
ATOM 26 OP2 C A 449 43.264 141.598 48.592 1.00 44.67 O
ATOM 27 O5' C A 449 41.759 143.295 49.691 1.00 46.23 O
TER

ATOM 1 O3' U B 442 42.346 130.667 62.242 1.00 35.82 O
ATOM 2 P A B 443 43.121 129.999 61.009 1.00 37.47 P
ATOM 3 OP1 A B 443 43.982 128.897 61.487 1.00 34.25 O
ATOM 4 OP2 A B 443 43.730 131.100 60.215 1.00 37.02 O
ATOM 5 O5' A B 443 41.954 129.374 60.130 1.00 39.95 O
ATOM 6 C5' A B 443 41.181 128.246 60.586 1.00 36.79 C
ATOM 7 C4' A B 443 40.268 127.783 59.477 1.00 35.92 C
ATOM 8 O4' A B 443 39.309 128.835 59.175 1.00 38.46 O
ATOM 9 C3' A B 443 40.961 127.534 58.147 1.00 35.30 C
ATOM 10 O3' A B 443 41.544 126.241 58.096 1.00 32.88 O
ATOM 11 C2' A B 443 39.823 127.698 57.157 1.00 35.89 C
ATOM 12 O2' A B 443 38.969 126.571 57.140 1.00 37.94 O
ATOM 13 C1' A B 443 39.049 128.857 57.781 1.00 37.99 C
ATOM 14 N9 A B 443 39.417 130.176 57.264 1.00 41.03 N
ATOM 15 C8 A B 443 40.104 131.165 57.925 1.00 39.41 C
ATOM 16 N7 A B 443 40.256 132.258 57.228 1.00 39.48 N
ATOM 17 C5 A B 443 39.639 131.974 56.023 1.00 40.19 C
ATOM 18 C6 A B 443 39.453 132.734 54.865 1.00 40.25 C
ATOM 19 N6 A B 443 39.894 133.982 54.728 1.00 36.02 N
ATOM 20 N1 A B 443 38.787 132.161 53.838 1.00 42.91 N
ATOM 21 C2 A B 443 38.349 130.905 53.983 1.00 40.83 C
ATOM 22 N3 A B 443 38.464 130.090 55.025 1.00 39.30 N
ATOM 23 C4 A B 443 39.124 130.692 56.025 1.00 39.51 C
ATOM 24 P G B 444 42.950 126.036 57.363 1.00 34.99 P
ATOM 25 OP1 G B 444 43.222 124.590 57.264 1.00 38.04 O
ATOM 26 OP2 G B 444 43.952 126.917 58.016 1.00 40.77 O
ATOM 27 O5' G B 444 42.689 126.592 55.890 1.00 38.11 O
TER

Atoms:
OP1: (43.030,137.675,54.509)
OP2: (43.741,136.193,52.538)
C3': (41.356,140.290,50.460)
C1': (39.895,138.432,50.334)
C5': (43.306,138.636,50.817)
O4': (41.159,137.992,49.873)
C8: (39.688,136.694,52.177)
O2': (39.034,140.485,51.233)
C6: (37.048,134.566,51.235)
C5: (38.061,135.515,51.486)
C4: (38.178,136.566,50.592)
P: (43.669,137.528,53.183)
C4': (42.131,139.070,49.973)
C2': (40.176,139.661,51.197)
C2: (36.466,135.843,49.400)
N1: (36.245,134.769,50.170)
N3: (37.399,136.790,49.515)
N6: (36.856,133.481,51.980)
N7: (39.012,135.616,52.489)
N9: (39.267,137.298,51.018)
O5': (42.909,138.519,52.198)
O3': (40.919,140.990,49.303)
OP1: (43.982,128.897,61.487)
OP2: (43.730,131.100,60.215)
C3': (40.961,127.534,58.147)
C1': (39.049,128.857,57.781)
C5': (41.181,128.246,60.586)
O4': (39.309,128.835,59.175)
C8: (40.104,131.165,57.925)
O2': (38.969,126.571,57.140)
C6: (39.453,132.734,54.865)
C5: (39.639,131.974,56.023)
C4: (39.124,130.692,56.025)
P: (43.121,129.999,61.009)
C4': (40.268,127.783,59.477)
C2': (39.823,127.698,57.157)
C2: (38.349,130.905,53.983)
N1: (38.787,132.161,53.838)
N3: (38.464,130.090,55.025)
N6: (39.894,133.982,54.728)
N7: (40.256,132.258,57.228)
N9: (39.417,130.176,57.264)
O5': (41.954,129.374,60.130)
O3': (41.544,126.241,58.096)
Image (generated by PyMOL):
PyMOL image
show in jmol