ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A607:A608

Extra

PDB:
ATOM 1 O3' G A 606 30.975 113.685 99.685 1.00 27.36 O
ATOM 2 P U A 607 32.183 113.914 100.715 1.00 29.53 P
ATOM 3 OP1 U A 607 32.997 112.681 100.659 1.00 27.79 O
ATOM 4 OP2 U A 607 31.696 114.423 102.029 1.00 27.68 O
ATOM 5 O5' U A 607 33.049 115.065 100.040 1.00 29.70 O
ATOM 6 C5' U A 607 32.534 116.399 99.852 1.00 30.07 C
ATOM 7 C4' U A 607 33.680 117.342 99.613 1.00 29.91 C
ATOM 8 O4' U A 607 34.507 117.332 100.794 1.00 29.51 O
ATOM 9 C3' U A 607 34.615 116.886 98.505 1.00 30.03 C
ATOM 10 O3' U A 607 34.155 117.381 97.264 1.00 27.58 O
ATOM 11 C2' U A 607 35.939 117.523 98.890 1.00 32.04 C
ATOM 12 O2' U A 607 36.027 118.880 98.482 1.00 34.10 O
ATOM 13 C1' U A 607 35.864 117.467 100.417 1.00 31.70 C
ATOM 14 N1 U A 607 36.643 116.396 101.048 1.00 30.90 N
ATOM 15 C2 U A 607 37.861 116.751 101.576 1.00 32.22 C
ATOM 16 O2 U A 607 38.323 117.885 101.481 1.00 33.53 O
ATOM 17 N3 U A 607 38.527 115.745 102.218 1.00 32.78 N
ATOM 18 C4 U A 607 38.116 114.444 102.376 1.00 33.98 C
ATOM 19 O4 U A 607 38.766 113.691 103.108 1.00 35.27 O
ATOM 20 C5 U A 607 36.860 114.142 101.763 1.00 33.93 C
ATOM 21 C6 U A 607 36.181 115.107 101.135 1.00 33.01 C
ATOM 22 P A A 608 33.811 116.366 96.085 1.00 29.16 P
ATOM 23 OP1 A A 608 32.576 116.877 95.456 1.00 26.99 O
ATOM 24 OP2 A A 608 33.851 114.982 96.613 1.00 29.56 O
ATOM 25 O5' A A 608 35.015 116.522 95.054 1.00 28.37 O
TER

ATOM 1 O3' U B 607 34.155 117.381 97.264 1.00 27.58 O
ATOM 2 P A B 608 33.811 116.366 96.085 1.00 29.16 P
ATOM 3 OP1 A B 608 32.576 116.877 95.456 1.00 26.99 O
ATOM 4 OP2 A B 608 33.851 114.982 96.613 1.00 29.56 O
ATOM 5 O5' A B 608 35.015 116.522 95.054 1.00 28.37 O
ATOM 6 C5' A B 608 35.462 117.809 94.637 1.00 24.03 C
ATOM 7 C4' A B 608 34.741 118.251 93.386 1.00 21.61 C
ATOM 8 O4' A B 608 35.080 119.640 93.197 1.00 22.98 O
ATOM 9 C3' A B 608 35.115 117.565 92.075 1.00 20.57 C
ATOM 10 O3' A B 608 34.279 116.438 91.786 1.00 19.76 O
ATOM 11 C2' A B 608 34.846 118.658 91.058 1.00 21.01 C
ATOM 12 O2' A B 608 33.463 118.741 90.788 1.00 22.20 O
ATOM 13 C1' A B 608 35.279 119.903 91.827 1.00 21.74 C
ATOM 14 N9 A B 608 36.682 120.258 91.644 1.00 22.73 N
ATOM 15 C8 A B 608 37.726 120.070 92.516 1.00 22.81 C
ATOM 16 N7 A B 608 38.872 120.507 92.067 1.00 23.03 N
ATOM 17 C5 A B 608 38.564 121.013 90.813 1.00 23.53 C
ATOM 18 C6 A B 608 39.348 121.619 89.833 1.00 23.59 C
ATOM 19 N6 A B 608 40.658 121.821 89.967 1.00 27.79 N
ATOM 20 N1 A B 608 38.743 122.017 88.698 1.00 22.44 N
ATOM 21 C2 A B 608 37.434 121.807 88.570 1.00 24.86 C
ATOM 22 N3 A B 608 36.583 121.240 89.423 1.00 25.82 N
ATOM 23 C4 A B 608 37.221 120.863 90.541 1.00 23.72 C
ATOM 24 P C B 609 34.811 115.263 90.824 1.00 23.59 P
ATOM 25 OP1 C B 609 33.697 114.350 90.480 1.00 22.94 O
ATOM 26 OP2 C B 609 36.025 114.713 91.477 1.00 24.38 O
ATOM 27 O5' C B 609 35.241 115.991 89.476 1.00 21.04 O
TER

Atoms:
C4: (38.116,114.444,102.376)
N3: (38.527,115.745,102.218)
OP1: (32.997,112.681,100.659)
OP2: (31.696,114.423,102.029)
C2: (37.861,116.751,101.576)
C1': (35.864,117.467,100.417)
C3': (34.615,116.886,98.505)
O5': (33.049,115.065,100.040)
O4': (34.507,117.332,100.794)
C5': (32.534,116.399,99.852)
P: (32.183,113.914,100.715)
C4': (33.680,117.342,99.613)
C2': (35.939,117.523,98.890)
O2': (36.027,118.880,98.482)
N1: (36.643,116.396,101.048)
O4: (38.766,113.691,103.108)
O2: (38.323,117.885,101.481)
C6: (36.181,115.107,101.135)
C5: (36.860,114.142,101.763)
O3': (34.155,117.381,97.264)
OP1: (32.576,116.877,95.456)
OP2: (33.851,114.982,96.613)
C3': (35.115,117.565,92.075)
C1': (35.279,119.903,91.827)
C5': (35.462,117.809,94.637)
O4': (35.080,119.640,93.197)
C8: (37.726,120.070,92.516)
O2': (33.463,118.741,90.788)
C6: (39.348,121.619,89.833)
C5: (38.564,121.013,90.813)
C4: (37.221,120.863,90.541)
P: (33.811,116.366,96.085)
C4': (34.741,118.251,93.386)
C2': (34.846,118.658,91.058)
C2: (37.434,121.807,88.570)
N1: (38.743,122.017,88.698)
N3: (36.583,121.240,89.423)
N6: (40.658,121.821,89.967)
N7: (38.872,120.507,92.067)
N9: (36.682,120.258,91.644)
O5': (35.015,116.522,95.054)
O3': (34.279,116.438,91.786)
Image (generated by PyMOL):
PyMOL image
show in jmol