ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ8:0607:0608

Extra

PDB:
ATOM 1 O3' G A 606 31.057 112.928 99.969 1.00 41.02 O
ATOM 2 P U A 607 32.277 113.240 100.967 1.00 41.66 P
ATOM 3 OP1 U A 607 33.174 112.046 100.914 1.00 40.09 O
ATOM 4 OP2 U A 607 31.798 113.760 102.288 1.00 40.82 O
ATOM 5 O5' U A 607 33.074 114.402 100.234 1.00 41.31 O
ATOM 6 C5' U A 607 32.626 115.764 100.257 1.00 40.37 C
ATOM 7 C4' U A 607 33.795 116.668 99.955 1.00 39.77 C
ATOM 8 O4' U A 607 34.682 116.669 101.101 1.00 38.53 O
ATOM 9 C3' U A 607 34.670 116.204 98.794 1.00 38.71 C
ATOM 10 O3' U A 607 34.170 116.720 97.559 1.00 39.22 O
ATOM 11 C2' U A 607 36.025 116.821 99.134 1.00 38.46 C
ATOM 12 O2' U A 607 36.096 118.184 98.776 1.00 37.43 O
ATOM 13 C1' U A 607 36.022 116.761 100.663 1.00 37.22 C
ATOM 14 N1 U A 607 36.798 115.693 101.311 1.00 36.55 N
ATOM 15 C2 U A 607 38.034 116.033 101.830 1.00 36.94 C
ATOM 16 O2 U A 607 38.543 117.144 101.682 1.00 40.44 O
ATOM 17 N3 U A 607 38.660 115.035 102.529 1.00 35.04 N
ATOM 18 C4 U A 607 38.199 113.756 102.749 1.00 35.98 C
ATOM 19 O4 U A 607 38.812 113.023 103.535 1.00 35.82 O
ATOM 20 C5 U A 607 36.942 113.461 102.128 1.00 34.72 C
ATOM 21 C6 U A 607 36.304 114.414 101.444 1.00 36.15 C
ATOM 22 P A A 608 33.748 115.720 96.369 1.00 39.04 P
ATOM 23 OP1 A A 608 32.555 116.336 95.720 1.00 38.93 O
ATOM 24 OP2 A A 608 33.675 114.328 96.863 1.00 41.43 O
ATOM 25 O5' A A 608 34.959 115.753 95.332 1.00 39.40 O
TER

ATOM 1 O3' U B 607 34.170 116.720 97.559 1.00 39.22 O
ATOM 2 P A B 608 33.748 115.720 96.369 1.00 39.04 P
ATOM 3 OP1 A B 608 32.555 116.336 95.720 1.00 38.93 O
ATOM 4 OP2 A B 608 33.675 114.328 96.863 1.00 41.43 O
ATOM 5 O5' A B 608 34.959 115.753 95.332 1.00 39.40 O
ATOM 6 C5' A B 608 35.506 116.983 94.874 1.00 34.13 C
ATOM 7 C4' A B 608 34.776 117.462 93.646 1.00 31.76 C
ATOM 8 O4' A B 608 35.100 118.861 93.479 1.00 33.09 O
ATOM 9 C3' A B 608 35.100 116.806 92.303 1.00 31.11 C
ATOM 10 O3' A B 608 34.239 115.696 92.044 1.00 30.69 O
ATOM 11 C2' A B 608 34.782 117.933 91.329 1.00 30.72 C
ATOM 12 O2' A B 608 33.386 118.098 91.170 1.00 29.61 O
ATOM 13 C1' A B 608 35.280 119.151 92.109 1.00 32.69 C
ATOM 14 N9 A B 608 36.692 119.481 91.918 1.00 33.90 N
ATOM 15 C8 A B 608 37.723 119.239 92.790 1.00 32.18 C
ATOM 16 N7 A B 608 38.879 119.685 92.378 1.00 33.90 N
ATOM 17 C5 A B 608 38.596 120.254 91.146 1.00 33.48 C
ATOM 18 C6 A B 608 39.401 120.906 90.210 1.00 33.24 C
ATOM 19 N6 A B 608 40.704 121.115 90.390 1.00 32.48 N
ATOM 20 N1 A B 608 38.817 121.348 89.072 1.00 33.52 N
ATOM 21 C2 A B 608 37.503 121.146 88.907 1.00 33.46 C
ATOM 22 N3 A B 608 36.635 120.548 89.724 1.00 34.74 N
ATOM 23 C4 A B 608 37.255 120.121 90.841 1.00 33.79 C
ATOM 24 P C B 609 34.717 114.497 91.080 1.00 31.19 P
ATOM 25 OP1 C B 609 33.500 113.704 90.771 1.00 32.37 O
ATOM 26 OP2 C B 609 35.887 113.827 91.708 1.00 29.93 O
ATOM 27 O5' C B 609 35.185 115.202 89.731 1.00 30.59 O
TER

Atoms:
C4: (38.199,113.756,102.749)
N3: (38.660,115.035,102.529)
OP1: (33.174,112.046,100.914)
OP2: (31.798,113.760,102.288)
C2: (38.034,116.033,101.830)
C1': (36.022,116.761,100.663)
C3': (34.670,116.204,98.794)
O5': (33.074,114.402,100.234)
O4': (34.682,116.669,101.101)
C5': (32.626,115.764,100.257)
P: (32.277,113.240,100.967)
C4': (33.795,116.668,99.955)
C2': (36.025,116.821,99.134)
O2': (36.096,118.184,98.776)
N1: (36.798,115.693,101.311)
O4: (38.812,113.023,103.535)
O2: (38.543,117.144,101.682)
C6: (36.304,114.414,101.444)
C5: (36.942,113.461,102.128)
O3': (34.170,116.720,97.559)
OP1: (32.555,116.336,95.720)
OP2: (33.675,114.328,96.863)
C3': (35.100,116.806,92.303)
C1': (35.280,119.151,92.109)
C5': (35.506,116.983,94.874)
O4': (35.100,118.861,93.479)
C8: (37.723,119.239,92.790)
O2': (33.386,118.098,91.170)
C6: (39.401,120.906,90.210)
C5: (38.596,120.254,91.146)
C4: (37.255,120.121,90.841)
P: (33.748,115.720,96.369)
C4': (34.776,117.462,93.646)
C2': (34.782,117.933,91.329)
C2: (37.503,121.146,88.907)
N1: (38.817,121.348,89.072)
N3: (36.635,120.548,89.724)
N6: (40.704,121.115,90.390)
N7: (38.879,119.685,92.378)
N9: (36.692,119.481,91.918)
O5': (34.959,115.753,95.332)
O3': (34.239,115.696,92.044)
Image (generated by PyMOL):
PyMOL image
show in jmol