Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:0517:0600
Extra
PDB:
ATOM 1 O3' G A 516 10.018 140.336 94.739 1.00 58.37 O
ATOM 2 P G A 517 10.297 140.487 96.315 1.00 59.86 P
ATOM 3 OP1 G A 517 9.023 140.171 97.023 1.00 59.92 O
ATOM 4 OP2 G A 517 10.962 141.792 96.562 1.00 57.09 O
ATOM 5 O5' G A 517 11.329 139.313 96.623 1.00 56.96 O
ATOM 6 C5' G A 517 10.892 137.948 96.617 1.00 54.57 C
ATOM 7 C4' G A 517 12.059 137.014 96.822 1.00 53.99 C
ATOM 8 O4' G A 517 12.992 137.128 95.711 1.00 52.59 O
ATOM 9 C3' G A 517 12.940 137.268 98.034 1.00 52.92 C
ATOM 10 O3' G A 517 12.371 136.800 99.247 1.00 51.87 O
ATOM 11 C2' G A 517 14.187 136.490 97.649 1.00 52.14 C
ATOM 12 O2' G A 517 14.008 135.097 97.772 1.00 52.48 O
ATOM 13 C1' G A 517 14.309 136.860 96.170 1.00 52.03 C
ATOM 14 N9 G A 517 15.112 138.075 96.064 1.00 51.32 N
ATOM 15 C8 G A 517 14.671 139.378 96.079 1.00 50.21 C
ATOM 16 N7 G A 517 15.647 140.246 96.085 1.00 50.45 N
ATOM 17 C5 G A 517 16.799 139.469 96.052 1.00 49.84 C
ATOM 18 C6 G A 517 18.166 139.848 96.080 1.00 48.06 C
ATOM 19 O6 G A 517 18.645 140.976 96.163 1.00 46.92 O
ATOM 20 N1 G A 517 19.004 138.742 96.019 1.00 47.82 N
ATOM 21 C2 G A 517 18.581 137.437 95.955 1.00 48.42 C
ATOM 22 N2 G A 517 19.535 136.499 95.894 1.00 49.12 N
ATOM 23 N3 G A 517 17.315 137.072 95.951 1.00 49.23 N
ATOM 24 C4 G A 517 16.484 138.131 96.003 1.00 49.74 C
ATOM 25 P C A 518 12.720 137.545 100.631 1.00 51.78 P
ATOM 26 OP1 C A 518 11.892 136.866 101.673 1.00 51.21 O
ATOM 27 OP2 C A 518 12.615 139.009 100.453 1.00 50.98 O
ATOM 28 O5' C A 518 14.254 137.200 100.891 1.00 51.60 O
TER
ATOM 1 O3' U B 599 18.741 133.570 95.490 1.00 51.81 O
ATOM 2 P U B 600 19.611 132.564 96.399 1.00 53.39 P
ATOM 3 OP1 U B 600 20.791 133.355 96.836 1.00 54.39 O
ATOM 4 OP2 U B 600 19.826 131.296 95.675 1.00 52.65 O
ATOM 5 O5' U B 600 18.685 132.285 97.669 1.00 51.91 O
ATOM 6 C5' U B 600 18.457 133.324 98.643 1.00 53.38 C
ATOM 7 C4' U B 600 17.364 132.931 99.612 1.00 55.54 C
ATOM 8 O4' U B 600 16.110 132.732 98.902 1.00 54.47 O
ATOM 9 C3' U B 600 17.548 131.633 100.386 1.00 56.40 C
ATOM 10 O3' U B 600 18.426 131.787 101.500 1.00 57.07 O
ATOM 11 C2' U B 600 16.120 131.334 100.824 1.00 54.75 C
ATOM 12 O2' U B 600 15.717 132.128 101.922 1.00 55.87 O
ATOM 13 C1' U B 600 15.336 131.751 99.577 1.00 53.26 C
ATOM 14 N1 U B 600 15.129 130.610 98.676 1.00 51.70 N
ATOM 15 C2 U B 600 14.005 129.825 98.882 1.00 51.95 C
ATOM 16 O2 U B 600 13.172 130.070 99.733 1.00 54.04 O
ATOM 17 N3 U B 600 13.896 128.741 98.051 1.00 51.00 N
ATOM 18 C4 U B 600 14.765 128.378 97.046 1.00 50.70 C
ATOM 19 O4 U B 600 14.531 127.368 96.384 1.00 49.82 O
ATOM 20 C5 U B 600 15.886 129.252 96.877 1.00 50.35 C
ATOM 21 C6 U B 600 16.026 130.311 97.677 1.00 50.54 C
ATOM 22 P C B 601 19.054 130.486 102.208 1.00 57.57 P
ATOM 23 OP1 C B 601 20.031 130.979 103.211 1.00 58.97 O
ATOM 24 OP2 C B 601 19.487 129.512 101.178 1.00 56.74 O
ATOM 25 O5' C B 601 17.828 129.850 102.995 1.00 57.45 O
TER
ATOM 2 P G A 517 10.297 140.487 96.315 1.00 59.86 P
ATOM 3 OP1 G A 517 9.023 140.171 97.023 1.00 59.92 O
ATOM 4 OP2 G A 517 10.962 141.792 96.562 1.00 57.09 O
ATOM 5 O5' G A 517 11.329 139.313 96.623 1.00 56.96 O
ATOM 6 C5' G A 517 10.892 137.948 96.617 1.00 54.57 C
ATOM 7 C4' G A 517 12.059 137.014 96.822 1.00 53.99 C
ATOM 8 O4' G A 517 12.992 137.128 95.711 1.00 52.59 O
ATOM 9 C3' G A 517 12.940 137.268 98.034 1.00 52.92 C
ATOM 10 O3' G A 517 12.371 136.800 99.247 1.00 51.87 O
ATOM 11 C2' G A 517 14.187 136.490 97.649 1.00 52.14 C
ATOM 12 O2' G A 517 14.008 135.097 97.772 1.00 52.48 O
ATOM 13 C1' G A 517 14.309 136.860 96.170 1.00 52.03 C
ATOM 14 N9 G A 517 15.112 138.075 96.064 1.00 51.32 N
ATOM 15 C8 G A 517 14.671 139.378 96.079 1.00 50.21 C
ATOM 16 N7 G A 517 15.647 140.246 96.085 1.00 50.45 N
ATOM 17 C5 G A 517 16.799 139.469 96.052 1.00 49.84 C
ATOM 18 C6 G A 517 18.166 139.848 96.080 1.00 48.06 C
ATOM 19 O6 G A 517 18.645 140.976 96.163 1.00 46.92 O
ATOM 20 N1 G A 517 19.004 138.742 96.019 1.00 47.82 N
ATOM 21 C2 G A 517 18.581 137.437 95.955 1.00 48.42 C
ATOM 22 N2 G A 517 19.535 136.499 95.894 1.00 49.12 N
ATOM 23 N3 G A 517 17.315 137.072 95.951 1.00 49.23 N
ATOM 24 C4 G A 517 16.484 138.131 96.003 1.00 49.74 C
ATOM 25 P C A 518 12.720 137.545 100.631 1.00 51.78 P
ATOM 26 OP1 C A 518 11.892 136.866 101.673 1.00 51.21 O
ATOM 27 OP2 C A 518 12.615 139.009 100.453 1.00 50.98 O
ATOM 28 O5' C A 518 14.254 137.200 100.891 1.00 51.60 O
TER
ATOM 1 O3' U B 599 18.741 133.570 95.490 1.00 51.81 O
ATOM 2 P U B 600 19.611 132.564 96.399 1.00 53.39 P
ATOM 3 OP1 U B 600 20.791 133.355 96.836 1.00 54.39 O
ATOM 4 OP2 U B 600 19.826 131.296 95.675 1.00 52.65 O
ATOM 5 O5' U B 600 18.685 132.285 97.669 1.00 51.91 O
ATOM 6 C5' U B 600 18.457 133.324 98.643 1.00 53.38 C
ATOM 7 C4' U B 600 17.364 132.931 99.612 1.00 55.54 C
ATOM 8 O4' U B 600 16.110 132.732 98.902 1.00 54.47 O
ATOM 9 C3' U B 600 17.548 131.633 100.386 1.00 56.40 C
ATOM 10 O3' U B 600 18.426 131.787 101.500 1.00 57.07 O
ATOM 11 C2' U B 600 16.120 131.334 100.824 1.00 54.75 C
ATOM 12 O2' U B 600 15.717 132.128 101.922 1.00 55.87 O
ATOM 13 C1' U B 600 15.336 131.751 99.577 1.00 53.26 C
ATOM 14 N1 U B 600 15.129 130.610 98.676 1.00 51.70 N
ATOM 15 C2 U B 600 14.005 129.825 98.882 1.00 51.95 C
ATOM 16 O2 U B 600 13.172 130.070 99.733 1.00 54.04 O
ATOM 17 N3 U B 600 13.896 128.741 98.051 1.00 51.00 N
ATOM 18 C4 U B 600 14.765 128.378 97.046 1.00 50.70 C
ATOM 19 O4 U B 600 14.531 127.368 96.384 1.00 49.82 O
ATOM 20 C5 U B 600 15.886 129.252 96.877 1.00 50.35 C
ATOM 21 C6 U B 600 16.026 130.311 97.677 1.00 50.54 C
ATOM 22 P C B 601 19.054 130.486 102.208 1.00 57.57 P
ATOM 23 OP1 C B 601 20.031 130.979 103.211 1.00 58.97 O
ATOM 24 OP2 C B 601 19.487 129.512 101.178 1.00 56.74 O
ATOM 25 O5' C B 601 17.828 129.850 102.995 1.00 57.45 O
TER
Atoms:
OP1: (9.023,140.171,97.023)
OP2: (10.962,141.792,96.562)
C3': (12.940,137.268,98.034)
C1': (14.309,136.860,96.170)
C5': (10.892,137.948,96.617)
O6: (18.645,140.976,96.163)
O4': (12.992,137.128,95.711)
C8: (14.671,139.378,96.079)
C2: (18.581,137.437,95.955)
C6: (18.166,139.848,96.080)
C5: (16.799,139.469,96.052)
C4: (16.484,138.131,96.003)
P: (10.297,140.487,96.315)
C4': (12.059,137.014,96.822)
C2': (14.187,136.490,97.649)
O2': (14.008,135.097,97.772)
N1: (19.004,138.742,96.019)
N2: (19.535,136.499,95.894)
N3: (17.315,137.072,95.951)
N7: (15.647,140.246,96.085)
N9: (15.112,138.075,96.064)
O5': (11.329,139.313,96.623)
O3': (12.371,136.800,99.247)
OP2: (10.962,141.792,96.562)
C3': (12.940,137.268,98.034)
C1': (14.309,136.860,96.170)
C5': (10.892,137.948,96.617)
O6: (18.645,140.976,96.163)
O4': (12.992,137.128,95.711)
C8: (14.671,139.378,96.079)
C2: (18.581,137.437,95.955)
C6: (18.166,139.848,96.080)
C5: (16.799,139.469,96.052)
C4: (16.484,138.131,96.003)
P: (10.297,140.487,96.315)
C4': (12.059,137.014,96.822)
C2': (14.187,136.490,97.649)
O2': (14.008,135.097,97.772)
N1: (19.004,138.742,96.019)
N2: (19.535,136.499,95.894)
N3: (17.315,137.072,95.951)
N7: (15.647,140.246,96.085)
N9: (15.112,138.075,96.064)
O5': (11.329,139.313,96.623)
O3': (12.371,136.800,99.247)
C4: (14.765,128.378,97.046)
N3: (13.896,128.741,98.051)
OP1: (20.791,133.355,96.836)
OP2: (19.826,131.296,95.675)
C2: (14.005,129.825,98.882)
C1': (15.336,131.751,99.577)
C3': (17.548,131.633,100.386)
O5': (18.685,132.285,97.669)
O4': (16.110,132.732,98.902)
C5': (18.457,133.324,98.643)
P: (19.611,132.564,96.399)
C4': (17.364,132.931,99.612)
C2': (16.120,131.334,100.824)
O2': (15.717,132.128,101.922)
N1: (15.129,130.610,98.676)
O4: (14.531,127.368,96.384)
O2: (13.172,130.070,99.733)
C6: (16.026,130.311,97.677)
C5: (15.886,129.252,96.877)
O3': (18.426,131.787,101.500)
N3: (13.896,128.741,98.051)
OP1: (20.791,133.355,96.836)
OP2: (19.826,131.296,95.675)
C2: (14.005,129.825,98.882)
C1': (15.336,131.751,99.577)
C3': (17.548,131.633,100.386)
O5': (18.685,132.285,97.669)
O4': (16.110,132.732,98.902)
C5': (18.457,133.324,98.643)
P: (19.611,132.564,96.399)
C4': (17.364,132.931,99.612)
C2': (16.120,131.334,100.824)
O2': (15.717,132.128,101.922)
N1: (15.129,130.610,98.676)
O4: (14.531,127.368,96.384)
O2: (13.172,130.070,99.733)
C6: (16.026,130.311,97.677)
C5: (15.886,129.252,96.877)
O3': (18.426,131.787,101.500)
Image (generated by PyMOL):