ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A2117:A2063

Extra

PDB:
ATOM 1 O3' G A2116 98.626 108.604 67.947 1.00 61.33 O
ATOM 2 P G A2117 97.852 107.892 69.154 1.00 63.83 P
ATOM 3 OP1 G A2117 98.807 108.004 70.317 1.00 62.93 O
ATOM 4 OP2 G A2117 97.426 106.542 68.676 1.00 63.20 O
ATOM 5 O5' G A2117 96.558 108.807 69.375 1.00 59.02 O
ATOM 6 C5' G A2117 96.461 109.644 70.540 1.00 52.59 C
ATOM 7 C4' G A2117 95.767 110.950 70.218 1.00 46.31 C
ATOM 8 O4' G A2117 94.450 110.643 69.708 1.00 44.48 O
ATOM 9 C3' G A2117 95.550 111.841 71.443 1.00 44.03 C
ATOM 10 O3' G A2117 95.463 113.220 71.092 1.00 41.00 O
ATOM 11 C2' G A2117 94.213 111.326 71.956 1.00 42.52 C
ATOM 12 O2' G A2117 93.472 112.233 72.715 1.00 42.15 O
ATOM 13 C1' G A2117 93.480 111.026 70.658 1.00 42.90 C
ATOM 14 N9 G A2117 92.536 109.928 70.809 1.00 43.18 N
ATOM 15 C8 G A2117 91.287 109.858 70.252 1.00 44.32 C
ATOM 16 N7 G A2117 90.642 108.774 70.572 1.00 43.93 N
ATOM 17 C5 G A2117 91.514 108.085 71.393 1.00 43.15 C
ATOM 18 C6 G A2117 91.348 106.862 72.049 1.00 43.49 C
ATOM 19 O6 G A2117 90.354 106.138 72.064 1.00 44.63 O
ATOM 20 N1 G A2117 92.489 106.495 72.756 1.00 43.71 N
ATOM 21 C2 G A2117 93.643 107.224 72.825 1.00 42.95 C
ATOM 22 N2 G A2117 94.646 106.660 73.538 1.00 41.41 N
ATOM 23 N3 G A2117 93.802 108.406 72.232 1.00 43.28 N
ATOM 24 C4 G A2117 92.700 108.770 71.536 1.00 42.68 C
ATOM 25 P G A2118 96.785 114.133 71.009 1.00 36.60 P
ATOM 26 OP1 G A2118 97.886 113.233 70.669 1.00 37.20 O
ATOM 27 OP2 G A2118 96.879 114.996 72.211 1.00 35.49 O
ATOM 28 O5' G A2118 96.481 115.021 69.726 1.00 35.88 O
TER

ATOM 1 O3' U B2062 96.905 107.219 76.866 1.00 39.57 O
ATOM 2 P U B2063 97.475 106.468 75.575 1.00 39.76 P
ATOM 3 OP1 U B2063 98.897 106.199 75.774 1.00 41.51 O
ATOM 4 OP2 U B2063 97.035 107.250 74.410 1.00 39.35 O
ATOM 5 O5' U B2063 96.729 105.061 75.515 1.00 41.57 O
ATOM 6 C5' U B2063 96.841 104.225 74.329 1.00 43.23 C
ATOM 7 C4' U B2063 96.930 102.771 74.715 1.00 44.87 C
ATOM 8 O4' U B2063 98.171 102.493 75.410 1.00 45.81 O
ATOM 9 C3' U B2063 95.863 102.352 75.696 1.00 45.54 C
ATOM 10 O3' U B2063 94.622 102.135 75.056 1.00 43.46 O
ATOM 11 C2' U B2063 96.474 101.141 76.391 1.00 46.18 C
ATOM 12 O2' U B2063 96.317 99.915 75.699 1.00 47.23 O
ATOM 13 C1' U B2063 97.950 101.527 76.432 1.00 47.14 C
ATOM 14 N1 U B2063 98.338 102.111 77.725 1.00 49.15 N
ATOM 15 C2 U B2063 98.346 101.298 78.859 1.00 50.63 C
ATOM 16 O2 U B2063 98.099 100.100 78.839 1.00 53.28 O
ATOM 17 N3 U B2063 98.674 101.947 80.025 1.00 51.40 N
ATOM 18 C4 U B2063 99.007 103.280 80.171 1.00 51.31 C
ATOM 19 O4 U B2063 99.248 103.729 81.295 1.00 51.32 O
ATOM 20 C5 U B2063 99.008 104.029 78.958 1.00 51.21 C
ATOM 21 C6 U B2063 98.679 103.437 77.811 1.00 50.49 C
ATOM 22 P A B2064 93.401 103.117 75.386 1.00 41.42 P
ATOM 23 OP1 A B2064 93.342 104.193 74.356 1.00 41.95 O
ATOM 24 OP2 A B2064 93.531 103.482 76.817 1.00 40.10 O
ATOM 25 O5' A B2064 92.135 102.179 75.218 1.00 41.23 O
TER

Atoms:
OP1: (98.807,108.004,70.317)
OP2: (97.426,106.542,68.676)
C3': (95.550,111.841,71.443)
C1': (93.480,111.026,70.658)
C5': (96.461,109.644,70.540)
O6: (90.354,106.138,72.064)
O4': (94.450,110.643,69.708)
C8: (91.287,109.858,70.252)
C2: (93.643,107.224,72.825)
C6: (91.348,106.862,72.049)
C5: (91.514,108.085,71.393)
C4: (92.700,108.770,71.536)
P: (97.852,107.892,69.154)
C4': (95.767,110.950,70.218)
C2': (94.213,111.326,71.956)
O2': (93.472,112.233,72.715)
N1: (92.489,106.495,72.756)
N2: (94.646,106.660,73.538)
N3: (93.802,108.406,72.232)
N7: (90.642,108.774,70.572)
N9: (92.536,109.928,70.809)
O5': (96.558,108.807,69.375)
O3': (95.463,113.220,71.092)
C4: (99.007,103.280,80.171)
N3: (98.674,101.947,80.025)
OP1: (98.897,106.199,75.774)
OP2: (97.035,107.250,74.410)
C2: (98.346,101.298,78.859)
C1': (97.950,101.527,76.432)
C3': (95.863,102.352,75.696)
O5': (96.729,105.061,75.515)
O4': (98.171,102.493,75.410)
C5': (96.841,104.225,74.329)
P: (97.475,106.468,75.575)
C4': (96.930,102.771,74.715)
C2': (96.474,101.141,76.391)
O2': (96.317,99.915,75.699)
N1: (98.338,102.111,77.725)
O4: (99.248,103.729,81.295)
O2: (98.099,100.100,78.839)
C6: (98.679,103.437,77.811)
C5: (99.008,104.029,78.958)
O3': (94.622,102.135,75.056)
Image (generated by PyMOL):
PyMOL image
show in jmol