ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:02117:02063

Extra

PDB:
ATOM 1 O3' G A2116 98.204 107.534 67.255 1.00 59.85 O
ATOM 2 P G A2117 97.382 106.883 68.473 1.00 59.55 P
ATOM 3 OP1 G A2117 98.315 106.863 69.640 1.00 56.40 O
ATOM 4 OP2 G A2117 96.705 105.631 68.042 1.00 57.68 O
ATOM 5 O5' G A2117 96.228 107.942 68.739 1.00 55.03 O
ATOM 6 C5' G A2117 96.283 108.812 69.865 1.00 47.38 C
ATOM 7 C4' G A2117 95.456 110.032 69.602 1.00 42.61 C
ATOM 8 O4' G A2117 94.139 109.634 69.151 1.00 39.91 O
ATOM 9 C3' G A2117 95.245 110.911 70.817 1.00 42.07 C
ATOM 10 O3' G A2117 95.151 112.254 70.369 1.00 44.21 O
ATOM 11 C2' G A2117 93.929 110.387 71.379 1.00 40.35 C
ATOM 12 O2' G A2117 93.242 111.360 72.140 1.00 37.62 O
ATOM 13 C1' G A2117 93.169 110.029 70.097 1.00 39.14 C
ATOM 14 N9 G A2117 92.199 108.938 70.211 1.00 37.00 N
ATOM 15 C8 G A2117 90.941 108.922 69.666 1.00 39.08 C
ATOM 16 N7 G A2117 90.296 107.811 69.895 1.00 38.55 N
ATOM 17 C5 G A2117 91.179 107.044 70.643 1.00 37.33 C
ATOM 18 C6 G A2117 91.031 105.732 71.184 1.00 37.43 C
ATOM 19 O6 G A2117 90.072 104.970 71.097 1.00 41.22 O
ATOM 20 N1 G A2117 92.160 105.336 71.886 1.00 36.71 N
ATOM 21 C2 G A2117 93.288 106.095 72.050 1.00 35.12 C
ATOM 22 N2 G A2117 94.260 105.540 72.791 1.00 35.36 N
ATOM 23 N3 G A2117 93.448 107.309 71.537 1.00 36.00 N
ATOM 24 C4 G A2117 92.357 107.721 70.855 1.00 35.80 C
ATOM 25 P G A2118 96.450 113.201 70.420 1.00 42.41 P
ATOM 26 OP1 G A2118 97.661 112.368 70.499 1.00 42.56 O
ATOM 27 OP2 G A2118 96.187 114.198 71.476 1.00 44.31 O
ATOM 28 O5' G A2118 96.425 113.899 68.994 1.00 41.90 O
TER

ATOM 1 O3' U B2062 96.638 106.362 76.024 1.00 37.76 O
ATOM 2 P U B2063 97.256 105.650 74.718 1.00 41.92 P
ATOM 3 OP1 U B2063 98.694 105.426 74.976 1.00 43.36 O
ATOM 4 OP2 U B2063 96.841 106.404 73.501 1.00 40.85 O
ATOM 5 O5' U B2063 96.579 104.203 74.706 1.00 43.11 O
ATOM 6 C5' U B2063 96.716 103.328 73.564 1.00 46.23 C
ATOM 7 C4' U B2063 96.739 101.880 74.003 1.00 47.94 C
ATOM 8 O4' U B2063 97.980 101.593 74.703 1.00 53.23 O
ATOM 9 C3' U B2063 95.662 101.475 74.995 1.00 48.40 C
ATOM 10 O3' U B2063 94.426 101.206 74.363 1.00 44.75 O
ATOM 11 C2' U B2063 96.268 100.231 75.627 1.00 51.68 C
ATOM 12 O2' U B2063 96.186 99.096 74.788 1.00 51.52 O
ATOM 13 C1' U B2063 97.735 100.652 75.746 1.00 53.40 C
ATOM 14 N1 U B2063 98.021 101.290 77.047 1.00 57.45 N
ATOM 15 C2 U B2063 98.180 100.462 78.158 1.00 58.52 C
ATOM 16 O2 U B2063 98.113 99.242 78.100 1.00 59.56 O
ATOM 17 N3 U B2063 98.419 101.119 79.340 1.00 59.41 N
ATOM 18 C4 U B2063 98.523 102.482 79.529 1.00 60.60 C
ATOM 19 O4 U B2063 98.743 102.918 80.661 1.00 62.82 O
ATOM 20 C5 U B2063 98.358 103.268 78.342 1.00 59.02 C
ATOM 21 C6 U B2063 98.119 102.664 77.174 1.00 57.77 C
ATOM 22 P A B2064 93.167 102.164 74.637 1.00 41.77 P
ATOM 23 OP1 A B2064 93.112 103.157 73.529 1.00 38.39 O
ATOM 24 OP2 A B2064 93.191 102.632 76.056 1.00 38.76 O
ATOM 25 O5' A B2064 91.912 101.206 74.461 1.00 39.93 O
TER

Atoms:
OP1: (98.315,106.863,69.640)
OP2: (96.705,105.631,68.042)
C3': (95.245,110.911,70.817)
C1': (93.169,110.029,70.097)
C5': (96.283,108.812,69.865)
O6: (90.072,104.970,71.097)
O4': (94.139,109.634,69.151)
C8: (90.941,108.922,69.666)
C2: (93.288,106.095,72.050)
C6: (91.031,105.732,71.184)
C5: (91.179,107.044,70.643)
C4: (92.357,107.721,70.855)
P: (97.382,106.883,68.473)
C4': (95.456,110.032,69.602)
C2': (93.929,110.387,71.379)
O2': (93.242,111.360,72.140)
N1: (92.160,105.336,71.886)
N2: (94.260,105.540,72.791)
N3: (93.448,107.309,71.537)
N7: (90.296,107.811,69.895)
N9: (92.199,108.938,70.211)
O5': (96.228,107.942,68.739)
O3': (95.151,112.254,70.369)
C4: (98.523,102.482,79.529)
N3: (98.419,101.119,79.340)
OP1: (98.694,105.426,74.976)
OP2: (96.841,106.404,73.501)
C2: (98.180,100.462,78.158)
C1': (97.735,100.652,75.746)
C3': (95.662,101.475,74.995)
O5': (96.579,104.203,74.706)
O4': (97.980,101.593,74.703)
C5': (96.716,103.328,73.564)
P: (97.256,105.650,74.718)
C4': (96.739,101.880,74.003)
C2': (96.268,100.231,75.627)
O2': (96.186,99.096,74.788)
N1: (98.021,101.290,77.047)
O4: (98.743,102.918,80.661)
O2: (98.113,99.242,78.100)
C6: (98.119,102.664,77.174)
C5: (98.358,103.268,78.342)
O3': (94.426,101.206,74.363)
Image (generated by PyMOL):
PyMOL image
show in jmol