ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ9:0607:0608

Extra

PDB:
ATOM 1 O3' G A 606 31.088 113.069 99.854 1.00 41.09 O
ATOM 2 P U A 607 32.317 113.416 100.822 1.00 42.33 P
ATOM 3 OP1 U A 607 33.180 112.199 100.777 1.00 38.72 O
ATOM 4 OP2 U A 607 31.829 113.952 102.133 1.00 40.19 O
ATOM 5 O5' U A 607 33.109 114.564 100.053 1.00 41.95 O
ATOM 6 C5' U A 607 32.698 115.945 100.083 1.00 40.03 C
ATOM 7 C4' U A 607 33.898 116.823 99.812 1.00 39.46 C
ATOM 8 O4' U A 607 34.768 116.773 100.966 1.00 39.42 O
ATOM 9 C3' U A 607 34.789 116.352 98.667 1.00 39.14 C
ATOM 10 O3' U A 607 34.324 116.857 97.423 1.00 37.40 O
ATOM 11 C2' U A 607 36.150 116.940 99.027 1.00 40.23 C
ATOM 12 O2' U A 607 36.288 118.295 98.658 1.00 42.90 O
ATOM 13 C1' U A 607 36.116 116.884 100.553 1.00 38.74 C
ATOM 14 N1 U A 607 36.887 115.814 101.197 1.00 38.92 N
ATOM 15 C2 U A 607 38.135 116.139 101.687 1.00 39.66 C
ATOM 16 O2 U A 607 38.660 117.243 101.518 1.00 41.21 O
ATOM 17 N3 U A 607 38.754 115.132 102.381 1.00 38.15 N
ATOM 18 C4 U A 607 38.275 113.862 102.613 1.00 37.98 C
ATOM 19 O4 U A 607 38.943 113.076 103.292 1.00 39.36 O
ATOM 20 C5 U A 607 37.007 113.588 102.021 1.00 36.32 C
ATOM 21 C6 U A 607 36.374 114.547 101.349 1.00 37.97 C
ATOM 22 P A A 608 33.868 115.842 96.269 1.00 37.62 P
ATOM 23 OP1 A A 608 32.647 116.416 95.644 1.00 37.57 O
ATOM 24 OP2 A A 608 33.829 114.467 96.829 1.00 38.13 O
ATOM 25 O5' A A 608 35.044 115.892 95.192 1.00 36.35 O
TER

ATOM 1 O3' U B 607 34.324 116.857 97.423 1.00 37.40 O
ATOM 2 P A B 608 33.868 115.842 96.269 1.00 37.62 P
ATOM 3 OP1 A B 608 32.647 116.416 95.644 1.00 37.57 O
ATOM 4 OP2 A B 608 33.829 114.467 96.829 1.00 38.13 O
ATOM 5 O5' A B 608 35.044 115.892 95.192 1.00 36.35 O
ATOM 6 C5' A B 608 35.561 117.139 94.719 1.00 32.34 C
ATOM 7 C4' A B 608 34.803 117.600 93.493 1.00 30.47 C
ATOM 8 O4' A B 608 35.082 119.007 93.302 1.00 31.57 O
ATOM 9 C3' A B 608 35.119 116.940 92.156 1.00 29.51 C
ATOM 10 O3' A B 608 34.287 115.807 91.945 1.00 29.50 O
ATOM 11 C2' A B 608 34.774 118.054 91.177 1.00 30.37 C
ATOM 12 O2' A B 608 33.375 118.233 91.060 1.00 29.34 O
ATOM 13 C1' A B 608 35.286 119.277 91.933 1.00 29.98 C
ATOM 14 N9 A B 608 36.702 119.602 91.754 1.00 29.71 N
ATOM 15 C8 A B 608 37.720 119.382 92.651 1.00 28.02 C
ATOM 16 N7 A B 608 38.883 119.830 92.252 1.00 28.73 N
ATOM 17 C5 A B 608 38.620 120.373 91.003 1.00 29.44 C
ATOM 18 C6 A B 608 39.437 121.015 90.068 1.00 29.12 C
ATOM 19 N6 A B 608 40.732 121.247 90.268 1.00 29.28 N
ATOM 20 N1 A B 608 38.872 121.425 88.909 1.00 29.37 N
ATOM 21 C2 A B 608 37.569 121.209 88.723 1.00 28.69 C
ATOM 22 N3 A B 608 36.690 120.622 89.533 1.00 30.93 N
ATOM 23 C4 A B 608 37.286 120.222 90.673 1.00 30.39 C
ATOM 24 P C B 609 34.752 114.622 90.956 1.00 29.97 P
ATOM 25 OP1 C B 609 33.521 113.845 90.619 1.00 31.27 O
ATOM 26 OP2 C B 609 35.912 113.916 91.559 1.00 29.80 O
ATOM 27 O5' C B 609 35.233 115.356 89.627 1.00 28.41 O
TER

Atoms:
C4: (38.275,113.862,102.613)
N3: (38.754,115.132,102.381)
OP1: (33.180,112.199,100.777)
OP2: (31.829,113.952,102.133)
C2: (38.135,116.139,101.687)
C1': (36.116,116.884,100.553)
C3': (34.789,116.352,98.667)
O5': (33.109,114.564,100.053)
O4': (34.768,116.773,100.966)
C5': (32.698,115.945,100.083)
P: (32.317,113.416,100.822)
C4': (33.898,116.823,99.812)
C2': (36.150,116.940,99.027)
O2': (36.288,118.295,98.658)
N1: (36.887,115.814,101.197)
O4: (38.943,113.076,103.292)
O2: (38.660,117.243,101.518)
C6: (36.374,114.547,101.349)
C5: (37.007,113.588,102.021)
O3': (34.324,116.857,97.423)
OP1: (32.647,116.416,95.644)
OP2: (33.829,114.467,96.829)
C3': (35.119,116.940,92.156)
C1': (35.286,119.277,91.933)
C5': (35.561,117.139,94.719)
O4': (35.082,119.007,93.302)
C8: (37.720,119.382,92.651)
O2': (33.375,118.233,91.060)
C6: (39.437,121.015,90.068)
C5: (38.620,120.373,91.003)
C4: (37.286,120.222,90.673)
P: (33.868,115.842,96.269)
C4': (34.803,117.600,93.493)
C2': (34.774,118.054,91.177)
C2: (37.569,121.209,88.723)
N1: (38.872,121.425,88.909)
N3: (36.690,120.622,89.533)
N6: (40.732,121.247,90.268)
N7: (38.883,119.830,92.252)
N9: (36.702,119.602,91.754)
O5': (35.044,115.892,95.192)
O3': (34.287,115.807,91.945)
Image (generated by PyMOL):
PyMOL image
show in jmol