ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ4:0517:0600

Extra

PDB:
ATOM 1 O3' G A 516 10.585 140.869 94.882 1.00 58.05 O
ATOM 2 P G A 517 10.849 141.042 96.462 1.00 59.84 P
ATOM 3 OP1 G A 517 9.576 140.743 97.178 1.00 59.99 O
ATOM 4 OP2 G A 517 11.526 142.347 96.692 1.00 58.40 O
ATOM 5 O5' G A 517 11.881 139.876 96.801 1.00 58.29 O
ATOM 6 C5' G A 517 11.474 138.499 96.749 1.00 55.03 C
ATOM 7 C4' G A 517 12.668 137.590 96.919 1.00 54.16 C
ATOM 8 O4' G A 517 13.598 137.776 95.817 1.00 53.15 O
ATOM 9 C3' G A 517 13.546 137.826 98.136 1.00 52.90 C
ATOM 10 O3' G A 517 13.000 137.298 99.327 1.00 51.85 O
ATOM 11 C2' G A 517 14.807 137.087 97.730 1.00 52.57 C
ATOM 12 O2' G A 517 14.654 135.687 97.815 1.00 54.85 O
ATOM 13 C1' G A 517 14.917 137.498 96.264 1.00 51.84 C
ATOM 14 N9 G A 517 15.720 138.713 96.176 1.00 50.39 N
ATOM 15 C8 G A 517 15.286 140.015 96.197 1.00 50.17 C
ATOM 16 N7 G A 517 16.265 140.879 96.198 1.00 50.39 N
ATOM 17 C5 G A 517 17.411 140.098 96.156 1.00 50.54 C
ATOM 18 C6 G A 517 18.786 140.469 96.158 1.00 50.66 C
ATOM 19 O6 G A 517 19.280 141.603 96.216 1.00 50.40 O
ATOM 20 N1 G A 517 19.615 139.352 96.093 1.00 49.76 N
ATOM 21 C2 G A 517 19.181 138.049 96.041 1.00 49.61 C
ATOM 22 N2 G A 517 20.124 137.105 95.967 1.00 50.37 N
ATOM 23 N3 G A 517 17.913 137.695 96.056 1.00 50.57 N
ATOM 24 C4 G A 517 17.088 138.761 96.115 1.00 50.42 C
ATOM 25 P C A 518 13.274 138.043 100.722 1.00 52.41 P
ATOM 26 OP1 C A 518 12.421 137.341 101.727 1.00 52.35 O
ATOM 27 OP2 C A 518 13.151 139.515 100.544 1.00 50.29 O
ATOM 28 O5' C A 518 14.802 137.736 101.042 1.00 53.28 O
TER

ATOM 1 O3' U B 599 19.233 134.118 95.562 1.00 53.24 O
ATOM 2 P U B 600 20.121 133.141 96.483 1.00 53.21 P
ATOM 3 OP1 U B 600 21.291 133.948 96.906 1.00 54.68 O
ATOM 4 OP2 U B 600 20.341 131.866 95.771 1.00 52.63 O
ATOM 5 O5' U B 600 19.209 132.868 97.764 1.00 52.35 O
ATOM 6 C5' U B 600 19.007 133.895 98.751 1.00 53.49 C
ATOM 7 C4' U B 600 17.903 133.510 99.712 1.00 55.96 C
ATOM 8 O4' U B 600 16.668 133.299 98.978 1.00 56.02 O
ATOM 9 C3' U B 600 18.081 132.216 100.490 1.00 56.79 C
ATOM 10 O3' U B 600 18.922 132.387 101.623 1.00 57.97 O
ATOM 11 C2' U B 600 16.649 131.889 100.890 1.00 55.91 C
ATOM 12 O2' U B 600 16.184 132.650 101.985 1.00 57.92 O
ATOM 13 C1' U B 600 15.888 132.309 99.633 1.00 54.36 C
ATOM 14 N1 U B 600 15.700 131.176 98.718 1.00 52.12 N
ATOM 15 C2 U B 600 14.579 130.385 98.902 1.00 51.63 C
ATOM 16 O2 U B 600 13.733 130.613 99.750 1.00 50.76 O
ATOM 17 N3 U B 600 14.484 129.315 98.053 1.00 51.96 N
ATOM 18 C4 U B 600 15.364 128.970 97.053 1.00 51.86 C
ATOM 19 O4 U B 600 15.139 127.971 96.372 1.00 52.55 O
ATOM 20 C5 U B 600 16.484 129.848 96.913 1.00 51.60 C
ATOM 21 C6 U B 600 16.611 130.894 97.728 1.00 51.34 C
ATOM 22 P C B 601 19.498 131.098 102.388 1.00 58.61 P
ATOM 23 OP1 C B 601 20.411 131.607 103.444 1.00 59.91 O
ATOM 24 OP2 C B 601 19.993 130.114 101.394 1.00 56.46 O
ATOM 25 O5' C B 601 18.229 130.484 103.121 1.00 57.82 O
TER

Atoms:
OP1: (9.576,140.743,97.178)
OP2: (11.526,142.347,96.692)
C3': (13.546,137.826,98.136)
C1': (14.917,137.498,96.264)
C5': (11.474,138.499,96.749)
O6: (19.280,141.603,96.216)
O4': (13.598,137.776,95.817)
C8: (15.286,140.015,96.197)
C2: (19.181,138.049,96.041)
C6: (18.786,140.469,96.158)
C5: (17.411,140.098,96.156)
C4: (17.088,138.761,96.115)
P: (10.849,141.042,96.462)
C4': (12.668,137.590,96.919)
C2': (14.807,137.087,97.730)
O2': (14.654,135.687,97.815)
N1: (19.615,139.352,96.093)
N2: (20.124,137.105,95.967)
N3: (17.913,137.695,96.056)
N7: (16.265,140.879,96.198)
N9: (15.720,138.713,96.176)
O5': (11.881,139.876,96.801)
O3': (13.000,137.298,99.327)
C4: (15.364,128.970,97.053)
N3: (14.484,129.315,98.053)
OP1: (21.291,133.948,96.906)
OP2: (20.341,131.866,95.771)
C2: (14.579,130.385,98.902)
C1': (15.888,132.309,99.633)
C3': (18.081,132.216,100.490)
O5': (19.209,132.868,97.764)
O4': (16.668,133.299,98.978)
C5': (19.007,133.895,98.751)
P: (20.121,133.141,96.483)
C4': (17.903,133.510,99.712)
C2': (16.649,131.889,100.890)
O2': (16.184,132.650,101.985)
N1: (15.700,131.176,98.718)
O4: (15.139,127.971,96.372)
O2: (13.733,130.613,99.750)
C6: (16.611,130.894,97.728)
C5: (16.484,129.848,96.913)
O3': (18.922,132.387,101.623)
Image (generated by PyMOL):
PyMOL image
show in jmol