ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:0517:0600

Extra

PDB:
ATOM 1 O3' G A 516 10.306 139.203 94.851 1.00 46.76 O
ATOM 2 P G A 517 10.533 139.334 96.439 1.00 44.84 P
ATOM 3 OP1 G A 517 9.263 138.948 97.097 1.00 49.09 O
ATOM 4 OP2 G A 517 11.129 140.659 96.730 1.00 44.62 O
ATOM 5 O5' G A 517 11.594 138.195 96.765 1.00 43.98 O
ATOM 6 C5' G A 517 11.246 136.815 96.615 1.00 41.33 C
ATOM 7 C4' G A 517 12.459 135.937 96.814 1.00 42.33 C
ATOM 8 O4' G A 517 13.379 136.072 95.698 1.00 43.05 O
ATOM 9 C3' G A 517 13.340 136.227 98.017 1.00 41.63 C
ATOM 10 O3' G A 517 12.804 135.753 99.236 1.00 41.48 O
ATOM 11 C2' G A 517 14.604 135.478 97.636 1.00 42.58 C
ATOM 12 O2' G A 517 14.456 134.085 97.804 1.00 43.08 O
ATOM 13 C1' G A 517 14.708 135.827 96.150 1.00 42.67 C
ATOM 14 N9 G A 517 15.486 137.056 96.010 1.00 42.46 N
ATOM 15 C8 G A 517 15.008 138.343 95.974 1.00 40.17 C
ATOM 16 N7 G A 517 15.957 139.237 95.951 1.00 43.65 N
ATOM 17 C5 G A 517 17.133 138.497 95.951 1.00 41.90 C
ATOM 18 C6 G A 517 18.487 138.922 95.953 1.00 42.18 C
ATOM 19 O6 G A 517 18.927 140.076 95.965 1.00 44.29 O
ATOM 20 N1 G A 517 19.366 137.842 95.947 1.00 40.38 N
ATOM 21 C2 G A 517 18.987 136.521 95.938 1.00 41.62 C
ATOM 22 N2 G A 517 19.975 135.614 95.912 1.00 41.49 N
ATOM 23 N3 G A 517 17.728 136.114 95.948 1.00 42.02 N
ATOM 24 C4 G A 517 16.860 137.149 95.956 1.00 41.72 C
ATOM 25 P C A 518 13.065 136.577 100.592 1.00 42.75 P
ATOM 26 OP1 C A 518 12.200 135.962 101.648 1.00 42.93 O
ATOM 27 OP2 C A 518 12.965 138.022 100.308 1.00 41.44 O
ATOM 28 O5' C A 518 14.576 136.253 100.961 1.00 41.81 O
TER

ATOM 1 O3' U B 599 19.253 132.486 95.543 1.00 43.01 O
ATOM 2 P U B 600 20.045 131.497 96.539 1.00 44.22 P
ATOM 3 OP1 U B 600 21.189 132.299 97.039 1.00 47.36 O
ATOM 4 OP2 U B 600 20.298 130.193 95.878 1.00 41.93 O
ATOM 5 O5' U B 600 19.045 131.272 97.761 1.00 42.76 O
ATOM 6 C5' U B 600 18.773 132.342 98.683 1.00 43.83 C
ATOM 7 C4' U B 600 17.695 131.945 99.660 1.00 45.47 C
ATOM 8 O4' U B 600 16.458 131.673 98.950 1.00 44.17 O
ATOM 9 C3' U B 600 17.937 130.682 100.468 1.00 45.69 C
ATOM 10 O3' U B 600 18.788 130.935 101.579 1.00 48.52 O
ATOM 11 C2' U B 600 16.524 130.317 100.899 1.00 44.05 C
ATOM 12 O2' U B 600 16.061 131.107 101.974 1.00 42.86 O
ATOM 13 C1' U B 600 15.728 130.675 99.642 1.00 43.21 C
ATOM 14 N1 U B 600 15.537 129.524 98.748 1.00 43.66 N
ATOM 15 C2 U B 600 14.424 128.727 98.960 1.00 43.20 C
ATOM 16 O2 U B 600 13.612 128.942 99.842 1.00 44.40 O
ATOM 17 N3 U B 600 14.299 127.670 98.101 1.00 41.94 N
ATOM 18 C4 U B 600 15.143 127.334 97.071 1.00 41.61 C
ATOM 19 O4 U B 600 14.883 126.353 96.374 1.00 40.66 O
ATOM 20 C5 U B 600 16.272 128.198 96.916 1.00 41.89 C
ATOM 21 C6 U B 600 16.427 129.237 97.737 1.00 42.86 C
ATOM 22 P C B 601 19.396 129.705 102.421 1.00 48.85 P
ATOM 23 OP1 C B 601 20.225 130.295 103.499 1.00 47.52 O
ATOM 24 OP2 C B 601 19.992 128.732 101.478 1.00 45.39 O
ATOM 25 O5' C B 601 18.129 129.037 103.112 1.00 48.93 O
TER

Atoms:
OP1: (9.263,138.948,97.097)
OP2: (11.129,140.659,96.730)
C3': (13.340,136.227,98.017)
C1': (14.708,135.827,96.150)
C5': (11.246,136.815,96.615)
O6: (18.927,140.076,95.965)
O4': (13.379,136.072,95.698)
C8: (15.008,138.343,95.974)
C2: (18.987,136.521,95.938)
C6: (18.487,138.922,95.953)
C5: (17.133,138.497,95.951)
C4: (16.860,137.149,95.956)
P: (10.533,139.334,96.439)
C4': (12.459,135.937,96.814)
C2': (14.604,135.478,97.636)
O2': (14.456,134.085,97.804)
N1: (19.366,137.842,95.947)
N2: (19.975,135.614,95.912)
N3: (17.728,136.114,95.948)
N7: (15.957,139.237,95.951)
N9: (15.486,137.056,96.010)
O5': (11.594,138.195,96.765)
O3': (12.804,135.753,99.236)
C4: (15.143,127.334,97.071)
N3: (14.299,127.670,98.101)
OP1: (21.189,132.299,97.039)
OP2: (20.298,130.193,95.878)
C2: (14.424,128.727,98.960)
C1': (15.728,130.675,99.642)
C3': (17.937,130.682,100.468)
O5': (19.045,131.272,97.761)
O4': (16.458,131.673,98.950)
C5': (18.773,132.342,98.683)
P: (20.045,131.497,96.539)
C4': (17.695,131.945,99.660)
C2': (16.524,130.317,100.899)
O2': (16.061,131.107,101.974)
N1: (15.537,129.524,98.748)
O4: (14.883,126.353,96.374)
O2: (13.612,128.942,99.842)
C6: (16.427,129.237,97.737)
C5: (16.272,128.198,96.916)
O3': (18.788,130.935,101.579)
Image (generated by PyMOL):
PyMOL image
show in jmol