Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y27:X21:X50
Extra
PDB:
ATOM 1 O3' U A 20 14.373 -8.607 51.321 1.00 45.46 O
ATOM 2 P A A 21 15.631 -8.890 52.266 1.00 45.45 P
ATOM 3 OP1 A A 21 15.746 -10.352 52.462 1.00 45.81 O
ATOM 4 OP2 A A 21 15.559 -7.994 53.440 1.00 45.34 O
ATOM 5 O5' A A 21 16.838 -8.417 51.335 1.00 45.56 O
ATOM 6 C5' A A 21 17.072 -9.029 50.067 1.00 45.14 C
ATOM 7 C4' A A 21 18.122 -8.244 49.304 1.00 45.07 C
ATOM 8 O4' A A 21 17.564 -6.958 48.952 1.00 44.59 O
ATOM 9 C3' A A 21 19.416 -7.958 50.067 1.00 45.35 C
ATOM 10 O3' A A 21 20.554 -8.225 49.234 1.00 46.24 O
ATOM 11 C2' A A 21 19.296 -6.484 50.462 1.00 44.99 C
ATOM 12 O2' A A 21 20.549 -5.830 50.532 1.00 44.79 O
ATOM 13 C1' A A 21 18.435 -5.917 49.332 1.00 44.46 C
ATOM 14 N9 A A 21 17.607 -4.777 49.722 1.00 44.24 N
ATOM 15 C8 A A 21 16.291 -4.812 50.099 1.00 44.17 C
ATOM 16 N7 A A 21 15.790 -3.638 50.399 1.00 44.16 N
ATOM 17 C5 A A 21 16.850 -2.769 50.207 1.00 44.18 C
ATOM 18 C6 A A 21 16.974 -1.369 50.357 1.00 44.18 C
ATOM 19 N6 A A 21 15.967 -0.583 50.752 1.00 44.16 N
ATOM 20 N1 A A 21 18.174 -0.805 50.084 1.00 44.23 N
ATOM 21 C2 A A 21 19.184 -1.594 49.682 1.00 44.22 C
ATOM 22 N3 A A 21 19.187 -2.919 49.509 1.00 44.21 N
ATOM 23 C4 A A 21 17.981 -3.453 49.788 1.00 44.20 C
ATOM 24 P U A 22 21.255 -9.669 49.237 1.00 46.66 P
ATOM 25 OP1 U A 22 21.214 -10.188 50.624 1.00 46.30 O
ATOM 26 OP2 U A 22 22.562 -9.548 48.549 1.00 46.53 O
ATOM 27 O5' U A 22 20.236 -10.532 48.336 1.00 46.88 O
TER
ATOM 1 O3' U B 49 9.774 -2.046 57.447 1.00 51.03 O
ATOM 2 P A B 50 8.385 -2.490 56.769 1.00 51.13 P
ATOM 3 OP1 A B 50 7.454 -2.798 57.877 1.00 51.09 O
ATOM 4 OP2 A B 50 8.649 -3.521 55.738 1.00 50.90 O
ATOM 5 O5' A B 50 7.864 -1.147 56.073 1.00 50.96 O
ATOM 6 C5' A B 50 6.630 -1.143 55.366 1.00 50.47 C
ATOM 7 C4' A B 50 6.664 -0.208 54.169 1.00 50.06 C
ATOM 8 O4' A B 50 8.027 0.005 53.717 1.00 49.55 O
ATOM 9 C3' A B 50 5.899 -0.729 52.961 1.00 50.02 C
ATOM 10 O3' A B 50 4.558 -0.255 53.006 1.00 50.65 O
ATOM 11 C2' A B 50 6.680 -0.174 51.770 1.00 49.64 C
ATOM 12 O2' A B 50 6.242 1.115 51.382 1.00 49.37 O
ATOM 13 C1' A B 50 8.110 -0.103 52.307 1.00 49.02 C
ATOM 14 N9 A B 50 8.979 -1.246 52.004 1.00 48.58 N
ATOM 15 C8 A B 50 8.667 -2.579 52.041 1.00 48.45 C
ATOM 16 N7 A B 50 9.664 -3.373 51.733 1.00 48.36 N
ATOM 17 C5 A B 50 10.711 -2.504 51.481 1.00 48.41 C
ATOM 18 C6 A B 50 12.058 -2.711 51.105 1.00 48.62 C
ATOM 19 N6 A B 50 12.590 -3.922 50.904 1.00 48.56 N
ATOM 20 N1 A B 50 12.841 -1.622 50.933 1.00 48.63 N
ATOM 21 C2 A B 50 12.311 -0.406 51.132 1.00 48.54 C
ATOM 22 N3 A B 50 11.064 -0.088 51.485 1.00 48.44 N
ATOM 23 C4 A B 50 10.306 -1.189 51.647 1.00 48.35 C
ATOM 24 P A B 51 3.355 -1.153 52.446 1.00 51.22 P
ATOM 25 OP1 A B 51 2.088 -0.549 52.920 1.00 51.12 O
ATOM 26 OP2 A B 51 3.646 -2.572 52.756 1.00 51.06 O
ATOM 27 O5' A B 51 3.462 -0.942 50.863 1.00 51.20 O
TER
ATOM 2 P A A 21 15.631 -8.890 52.266 1.00 45.45 P
ATOM 3 OP1 A A 21 15.746 -10.352 52.462 1.00 45.81 O
ATOM 4 OP2 A A 21 15.559 -7.994 53.440 1.00 45.34 O
ATOM 5 O5' A A 21 16.838 -8.417 51.335 1.00 45.56 O
ATOM 6 C5' A A 21 17.072 -9.029 50.067 1.00 45.14 C
ATOM 7 C4' A A 21 18.122 -8.244 49.304 1.00 45.07 C
ATOM 8 O4' A A 21 17.564 -6.958 48.952 1.00 44.59 O
ATOM 9 C3' A A 21 19.416 -7.958 50.067 1.00 45.35 C
ATOM 10 O3' A A 21 20.554 -8.225 49.234 1.00 46.24 O
ATOM 11 C2' A A 21 19.296 -6.484 50.462 1.00 44.99 C
ATOM 12 O2' A A 21 20.549 -5.830 50.532 1.00 44.79 O
ATOM 13 C1' A A 21 18.435 -5.917 49.332 1.00 44.46 C
ATOM 14 N9 A A 21 17.607 -4.777 49.722 1.00 44.24 N
ATOM 15 C8 A A 21 16.291 -4.812 50.099 1.00 44.17 C
ATOM 16 N7 A A 21 15.790 -3.638 50.399 1.00 44.16 N
ATOM 17 C5 A A 21 16.850 -2.769 50.207 1.00 44.18 C
ATOM 18 C6 A A 21 16.974 -1.369 50.357 1.00 44.18 C
ATOM 19 N6 A A 21 15.967 -0.583 50.752 1.00 44.16 N
ATOM 20 N1 A A 21 18.174 -0.805 50.084 1.00 44.23 N
ATOM 21 C2 A A 21 19.184 -1.594 49.682 1.00 44.22 C
ATOM 22 N3 A A 21 19.187 -2.919 49.509 1.00 44.21 N
ATOM 23 C4 A A 21 17.981 -3.453 49.788 1.00 44.20 C
ATOM 24 P U A 22 21.255 -9.669 49.237 1.00 46.66 P
ATOM 25 OP1 U A 22 21.214 -10.188 50.624 1.00 46.30 O
ATOM 26 OP2 U A 22 22.562 -9.548 48.549 1.00 46.53 O
ATOM 27 O5' U A 22 20.236 -10.532 48.336 1.00 46.88 O
TER
ATOM 1 O3' U B 49 9.774 -2.046 57.447 1.00 51.03 O
ATOM 2 P A B 50 8.385 -2.490 56.769 1.00 51.13 P
ATOM 3 OP1 A B 50 7.454 -2.798 57.877 1.00 51.09 O
ATOM 4 OP2 A B 50 8.649 -3.521 55.738 1.00 50.90 O
ATOM 5 O5' A B 50 7.864 -1.147 56.073 1.00 50.96 O
ATOM 6 C5' A B 50 6.630 -1.143 55.366 1.00 50.47 C
ATOM 7 C4' A B 50 6.664 -0.208 54.169 1.00 50.06 C
ATOM 8 O4' A B 50 8.027 0.005 53.717 1.00 49.55 O
ATOM 9 C3' A B 50 5.899 -0.729 52.961 1.00 50.02 C
ATOM 10 O3' A B 50 4.558 -0.255 53.006 1.00 50.65 O
ATOM 11 C2' A B 50 6.680 -0.174 51.770 1.00 49.64 C
ATOM 12 O2' A B 50 6.242 1.115 51.382 1.00 49.37 O
ATOM 13 C1' A B 50 8.110 -0.103 52.307 1.00 49.02 C
ATOM 14 N9 A B 50 8.979 -1.246 52.004 1.00 48.58 N
ATOM 15 C8 A B 50 8.667 -2.579 52.041 1.00 48.45 C
ATOM 16 N7 A B 50 9.664 -3.373 51.733 1.00 48.36 N
ATOM 17 C5 A B 50 10.711 -2.504 51.481 1.00 48.41 C
ATOM 18 C6 A B 50 12.058 -2.711 51.105 1.00 48.62 C
ATOM 19 N6 A B 50 12.590 -3.922 50.904 1.00 48.56 N
ATOM 20 N1 A B 50 12.841 -1.622 50.933 1.00 48.63 N
ATOM 21 C2 A B 50 12.311 -0.406 51.132 1.00 48.54 C
ATOM 22 N3 A B 50 11.064 -0.088 51.485 1.00 48.44 N
ATOM 23 C4 A B 50 10.306 -1.189 51.647 1.00 48.35 C
ATOM 24 P A B 51 3.355 -1.153 52.446 1.00 51.22 P
ATOM 25 OP1 A B 51 2.088 -0.549 52.920 1.00 51.12 O
ATOM 26 OP2 A B 51 3.646 -2.572 52.756 1.00 51.06 O
ATOM 27 O5' A B 51 3.462 -0.942 50.863 1.00 51.20 O
TER
Atoms:
OP1: (15.746,-10.352,52.462)
OP2: (15.559,-7.994,53.440)
C3': (19.416,-7.958,50.067)
C1': (18.435,-5.917,49.332)
C5': (17.072,-9.029,50.067)
O4': (17.564,-6.958,48.952)
C8: (16.291,-4.812,50.099)
O2': (20.549,-5.830,50.532)
C6: (16.974,-1.369,50.357)
C5: (16.850,-2.769,50.207)
C4: (17.981,-3.453,49.788)
P: (15.631,-8.890,52.266)
C4': (18.122,-8.244,49.304)
C2': (19.296,-6.484,50.462)
C2: (19.184,-1.594,49.682)
N1: (18.174,-0.805,50.084)
N3: (19.187,-2.919,49.509)
N6: (15.967,-0.583,50.752)
N7: (15.790,-3.638,50.399)
N9: (17.607,-4.777,49.722)
O5': (16.838,-8.417,51.335)
O3': (20.554,-8.225,49.234)
OP2: (15.559,-7.994,53.440)
C3': (19.416,-7.958,50.067)
C1': (18.435,-5.917,49.332)
C5': (17.072,-9.029,50.067)
O4': (17.564,-6.958,48.952)
C8: (16.291,-4.812,50.099)
O2': (20.549,-5.830,50.532)
C6: (16.974,-1.369,50.357)
C5: (16.850,-2.769,50.207)
C4: (17.981,-3.453,49.788)
P: (15.631,-8.890,52.266)
C4': (18.122,-8.244,49.304)
C2': (19.296,-6.484,50.462)
C2: (19.184,-1.594,49.682)
N1: (18.174,-0.805,50.084)
N3: (19.187,-2.919,49.509)
N6: (15.967,-0.583,50.752)
N7: (15.790,-3.638,50.399)
N9: (17.607,-4.777,49.722)
O5': (16.838,-8.417,51.335)
O3': (20.554,-8.225,49.234)
OP1: (7.454,-2.798,57.877)
OP2: (8.649,-3.521,55.738)
C3': (5.899,-0.729,52.961)
C1': (8.110,-0.103,52.307)
C5': (6.630,-1.143,55.366)
O4': (8.027,0.005,53.717)
C8: (8.667,-2.579,52.041)
O2': (6.242,1.115,51.382)
C6: (12.058,-2.711,51.105)
C5: (10.711,-2.504,51.481)
C4: (10.306,-1.189,51.647)
P: (8.385,-2.490,56.769)
C4': (6.664,-0.208,54.169)
C2': (6.680,-0.174,51.770)
C2: (12.311,-0.406,51.132)
N1: (12.841,-1.622,50.933)
N3: (11.064,-0.088,51.485)
N6: (12.590,-3.922,50.904)
N7: (9.664,-3.373,51.733)
N9: (8.979,-1.246,52.004)
O5': (7.864,-1.147,56.073)
O3': (4.558,-0.255,53.006)
OP2: (8.649,-3.521,55.738)
C3': (5.899,-0.729,52.961)
C1': (8.110,-0.103,52.307)
C5': (6.630,-1.143,55.366)
O4': (8.027,0.005,53.717)
C8: (8.667,-2.579,52.041)
O2': (6.242,1.115,51.382)
C6: (12.058,-2.711,51.105)
C5: (10.711,-2.504,51.481)
C4: (10.306,-1.189,51.647)
P: (8.385,-2.490,56.769)
C4': (6.664,-0.208,54.169)
C2': (6.680,-0.174,51.770)
C2: (12.311,-0.406,51.132)
N1: (12.841,-1.622,50.933)
N3: (11.064,-0.088,51.485)
N6: (12.590,-3.922,50.904)
N7: (9.664,-3.373,51.733)
N9: (8.979,-1.246,52.004)
O5': (7.864,-1.147,56.073)
O3': (4.558,-0.255,53.006)
Image (generated by PyMOL):