Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1826:A1833
Extra
PDB:
ATOM 1 O3' G A1825 113.159 -2.655 4.954 1.00 34.52 O
ATOM 2 P U A1826 112.475 -2.591 6.401 1.00 42.50 P
ATOM 3 OP1 U A1826 113.529 -2.434 7.435 1.00 33.18 O
ATOM 4 OP2 U A1826 111.545 -3.734 6.479 1.00 49.75 O
ATOM 5 O5' U A1826 111.620 -1.246 6.357 1.00 58.39 O
ATOM 6 C5' U A1826 112.249 0.017 6.116 1.00 58.43 C
ATOM 7 C4' U A1826 111.253 1.136 6.262 1.00 54.88 C
ATOM 8 O4' U A1826 110.260 1.007 5.221 1.00 57.48 O
ATOM 9 C3' U A1826 110.486 1.124 7.576 1.00 62.44 C
ATOM 10 O3' U A1826 111.189 1.873 8.572 1.00 65.77 O
ATOM 11 C2' U A1826 109.146 1.754 7.204 1.00 65.14 C
ATOM 12 O2' U A1826 109.127 3.165 7.269 1.00 71.23 O
ATOM 13 C1' U A1826 108.987 1.325 5.741 1.00 62.86 C
ATOM 14 N1 U A1826 108.081 0.188 5.517 1.00 67.27 N
ATOM 15 C2 U A1826 106.727 0.409 5.680 1.00 65.85 C
ATOM 16 O2 U A1826 106.271 1.476 6.057 1.00 63.38 O
ATOM 17 N3 U A1826 105.922 -0.664 5.391 1.00 67.71 N
ATOM 18 C4 U A1826 106.317 -1.921 4.972 1.00 70.60 C
ATOM 19 O4 U A1826 105.455 -2.752 4.637 1.00 69.30 O
ATOM 20 C5 U A1826 107.738 -2.087 4.865 1.00 64.83 C
ATOM 21 C6 U A1826 108.551 -1.054 5.134 1.00 65.68 C
ATOM 22 P A A1827 111.346 1.294 10.078 1.00 72.04 P
ATOM 23 OP1 A A1827 112.753 1.529 10.495 1.00 76.69 O
ATOM 24 OP2 A A1827 110.775 -0.080 10.178 1.00 70.13 O
ATOM 25 O5' A A1827 110.419 2.250 10.959 1.00 69.93 O
TER
ATOM 1 O3' U B1832 101.591 -6.630 8.427 1.00 53.64 O
ATOM 2 P A B1833 102.208 -6.454 6.955 1.00 58.09 P
ATOM 3 OP1 A B1833 101.313 -7.138 5.991 1.00 37.14 O
ATOM 4 OP2 A B1833 103.643 -6.856 7.027 1.00 61.88 O
ATOM 5 O5' A B1833 102.074 -4.883 6.686 1.00 63.45 O
ATOM 6 C5' A B1833 100.794 -4.245 6.790 1.00 57.41 C
ATOM 7 C4' A B1833 100.928 -2.734 6.947 1.00 55.47 C
ATOM 8 O4' A B1833 101.908 -2.442 7.978 1.00 58.64 O
ATOM 9 C3' A B1833 101.334 -1.909 5.719 1.00 58.05 C
ATOM 10 O3' A B1833 100.462 -0.786 5.522 1.00 62.17 O
ATOM 11 C2' A B1833 102.789 -1.562 6.001 1.00 59.56 C
ATOM 12 O2' A B1833 103.281 -0.421 5.348 1.00 59.80 O
ATOM 13 C1' A B1833 102.815 -1.461 7.519 1.00 65.85 C
ATOM 14 N9 A B1833 104.150 -1.765 8.028 1.00 68.95 N
ATOM 15 C8 A B1833 104.790 -2.975 8.168 1.00 64.55 C
ATOM 16 N7 A B1833 106.040 -2.863 8.552 1.00 70.90 N
ATOM 17 C5 A B1833 106.220 -1.489 8.693 1.00 68.74 C
ATOM 18 C6 A B1833 107.336 -0.713 9.058 1.00 69.05 C
ATOM 19 N6 A B1833 108.532 -1.220 9.331 1.00 74.93 N
ATOM 20 N1 A B1833 107.176 0.628 9.124 1.00 66.74 N
ATOM 21 C2 A B1833 105.989 1.145 8.829 1.00 68.08 C
ATOM 22 N3 A B1833 104.873 0.526 8.453 1.00 70.11 N
ATOM 23 C4 A B1833 105.059 -0.808 8.405 1.00 69.24 C
ATOM 24 P A B1834 99.200 -0.960 4.526 1.00 59.53 P
ATOM 25 OP1 A B1834 98.272 -1.990 5.077 1.00 55.11 O
ATOM 26 OP2 A B1834 99.766 -1.104 3.163 1.00 48.63 O
ATOM 27 O5' A B1834 98.409 0.413 4.569 1.00 59.03 O
TER
ATOM 2 P U A1826 112.475 -2.591 6.401 1.00 42.50 P
ATOM 3 OP1 U A1826 113.529 -2.434 7.435 1.00 33.18 O
ATOM 4 OP2 U A1826 111.545 -3.734 6.479 1.00 49.75 O
ATOM 5 O5' U A1826 111.620 -1.246 6.357 1.00 58.39 O
ATOM 6 C5' U A1826 112.249 0.017 6.116 1.00 58.43 C
ATOM 7 C4' U A1826 111.253 1.136 6.262 1.00 54.88 C
ATOM 8 O4' U A1826 110.260 1.007 5.221 1.00 57.48 O
ATOM 9 C3' U A1826 110.486 1.124 7.576 1.00 62.44 C
ATOM 10 O3' U A1826 111.189 1.873 8.572 1.00 65.77 O
ATOM 11 C2' U A1826 109.146 1.754 7.204 1.00 65.14 C
ATOM 12 O2' U A1826 109.127 3.165 7.269 1.00 71.23 O
ATOM 13 C1' U A1826 108.987 1.325 5.741 1.00 62.86 C
ATOM 14 N1 U A1826 108.081 0.188 5.517 1.00 67.27 N
ATOM 15 C2 U A1826 106.727 0.409 5.680 1.00 65.85 C
ATOM 16 O2 U A1826 106.271 1.476 6.057 1.00 63.38 O
ATOM 17 N3 U A1826 105.922 -0.664 5.391 1.00 67.71 N
ATOM 18 C4 U A1826 106.317 -1.921 4.972 1.00 70.60 C
ATOM 19 O4 U A1826 105.455 -2.752 4.637 1.00 69.30 O
ATOM 20 C5 U A1826 107.738 -2.087 4.865 1.00 64.83 C
ATOM 21 C6 U A1826 108.551 -1.054 5.134 1.00 65.68 C
ATOM 22 P A A1827 111.346 1.294 10.078 1.00 72.04 P
ATOM 23 OP1 A A1827 112.753 1.529 10.495 1.00 76.69 O
ATOM 24 OP2 A A1827 110.775 -0.080 10.178 1.00 70.13 O
ATOM 25 O5' A A1827 110.419 2.250 10.959 1.00 69.93 O
TER
ATOM 1 O3' U B1832 101.591 -6.630 8.427 1.00 53.64 O
ATOM 2 P A B1833 102.208 -6.454 6.955 1.00 58.09 P
ATOM 3 OP1 A B1833 101.313 -7.138 5.991 1.00 37.14 O
ATOM 4 OP2 A B1833 103.643 -6.856 7.027 1.00 61.88 O
ATOM 5 O5' A B1833 102.074 -4.883 6.686 1.00 63.45 O
ATOM 6 C5' A B1833 100.794 -4.245 6.790 1.00 57.41 C
ATOM 7 C4' A B1833 100.928 -2.734 6.947 1.00 55.47 C
ATOM 8 O4' A B1833 101.908 -2.442 7.978 1.00 58.64 O
ATOM 9 C3' A B1833 101.334 -1.909 5.719 1.00 58.05 C
ATOM 10 O3' A B1833 100.462 -0.786 5.522 1.00 62.17 O
ATOM 11 C2' A B1833 102.789 -1.562 6.001 1.00 59.56 C
ATOM 12 O2' A B1833 103.281 -0.421 5.348 1.00 59.80 O
ATOM 13 C1' A B1833 102.815 -1.461 7.519 1.00 65.85 C
ATOM 14 N9 A B1833 104.150 -1.765 8.028 1.00 68.95 N
ATOM 15 C8 A B1833 104.790 -2.975 8.168 1.00 64.55 C
ATOM 16 N7 A B1833 106.040 -2.863 8.552 1.00 70.90 N
ATOM 17 C5 A B1833 106.220 -1.489 8.693 1.00 68.74 C
ATOM 18 C6 A B1833 107.336 -0.713 9.058 1.00 69.05 C
ATOM 19 N6 A B1833 108.532 -1.220 9.331 1.00 74.93 N
ATOM 20 N1 A B1833 107.176 0.628 9.124 1.00 66.74 N
ATOM 21 C2 A B1833 105.989 1.145 8.829 1.00 68.08 C
ATOM 22 N3 A B1833 104.873 0.526 8.453 1.00 70.11 N
ATOM 23 C4 A B1833 105.059 -0.808 8.405 1.00 69.24 C
ATOM 24 P A B1834 99.200 -0.960 4.526 1.00 59.53 P
ATOM 25 OP1 A B1834 98.272 -1.990 5.077 1.00 55.11 O
ATOM 26 OP2 A B1834 99.766 -1.104 3.163 1.00 48.63 O
ATOM 27 O5' A B1834 98.409 0.413 4.569 1.00 59.03 O
TER
Atoms:
C4: (106.317,-1.921,4.972)
N3: (105.922,-0.664,5.391)
OP1: (113.529,-2.434,7.435)
OP2: (111.545,-3.734,6.479)
C2: (106.727,0.409,5.680)
C1': (108.987,1.325,5.741)
C3': (110.486,1.124,7.576)
O5': (111.620,-1.246,6.357)
O4': (110.260,1.007,5.221)
C5': (112.249,0.017,6.116)
P: (112.475,-2.591,6.401)
C4': (111.253,1.136,6.262)
C2': (109.146,1.754,7.204)
O2': (109.127,3.165,7.269)
N1: (108.081,0.188,5.517)
O4: (105.455,-2.752,4.637)
O2: (106.271,1.476,6.057)
C6: (108.551,-1.054,5.134)
C5: (107.738,-2.087,4.865)
O3': (111.189,1.873,8.572)
N3: (105.922,-0.664,5.391)
OP1: (113.529,-2.434,7.435)
OP2: (111.545,-3.734,6.479)
C2: (106.727,0.409,5.680)
C1': (108.987,1.325,5.741)
C3': (110.486,1.124,7.576)
O5': (111.620,-1.246,6.357)
O4': (110.260,1.007,5.221)
C5': (112.249,0.017,6.116)
P: (112.475,-2.591,6.401)
C4': (111.253,1.136,6.262)
C2': (109.146,1.754,7.204)
O2': (109.127,3.165,7.269)
N1: (108.081,0.188,5.517)
O4: (105.455,-2.752,4.637)
O2: (106.271,1.476,6.057)
C6: (108.551,-1.054,5.134)
C5: (107.738,-2.087,4.865)
O3': (111.189,1.873,8.572)
OP1: (101.313,-7.138,5.991)
OP2: (103.643,-6.856,7.027)
C3': (101.334,-1.909,5.719)
C1': (102.815,-1.461,7.519)
C5': (100.794,-4.245,6.790)
O4': (101.908,-2.442,7.978)
C8: (104.790,-2.975,8.168)
O2': (103.281,-0.421,5.348)
C6: (107.336,-0.713,9.058)
C5: (106.220,-1.489,8.693)
C4: (105.059,-0.808,8.405)
P: (102.208,-6.454,6.955)
C4': (100.928,-2.734,6.947)
C2': (102.789,-1.562,6.001)
C2: (105.989,1.145,8.829)
N1: (107.176,0.628,9.124)
N3: (104.873,0.526,8.453)
N6: (108.532,-1.220,9.331)
N7: (106.040,-2.863,8.552)
N9: (104.150,-1.765,8.028)
O5': (102.074,-4.883,6.686)
O3': (100.462,-0.786,5.522)
OP2: (103.643,-6.856,7.027)
C3': (101.334,-1.909,5.719)
C1': (102.815,-1.461,7.519)
C5': (100.794,-4.245,6.790)
O4': (101.908,-2.442,7.978)
C8: (104.790,-2.975,8.168)
O2': (103.281,-0.421,5.348)
C6: (107.336,-0.713,9.058)
C5: (106.220,-1.489,8.693)
C4: (105.059,-0.808,8.405)
P: (102.208,-6.454,6.955)
C4': (100.928,-2.734,6.947)
C2': (102.789,-1.562,6.001)
C2: (105.989,1.145,8.829)
N1: (107.176,0.628,9.124)
N3: (104.873,0.526,8.453)
N6: (108.532,-1.220,9.331)
N7: (106.040,-2.863,8.552)
N9: (104.150,-1.765,8.028)
O5': (102.074,-4.883,6.686)
O3': (100.462,-0.786,5.522)
Image (generated by PyMOL):